lineage | Count |
---|---|
La1.8.1 | 3 |
lineage2.2.1 | 60 |
lineage4.1.2.1 | 14 |
lineage4.2.2 | 2 |
lineage4.3.2 | 4 |
lineage4.3.3 | 12 |
lineage4 | 1 |
lineage4.3 | 2 |
lineage2.2.1.1 | 4 |
lineage4.3.2.1 | 3 |
lineage4.3.4.1 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.2 | 3 |
lineage4.1.1.3 | 2 |
lineage4.3.4.2.1;lineage4.1.1.3 | 1 |
lineage2.2.2;lineage2.2.1 | 1 |
La1.4 | 3 |
lineage4.5 | 1 |
lineage3 | 1 |
lineage1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 120 |
ID | Drug resistance | Lineage | Country iso2 | ERR3439394 | Other | La1.8.1 | None | ERR2517541 | Sensitive | lineage2.2.1 | nl | ERR4830493 | MDR-TB | lineage2.2.1 | None | ERR10225532 | Sensitive | lineage4.1.2.1 | None | ERR4827835 | MDR-TB | lineage2.2.1 | None | DRR189093 | Sensitive | lineage4.2.2 | None | ERR11044553 | Sensitive | lineage2.2.1 | None | ERR4811978 | HR-TB | lineage4.1.2.1 | pe | ERR4178291 | Sensitive | lineage4.3.2 | None | ERR4187747 | Other | La1.8.1 | None | ERR4811974 | Sensitive | lineage2.2.1 | pe | ERR4188271 | Other | La1.8.1 | None | ERR4811968 | Sensitive | lineage2.2.1 | pe | ERR4812012 | Sensitive | lineage4.1.2.1 | pe | ERR4811981 | MDR-TB | lineage4.3.3 | pe | ERR4812002 | Sensitive | lineage2.2.1 | pe | ERR4812017 | Sensitive | lineage4.1.2.1 | pe | ERR4812068 | Sensitive | lineage4.3.3 | None | ERR4812040 | Sensitive | lineage4.3.3 | pe | ERR4812030 | Sensitive | lineage4.3.2 | pe | ERR4812070 | Sensitive | lineage2.2.1 | None | ERR4812197 | Sensitive | lineage4.3.2 | pe | ERR4812086 | Sensitive | lineage4.1.2.1 | None | ERR4812162 | HR-TB | lineage4.1.2.1 | pe | ERR4812266 | Sensitive | lineage4 | None | ERR4812253 | Sensitive | lineage4.3 | pe | ERR4812239 | Sensitive | lineage2.2.1 | pe | ERR4812394 | Sensitive | lineage4.3 | pe | ERR4812507 | Sensitive | lineage4.1.2.1 | pe | ERR751871 | Sensitive | lineage2.2.1.1 | th | ERR6865895 | Sensitive | lineage4.3.2 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR4812582 | Sensitive | lineage2.2.1 | pe | ERR8699829 | Sensitive | lineage2.2.1.1 | None | ERR8699798 | Sensitive | lineage4.3.2.1 | None | ERR8773825 | HR-TB | lineage4.3.3 | None | ERR8975595 | HR-TB | lineage4.3.4.1 | None | ERR11050046 | Sensitive | lineage4.4.1.1 | None | ERR8975744 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975675 | Sensitive | lineage4.3.2.1 | None | ERR9029869 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9029864 | MDR-TB | lineage4.3.3 | None | SRR10808937 | Sensitive | lineage2.2.1 | None | ERR9992679 | MDR-TB | lineage4.3.2.1 | None | ERR9992752 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993068 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993088 | MDR-TB | lineage4.1.1.3 | None | SRR10851702 | Sensitive | lineage4.3.3 | None | SRR10869004 | MDR-TB | lineage4.3.4.2.1;lineage4.1.1.3 | None | SRR11349180 | MDR-TB | lineage2.2.1 | None | SRR21277348 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR11067644 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | ERR11068961 | MDR-TB | lineage2.2.1 | None | SRR21279399 | Sensitive | lineage2.2.1.1 | None | SRR23861716 | HR-TB | lineage4.3.3 | None | ERR11081041 | MDR-TB | lineage2.2.1 | None | ERR11081371 | MDR-TB | lineage2.2.1 | None | SRR23562879 | Other | La1.4 | None | SRR23562878 | Other | La1.4 | None | SRR23938708 | MDR-TB | lineage2.2.1 | None | SRR23562881 | Other | La1.4 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887698 | MDR-TB | lineage2.2.1 | None | SRR21887705 | MDR-TB | lineage2.2.1 | None | SRR21887782 | Sensitive | lineage2.2.1 | None | SRR21887724 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887771 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR21887751 | MDR-TB | lineage4.5 | None | SRR21887651 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887654 | MDR-TB | lineage2.2.1 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR21887780 | MDR-TB | lineage2.2.1.1 | None | SRR21887683 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887716 | MDR-TB | lineage4.2.2 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887714 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887719 | MDR-TB | lineage2.2.1 | None | SRR21887734 | MDR-TB | lineage2.2.1 | None | SRR21887731 | MDR-TB | lineage2.2.1 | None | SRR21887712 | MDR-TB | lineage2.2.1 | None | SRR21887759 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887742 | MDR-TB | lineage2.2.1 | None | SRR21887679 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887674 | MDR-TB | lineage2.2.1 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887718 | RR-TB | lineage2.2.1 | None | SRR21887706 | Pre-XDR-TB | lineage2.2.2 | None | SRR21887766 | MDR-TB | lineage2.2.1 | None | SRR21887761 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887785 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887760 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887762 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813141 | Pre-XDR-TB | lineage4.3.3 | None | ERR4812773 | HR-TB | lineage4.1.2.1 | None | ERR4812779 | MDR-TB | lineage4.1.2.1 | None | ERR4812901 | Sensitive | lineage4.1.1.3 | None | SRR23691426 | Sensitive | lineage2.2.1 | None | SRR23691438 | Other | lineage2.2.1 | None | ERR4813067 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR4813258 | Sensitive | lineage4.1.2.1 | pe | ERR4813246 | Sensitive | lineage2.2.1 | pe | ERR4813445 | Pre-XDR-TB | lineage4.3.3 | None | ERR4813269 | Other | lineage4.1.2.1 | pe | ERR2179853 | Other | lineage3 | None | ERR4813559 | HR-TB | lineage4.3.3 | None | ERR4813595 | MDR-TB | lineage4.3.3 | None | ERR4813556 | HR-TB | lineage4.3.3 | None | ERR4820717 | Other | lineage1.1.3 | None | ERR2184573 | Sensitive | lineage2.2.1 | pe |
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