lineage | Count |
---|---|
lineage4.4.1.1 | 1 |
lineage4.3.3 | 2 |
lineage4.1.1 | 1 |
lineage2.2.1 | 57 |
lineage4.4.1.1;lineage2.2.1 | 1 |
lineage4.3.2 | 1 |
La1.4 | 4 |
lineage4.9 | 1 |
lineage2.2.1.1 | 1 |
lineage4.5 | 1 |
lineage4.8 | 7 |
lineage4.3 | 1 |
lineage4.1.2.1 | 2 |
lineage2.1 | 1 |
lineage4.7 | 1 |
La1.2.BCG | 2 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | SRR22528528 | MDR-TB | lineage4.4.1.1 | None | SRR22528537 | MDR-TB | lineage4.3.3 | None | SRR22528522 | MDR-TB | lineage4.1.1 | None | SRR21887673 | MDR-TB | lineage2.2.1 | None | SRR22528542 | MDR-TB | lineage4.4.1.1;lineage2.2.1 | None | SRR22528554 | Sensitive | lineage4.3.2 | None | SRR22528577 | MDR-TB | lineage4.3.3 | None | SRR23562880 | Other | La1.4 | None | SRR23562881 | Other | La1.4 | None | SRR21887681 | Pre-XDR-TB | lineage2.2.1 | None | SRR23082545 | Sensitive | lineage4.9 | None | SRR23562878 | Other | La1.4 | None | SRR23562879 | Other | La1.4 | None | SRR21887670 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887667 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887723 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887698 | MDR-TB | lineage2.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR21887763 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887735 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887768 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887773 | MDR-TB | lineage2.2.1 | None | SRR21887771 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887782 | Sensitive | lineage2.2.1 | None | SRR21887774 | MDR-TB | lineage2.2.1 | None | SRR21887778 | MDR-TB | lineage2.2.1 | None | SRR21887772 | MDR-TB | lineage2.2.1 | None | SRR21887783 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887651 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887780 | MDR-TB | lineage2.2.1.1 | None | SRR21887661 | MDR-TB | lineage2.2.1 | None | SRR21887677 | MDR-TB | lineage2.2.1 | None | SRR21887668 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887664 | MDR-TB | lineage2.2.1 | None | SRR21887678 | MDR-TB | lineage2.2.1 | None | SRR21887715 | MDR-TB | lineage2.2.1 | None | SRR21887714 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887704 | MDR-TB | lineage2.2.1 | None | SRR21887711 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887712 | MDR-TB | lineage2.2.1 | None | SRR21887730 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887759 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887731 | MDR-TB | lineage2.2.1 | None | SRR21887781 | MDR-TB | lineage2.2.1 | None | SRR21887742 | MDR-TB | lineage2.2.1 | None | SRR21887769 | MDR-TB | lineage2.2.1 | None | SRR21887788 | MDR-TB | lineage2.2.1 | None | SRR21887784 | MDR-TB | lineage2.2.1 | None | SRR21887754 | MDR-TB | lineage4.5 | None | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887682 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887679 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887674 | MDR-TB | lineage2.2.1 | None | SRR21887680 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887684 | MDR-TB | lineage2.2.1 | None | SRR21887694 | MDR-TB | lineage2.2.1 | None | SRR21887753 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887717 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887729 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887728 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887708 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887760 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887776 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887762 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887770 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887777 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887785 | Pre-XDR-TB | lineage2.2.1 | None | ERR2228942 | Sensitive | lineage4.8 | None | ERR4813510 | Sensitive | lineage4.3 | None | ERR4811978 | HR-TB | lineage4.1.2.1 | pe | ERR2228948 | Sensitive | lineage4.8 | None | ERR1949952 | Sensitive | lineage4.8 | None | ERR1950012 | Sensitive | lineage4.8 | None | ERR2228806 | Sensitive | lineage4.8 | None | SRR6339664 | MDR-TB | lineage2.1 | None | ERR2229268 | Sensitive | lineage4.8 | dk | ERR2228788 | Sensitive | lineage4.8 | None | ERR4812132 | Sensitive | lineage2.2.1 | None | ERR4812508 | Sensitive | lineage4.1.2.1 | pe | SRR11033614 | Sensitive | lineage4.7 | None | SRR13399342 | Other | La1.2.BCG | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR13399337 | Other | La1.2.BCG | None | SRR16295787 | Other | lineage2.2.1 | None |
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