Rv3457c - c.-112A>C
Drug resistance types
104 Sensitive
3 RR-TB
32 HR-TB
61 MDR-TB
63 Pre-XDR-TB
8 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 70 |
| lineage2.2.1 | 106 |
| lineage1.2.1.2.1 | 4 |
| lineage3 | 13 |
| lineage4.1.2.1 | 22 |
| lineage2.2.1.1 | 12 |
| La1.7.1 | 10 |
| lineage4.3.3 | 22 |
| lineage4.3.4.1 | 2 |
| lineage4.8 | 5 |
| lineage4.5 | 15 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.4.2 | 7 |
| lineage2.2.2 | 10 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage4.6.5 | 1 |
| La1.4 | 3 |
| lineage1.1.2 | 1 |
| lineage4.2.2 | 4 |
| lineage2.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3 | 2 |
| lineage4.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 324 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21700906 | Other | lineage4.9 | None | SRR28119723 | Sensitive | lineage2.2.1 | None | SRR21700810 | Sensitive | lineage4.9 | None | SRR25207047 | MDR-TB | lineage2.2.1 | None | SRR21700847 | Sensitive | lineage4.9 | None | SRR21700960 | Sensitive | lineage4.9 | None | SRR21700967 | Other | lineage4.9 | None | SRR20958105 | Sensitive | lineage4.9 | None | SRR20958085 | Sensitive | lineage4.9 | None | SRR23316607 | HR-TB | lineage1.2.1.2.1 | None | SRR23650983 | HR-TB | lineage4.9 | None | SRR26800428 | Sensitive | lineage3 | None | SRR21700845 | Sensitive | lineage4.9 | None | ERR4813258 | Sensitive | lineage4.1.2.1 | pe | SRR25207181 | XDR-TB | lineage2.2.1.1 | None | SRR21887760 | XDR-TB | lineage2.2.1 | None | SRR26800461 | Other | lineage3 | None | SRR23961517 | Other | La1.7.1 | None | SRR25207044 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700894 | Other | lineage4.9 | None | SRR21700966 | Other | lineage4.9 | None | SRR21700846 | Sensitive | lineage4.9 | None | SRR21700824 | HR-TB | lineage4.9 | None | SRR20958121 | Sensitive | lineage4.3.3 | None | SRR21700949 | Other | lineage4.9 | None | SRR23961485 | Other | La1.7.1 | None | SRR21700943 | HR-TB | lineage4.9 | None | SRR23650984 | HR-TB | lineage4.9 | None | SRR20958148 | Sensitive | lineage4.1.2.1 | None | SRR20958145 | Sensitive | lineage4.1.2.1 | None | SRR20958138 | Sensitive | lineage4.3.4.1 | None | SRR20958095 | Sensitive | lineage4.3.3 | None | SRR23316624 | HR-TB | lineage1.2.1.2.1 | None | SRR26800487 | Sensitive | lineage4.8 | None | SRR20958129 | Sensitive | lineage4.1.2.1 | None | SRR22502075 | Sensitive | lineage4.9 | None | SRR25628561 | HR-TB | lineage4.5 | None | SRR21700942 | Sensitive | lineage4.9 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | SRR26800469 | Sensitive | lineage3 | None | SRR20958112 | Sensitive | lineage4.1.2.1 | None | SRR25207066 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207053 | MDR-TB | lineage2.2.1 | None | SRR20958134 | Sensitive | lineage4.1.2.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | SRR25827752 | MDR-TB | lineage2.2.1 | None | SRR25827368 | XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR21700932 | Other | lineage4.9 | None | SRR21887712 | MDR-TB | lineage2.2.1 | None | SRR25827342 | Pre-XDR-TB | lineage4.8 | None | SRR21700853 | RR-TB | lineage4.9 | None | SRR21700803 | Other | lineage4.9 | None | SRR21700819 | HR-TB | lineage4.9 | None | SRR26800441 | Sensitive | lineage3 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958100 | Sensitive | lineage4.3.2 | None | SRR21700950 | Other | lineage4.9 | None | SRR21700946 | HR-TB | lineage4.9 | None | SRR21887679 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700957 | Other | lineage4.9 | None | SRR21700955 | Other | lineage4.9 | None | SRR25628580 | Sensitive | lineage4.5 | None | SRR26800448 | Other | lineage3 | None | SRR21700977 | Sensitive | lineage4.9 | None | SRR21700961 | Other | lineage4.9 | None | SRR21887771 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700837 | Sensitive | lineage4.9 | None | SRR26800486 | Sensitive | lineage4.1.1.3 | None | SRR21700898 | Other | lineage4.9 | None | SRR21700852 | Sensitive | lineage4.9 | None | SRR27069464 | MDR-TB | lineage2.2.1 | None | SRR28046124 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045661 | MDR-TB | lineage3.1.2.1 | None | SRR28045567 | Pre-XDR-TB | lineage3 | None | SRR28046161 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069375 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069465 | MDR-TB | lineage4.4.2 | None | SRR27069446 | Pre-XDR-TB | lineage2.2.1 | None | SRR28467070 | HR-TB | lineage2.2.1 | None | SRR27069419 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044609 | Sensitive | lineage3.1.2.1 | None | SRR27069415 | HR-TB | lineage2.2.1 | None | SRR27069417 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069410 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069466 | Pre-XDR-TB | lineage2.2.1 | None | SRR28467044 | MDR-TB | lineage2.2.2 | None | SRR28467059 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069393 | MDR-TB | lineage4.5 | None | SRR23961471 | Other | La1.7.1 | None | SRR27069441 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069366 | MDR-TB | lineage2.2.1.1 | None | SRR27069399 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700827 | HR-TB | lineage4.9 | None | SRR25207273 | MDR-TB | lineage2.2.1 | None | SRR17687254 | Sensitive | lineage2.2.1 | None | SRR25206921 | MDR-TB | lineage4.5 | None | SRR20958151 | Sensitive | lineage4.8 | None | SRR21700903 | Other | lineage4.9 | None | SRR25207179 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119763 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700941 | Sensitive | lineage4.9 | None | SRR26800454 | Sensitive | lineage4.3.4.2.1 | None | SRR20958143 | Sensitive | lineage4.1.2.1 | None | SRR25905991 | MDR-TB | lineage4.3.3 | None | SRR21700963 | Other | lineage4.9 | None | SRR25207068 | XDR-TB | lineage2.2.1.1 | None | SRR25827756 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887719 | MDR-TB | lineage2.2.1 | None | SRR23316642 | MDR-TB | lineage2.2.1 | None | SRR20958098 | Sensitive | lineage4.3.3 | None | SRR20958130 | Sensitive | lineage4.3.3;lineage4.9 | None | SRR21700815 | Other | lineage4.9 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700834 | Sensitive | lineage4.9 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR20958102 | Sensitive | lineage4.3.4.1 | None | SRR23650986 | Sensitive | lineage4.9 | None | SRR21700937 | Other | lineage4.9 | None | SRR21700805 | RR-TB | lineage4.9 | None | SRR21700841 | Sensitive | lineage4.9 | None | SRR25628575 | Pre-XDR-TB | lineage4.5 | None | SRR21887780 | MDR-TB | lineage2.2.1.1 | None | SRR21700930 | Other | lineage4.9 | None | SRR25628581 | Sensitive | lineage2.2.1.1 | None | SRR21700848 | Sensitive | lineage4.9 | None | SRR20958083 | Sensitive | lineage4.3.3 | None | SRR23961399 | Other | La1.7.1 | None | SRR26800488 | Sensitive | lineage3 | None | SRR25207064 | Pre-XDR-TB | lineage2.2.1 | None | SRR26800463 | Other | lineage4.6.5 | None | SRR23316589 | HR-TB | lineage1.2.1.2.1 | None | SRR25207318 | XDR-TB | lineage4.5 | None | SRR20958155 | Sensitive | lineage4.1.2.1 | None | SRR23316616 | HR-TB | lineage2.2.1 | None | SRR25206900 | MDR-TB | lineage4.5 | None | SRR21700850 | Sensitive | lineage4.9 | None | SRR20958090 | Sensitive | lineage4.8 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700823 | HR-TB | lineage4.9 | None | SRR21887759 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119772 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR23562878 | Other | La1.4 | None | SRR21700831 | Sensitive | lineage4.9 | None | SRR20958135 | Sensitive | lineage4.1.2.1 | None | SRR22502076 | Other | lineage4.9 | None | SRR21700916 | Sensitive | lineage4.9 | None | SRR25628560 | HR-TB | lineage4.5 | None | SRR21700857 | Sensitive | lineage4.9 | None | SRR25206905 | MDR-TB | lineage2.2.1 | None | SRR22502073 | Other | lineage4.9 | None | SRR21700971 | Other | lineage4.9 | None | SRR25827791 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887734 | MDR-TB | lineage2.2.1 | None | SRR20958074 | Sensitive | lineage4.1.2.1 | None | SRR27069457 | MDR-TB | lineage2.2.1 | None | SRR27069461 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069406 | Pre-XDR-TB | lineage4.4.2 | None | SRR28045942 | MDR-TB | lineage3 | None | SRR28467066 | HR-TB | lineage4.5 | None | SRR27069429 | MDR-TB | lineage2.2.1 | None | SRR27069367 | XDR-TB | lineage2.2.1 | None | SRR28119813 | Sensitive | lineage2.2.1 | None | SRR27069454 | Other | lineage2.2.1 | None | SRR27069445 | Other | lineage2.2.1 | None | SRR27069407 | MDR-TB | lineage2.2.1 | None | SRR27069451 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069370 | MDR-TB | lineage2.2.1 | None | SRR28045660 | HR-TB | lineage4.1.1.3 | None | SRR28119731 | Other | lineage2.2.1 | None | SRR27069364 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119821 | Sensitive | lineage2.2.1 | None | SRR27069365 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069456 | MDR-TB | lineage2.2.1.1 | None | SRR27069428 | MDR-TB | lineage2.2.1 | None | SRR28044920 | Sensitive | lineage3 | None | SRR28467058 | HR-TB | lineage2.2.2 | None | SRR27069455 | Sensitive | lineage2.2.1.1 | None | SRR27069369 | MDR-TB | lineage2.2.1 | None | SRR28046341 | Sensitive | lineage3 | None | SRR20958093 | Sensitive | lineage4.3.3 | None | SRR20958157 | Sensitive | lineage4.1.2.1 | None | SRR20958109 | Sensitive | lineage4.3.3 | None | SRR21887714 | Pre-XDR-TB | lineage2.2.1 | None | SRR25460168 | Sensitive | lineage4.3.3 | None | SRR20958103 | Sensitive | lineage4.3.3 | None | SRR23316612 | HR-TB | lineage2.2.1 | None | SRR20958113 | Sensitive | lineage4.3.3 | None | SRR21887785 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207317 | MDR-TB | lineage4.5 | None | SRR25207304 | XDR-TB | lineage2.2.1 | None | SRR23961480 | Other | La1.7.1 | None | SRR25524713 | Sensitive | lineage4.9 | None | SRR25628571 | Sensitive | lineage4.5 | None | ERR4813556 | HR-TB | lineage4.3.3 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR21700851 | Sensitive | lineage4.9 | None | SRR25515234 | Sensitive | lineage2.2.1 | None | SRR21700896 | Other | lineage4.9 | None | SRR20958088 | Sensitive | lineage4.1.2.1 | None | SRR20958094 | Sensitive | lineage4.1.2.1 | None | SRR25524715 | Sensitive | lineage4.9 | None | SRR25207280 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25206892 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR20958150 | Sensitive | lineage4.3.3 | None | SRR20958122 | Sensitive | lineage4.3.3 | None | SRR20958156 | Sensitive | lineage4.1.2.1 | None | SRR26800439 | Sensitive | lineage3 | None | SRR25207183 | MDR-TB | lineage2.2.1 | None | SRR28119729 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958096 | Sensitive | lineage4.3.3 | None | SRR21887766 | MDR-TB | lineage2.2.1 | None | SRR20958078 | Sensitive | lineage4.1.2.1 | None | SRR21700893 | Other | lineage4.9 | None | SRR21700918 | Other | lineage4.9 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887674 | MDR-TB | lineage2.2.1 | None | SRR23316640 | HR-TB | lineage2.2.1 | None | SRR26800471 | Sensitive | lineage1.1.2 | None | SRR23316613 | HR-TB | lineage2.2.1 | None | SRR26442320 | Sensitive | lineage4.1.2.1 | None | SRR21700813 | Other | lineage4.9 | None | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR26800491 | Sensitive | lineage4.3.4.2.1 | None | SRR21700890 | Other | lineage4.9 | None | SRR25905994 | MDR-TB | lineage4.3.3 | None | SRR25905990 | MDR-TB | lineage4.3.3 | None | SRR23316625 | Sensitive | lineage2.2.1 | None | SRR25628562 | HR-TB | lineage4.4.2 | None | SRR23316620 | HR-TB | lineage2.2.1 | None | SRR25524714 | Sensitive | lineage4.9 | None | SRR25628563 | HR-TB | lineage4.4.2 | None | SRR23961460 | Other | La1.7.1 | None | SRR21700904 | Other | lineage4.9 | None | SRR21700969 | Other | lineage4.9 | None | SRR23562879 | Other | La1.4 | None | SRR21887724 | Pre-XDR-TB | lineage2.2.1 | None | SRR21700914 | Other | lineage4.9 | None | SRR25524704 | Sensitive | lineage4.9 | None | SRR25207194 | Pre-XDR-TB | lineage2.2.1 | None | SRR20958086 | Sensitive | lineage4.3.3 | None | SRR25628591 | MDR-TB | lineage4.2.2 | None | SRR25206913 | Pre-XDR-TB | lineage2.2.2 | None | SRR20958091 | Sensitive | lineage4.1.2.1 | None | SRR23562881 | Other | La1.4 | None | SRR25827782 | Pre-XDR-TB | lineage3 | None | SRR25206889 | Pre-XDR-TB | lineage2.1 | None | SRR21887654 | MDR-TB | lineage2.2.1 | None | SRR21700972 | Other | lineage4.9 | None | SRR26442319 | Sensitive | lineage4.1.2.1 | None | SRR20958144 | Sensitive | lineage4.3.3 | None | SRR25207192 | MDR-TB | lineage4.5 | None | SRR21887751 | MDR-TB | lineage4.5 | None | SRR23961472 | Other | La1.7.1 | None | SRR21700976 | Sensitive | lineage4.9 | None | SRR23961432 | Other | La1.7.1 | None | SRR28119840 | RR-TB | lineage2.2.1 | None | SRR25207043 | MDR-TB | lineage2.2.1 | None | SRR28119785 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887705 | MDR-TB | lineage2.2.1 | None | SRR20958140 | Sensitive | lineage4.3.3 | None | SRR25207048 | MDR-TB | lineage4.5 | None | SRR20958114 | Sensitive | lineage4.3.3 | None | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR20958082 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR21700917 | Other | lineage4.9 | None | SRR21887731 | MDR-TB | lineage2.2.1 | None | SRR21887716 | MDR-TB | lineage4.2.2 | None | SRR20958119 | Sensitive | lineage4.1.2.1 | None | SRR23961477 | Other | La1.7.1 | None | SRR21887718 | Sensitive | lineage2.2.1 | None | SRR26800478 | Other | lineage3 | None | SRR25827541 | Sensitive | lineage3.1.2.1 | None | SRR25827620 | XDR-TB | lineage2.2.1 | None | SRR20958128 | Sensitive | lineage4.3.3;lineage4.9 | None | SRR21700833 | Sensitive | lineage4.9 | None | SRR20958097 | Sensitive | lineage4.8 | None | SRR20958160 | HR-TB | lineage4.3.3 | None | SRR25827670 | MDR-TB | lineage4.3.3 | None | SRR28119714 | Other | lineage2.2.1 | None | SRR26800438 | Sensitive | lineage4.1.2.1 | None | SRR21700891 | Other | lineage4.9 | None | SRR17658000 | Sensitive | lineage4.1.2.1 | None | SRR25207045 | MDR-TB | lineage4.4.2 | None | SRR21700840 | Sensitive | lineage4.9 | None | SRR25207186 | MDR-TB | lineage2.2.1 | None | SRR21887651 | Pre-XDR-TB | lineage2.2.1 | None | SRR17657931 | MDR-TB | lineage2.2.2 | None | SRR23316623 | Sensitive | lineage4.4.2 | None | SRR20958077 | Sensitive | lineage4.1.2.1 | None | SRR25206899 | MDR-TB | lineage2.2.1 | None | SRR27069376 | MDR-TB | lineage2.2.1 | None | SRR28351376 | MDR-TB | lineage4.2.1 | None | SRR23961467 | Other | La1.7.1 | None | SRR28046103 | Other | lineage1.1.3 | None | SRR28046141 | Pre-XDR-TB | lineage4.4 | None | SRR28467062 | MDR-TB | lineage2.2.1 | None | SRR27069420 | Pre-XDR-TB | lineage4.2.2 | None | SRR28119759 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069463 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069422 | Pre-XDR-TB | lineage2.2.1 | None | SRR28467069 | HR-TB | lineage2.2.1 | None | SRR28467067 | MDR-TB | lineage2.2.2 | None | SRR28467047 | HR-TB | lineage4.5 | None | SRR27069389 | MDR-TB | lineage4.4.2 | None | SRR28044352 | MDR-TB | lineage2.2.1 | None | SRR27069387 | MDR-TB | lineage2.2.1 | None | SRR28045644 | Sensitive | lineage1.1.3 | None | SRR28467055 | HR-TB | lineage2.2.1 | None | SRR28467038 | HR-TB | lineage2.2.1 | None | SRR27069421 | Pre-XDR-TB | lineage2.2.2 | None | SRR27069450 | Pre-XDR-TB | lineage2.2.1 | None | SRR28465663 | Sensitive | lineage1.2.1.2.1 | None | SRR28467060 | HR-TB | lineage2.2.1 | None | SRR27069416 | MDR-TB | lineage4.2.2 | None | SRR27069459 | MDR-TB | lineage2.2.1 | None | SRR27069452 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069372 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069418 | MDR-TB | lineage2.2.1.1 | None |
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