TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.870C>T
Drug resistance types
6 Sensitive
2 RR-TB
1 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage2.2.1
2
lineage4.1
2
lineage4.8
1
lineage4.1;lineage6.3.1
1
lineage4.9
1
lineage4.3.3
1
lineage4.8.1
1
lineage4.1.3
1
lineage4.1;lineage4.9
1
lineage2.2.2
1
Showing 1 to 10 of 11 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
13
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR4796472
Pre-XDR-TB
lineage2.2.1
None
ERR502470
RR-TB
lineage4.9
None
ERR9786076
Sensitive
lineage3
None
SRR1049959
Sensitive
lineage4.1;lineage6.3.1
None
SRR1049971
Sensitive
lineage4.1
None
SRR1049975
MDR-TB
lineage4.1.3
None
SRR18002874
MDR-TB
lineage2.2.1
None
SRR18002998
Pre-XDR-TB
lineage2.2.2
None
SRR5153091
HR-TB
lineage4.3.3
None
SRR6832221
Sensitive
lineage4.8
None
Showing 1 to 10 of 13 entries
Previous
1
2
Next