lineage | Count |
---|---|
lineage4 | 4 |
lineage4.1.2.1.1 | 2 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 9 |
lineage3 | 2 |
lineage4.1.2.1 | 4 |
lineage4.6.1.2 | 1 |
lineage2.2.2 | 1 |
lineage4.8 | 2 |
lineage4.6.1.1 | 2 |
lineage2.2.1.1 | 2 |
lineage2.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.4.1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 33 |
ID | Drug resistance | Lineage | Country iso2 | ERR2516534 | Pre-XDR-TB | lineage4 | pe | ERR845327 | MDR-TB | lineage4.1.2.1.1 | None | SRR1166253 | MDR-TB | lineage4.4.1.1 | ro | SRR671843 | MDR-TB | lineage2.2.1 | cn | ERR040140 | Pre-XDR-TB | lineage3 | ug | SRR023452 | RR-TB | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184503 | Sensitive | lineage4.1.2.1 | pe | ERR2516129 | MDR-TB | lineage4.1.2.1 | es | SRR5709884 | Pre-XDR-TB | lineage2.2.1 | th | ERR2707073 | RR-TB | lineage4.8 | cd | ERR1199145 | MDR-TB | lineage4.6.1.1 | ug | SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th | ERR2510271 | MDR-TB | lineage3 | pk | ERR3287517 | MDR-TB | lineage4 | None | ERR1035097 | Pre-XDR-TB | lineage2.1 | vn | ERR760886 | MDR-TB | lineage4.1.2.1.1 | ar | ERR1679656 | MDR-TB | lineage4.6.2.2 | ng | ERR2516645 | Pre-XDR-TB | lineage4 | pe | SAMN02419611 | Pre-XDR-TB | lineage2.2.1 | by | SRR2024890 | MDR-TB | lineage2.2.1.1 | cn | SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671844 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671852 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za | ERR2516433 | Sensitive | lineage4.1.2.1 | pe | SRR5709826 | Pre-XDR-TB | lineage2.2.1 | th | ERR6358848 | MDR-TB | lineage4.6.1.1 | None | ERR2516430 | Pre-XDR-TB | lineage4 | pe | ERR3014580 | MDR-TB | lineage4.8 | tn | SAMN02419634 | Pre-XDR-TB | lineage2.2.1 | by |
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