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SRA data
Rv3596c
- c.495G>A
Drug resistance types
40 Sensitive
4 RR-TB
29 HR-TB
19 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.2
54
M.canetti;lineage2.1;lineage4.9
8
lineage3
5
M.canetti;lineage2.1;lineage4.9;lineage6.3
3
lineage2.1;lineage4.9
3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
3
lineage2.1;lineage4.1.1.1;lineage6.3
2
lineage2.2.1
2
lineage2.1;lineage4.9;lineage6.3;lineage8
1
M.canetti;lineage2.1;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
99
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11068141
Sensitive
lineage1.1.2
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR13261291
Sensitive
lineage1.1.2
None
ERR13266431
Sensitive
lineage1.1.2
None
ERR13289561
Sensitive
lineage3
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1873396
Pre-XDR-TB
M.canetti;lineage2.2
None
ERR2512415
Sensitive
lineage1.1.2
gb
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