TB-Profiler
Home
Upload
SRA data
Rv3795
- c.-252C>T
Drug resistance types
0 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
4 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
M.canetti;lineage2.2
2
La3;lineage2.1;lineage4.9
1
La3;lineage4.9
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
1
La1.7;M.canetti;lineage4.9
1
lineage2.1;lineage4.9;lineage6.3
1
lineage4
1
Showing 1 to 8 of 8 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
ERR4831545
XDR-TB
M.canetti;lineage2.2
None
ERR736835
HR-TB
La1.7;M.canetti;lineage4.9
None
ERR7911670
XDR-TB
M.canetti;lineage2.2
None
ERR9786843
Other
None
SRR23961558
Other
lineage2.1;lineage4.9;lineage6.3
None
SRR6045053
Other
lineage4
None
SRR6046644
HR-TB
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
None
Showing 1 to 9 of 9 entries
Previous
1
Next