SRR19428566
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR16370380
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR16370614
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18054810
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2101482
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR2101360
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21747064
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2101574
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR22179507
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22424827
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR22424804
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR9806802
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR11081547
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR9806800
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10610164
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR9806812
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10610161
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9806894
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9806949
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR553216
|
MDR-TB
|
lineage4.1.2.1
|
sz
|
ERR10610314
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21887699
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6207282
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR553053
|
MDR-TB
|
lineage4.1.2.1
|
sz
|
SAMN02403630
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR4812813
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR4812729
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SAMN02053783
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR1723760
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR4034387
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR3732648
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR4034386
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SAMN02585961
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
SRR4034389
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR4034388
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR4034390
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR4034393
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2510683
|
Pre-XDR-TB
|
lineage4.1.2
|
it
|
ERR4816926
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510587
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR4034391
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2503407
|
MDR-TB
|
lineage1.2.1.2.1
|
fi
|
ERR2515528
|
Pre-XDR-TB
|
lineage4.9.1
|
za
|
ERR2516884
|
MDR-TB
|
lineage4.2.2
|
gb
|
ERR2515361
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2516924
|
MDR-TB
|
lineage4.2.2
|
gb
|
ERR2510133
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SAMN02585972
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515264
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515542
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515982
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515583
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515667
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515739
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515588
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
SAMN03246485
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR2516017
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR2516023
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515199
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2516045
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2516091
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR2515135
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR4821889
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4820994
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3275768
|
MDR-TB
|
lineage2.2.1
|
nl
|
SAMN02053753
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR2653099
|
Pre-XDR-TB
|
lineage4.3.4
|
None
|
SRR6896411
|
MDR-TB
|
lineage4.1.2
|
None
|
ERR4829976
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4828807
|
Pre-XDR-TB
|
lineage4.1.2
|
None
|
SRR6458443
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831595
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6896197
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6896525
|
Pre-XDR-TB
|
lineage4.1.2;lineage2.2.1
|
None
|
SRR6896523
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6982216
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6964482
|
RR-TB
|
lineage3
|
None
|
SRR6824631
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR9971236
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR6824675
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR3132156
|
MDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR9971281
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR9971367
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR9971345
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR832981
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR833032
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR833038
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR833075
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SAMN02403629
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SRR833131
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR833194
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR7517787
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR833128
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR9971071
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR7829587
|
Pre-XDR-TB
|
lineage4.1.2
|
None
|
SRR9971101
|
XDR-TB
|
lineage4.1.2.1
|
None
|
SRR9971183
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR1034681
|
MDR-TB
|
lineage4.1.2.1
|
co
|
ERR10748250
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR10748163
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR1063895
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR10748222
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4195285
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3256210
|
MDR-TB
|
lineage1.2.1.2.1
|
ph
|
ERR3287503
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4809252
|
MDR-TB
|
lineage4.1.2.1
|
za
|
ERR4553746
|
MDR-TB
|
|
None
|
ERR4797075
|
HR-TB
|
lineage1.1.2
|
in
|
ERR7911152
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR7737696
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR779876
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4810969
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4812587
|
Other
|
lineage4.1.2.1
|
None
|
ERR5918116
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR5987408
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737652
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737700
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7911440
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR7911176
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR8665696
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7911682
|
Pre-XDR-TB
|
lineage4.1.2.1
|
za
|
ERR8025355
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR8665655
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665656
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665697
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665833
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665744
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8975760
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR8975696
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR8665967
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8976096
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992645
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9030490
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR9992674
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992702
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992670
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992678
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992692
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992693
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992701
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992907
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9992854
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9993017
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9993034
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR10315618
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9993086
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR9993148
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR10306003
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993049
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR10306005
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10315617
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR10315628
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1173873
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR11342648
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR11715723
|
MDR-TB
|
lineage2.1
|
None
|
SRR1173415
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR1173866
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR10315629
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR11349201
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1173245
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR1175483
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175480
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175497
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175498
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175522
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1180181
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175503
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175526
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1175488
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1180276
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1181171
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1180419
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1181092
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1181284
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1181279
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1183124
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR15014728
|
MDR-TB
|
lineage3
|
None
|
SRR13232405
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232493
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232492
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232548
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232593
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232674
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR15506912
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|