lineage | Count |
---|---|
lineage4.1.2.1 | 20 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 37 |
lineage4.8 | 6 |
lineage4.1.1.3 | 1 |
lineage4.4.2 | 1 |
lineage3 | 7 |
lineage2.2.1.1 | 3 |
lineage4 | 5 |
lineage4.1.2 | 1 |
lineage2.2.2 | 8 |
lineage4.2.1 | 3 |
lineage4.6.1.2 | 5 |
lineage4.4.1.1.1 | 3 |
lineage4.6.2.2 | 1 |
lineage4.6.1.1 | 3 |
lineage4.1.1.1 | 1 |
lineage4.1.3 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.7 | 2 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 111 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR10680210 | RR-TB | lineage4.1.2.1 | None |
SRR1166253 | MDR-TB | lineage4.4.1.1 | ro |
SRR023453 | Sensitive | lineage4.1.2.1 | None |
SRR16156803 | Pre-XDR-TB | lineage2.2.1 | None |
SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn |
ERR13261364 | Pre-XDR-TB | lineage4.8 | None |
ERR8025605 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28045021 | Pre-XDR-TB | lineage4.1.1.3 | None |
SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None |
SRR15316185 | MDR-TB | lineage4.4.2 | None |
SAMN02419611 | Pre-XDR-TB | lineage2.2.1 | by |
ERR040140 | Pre-XDR-TB | lineage3 | ug |
SRR26937023 | MDR-TB | lineage2.2.1 | None |
SRR1163021 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21887695 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2516129 | MDR-TB | lineage4.1.2.1 | es |
SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th |
SRR1173334 | MDR-TB | lineage3 | None |
ERR13260234 | MDR-TB | lineage2.2.1 | None |
SRR28045561 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2516433 | Sensitive | lineage4.1.2.1 | pe |
ERR3273155 | MDR-TB | lineage4.1.2.1 | None |
ERR3014580 | MDR-TB | lineage4.8 | tn |
ERR3287517 | MDR-TB | lineage4 | None |
SRR27107262 | MDR-TB | lineage2.2.1 | None |
SRR26558641 | MDR-TB | lineage4.1.2 | None |
ERR2516645 | Pre-XDR-TB | lineage4 | pe |
ERR6866426 | Sensitive | lineage4.8 | None |
ERR867522 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2516534 | Pre-XDR-TB | lineage4 | pe |
SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284172 | MDR-TB | lineage2.2.2 | None |
ERR5865168 | MDR-TB | lineage4.2.1 | None |
SRR28393557 | Sensitive | lineage4.1.2.1 | None |
SRR1172071 | Pre-XDR-TB | lineage2.2.1 | None |
SRR25827478 | MDR-TB | lineage4.8 | None |
ERR2653230 | RR-TB | lineage4.1.2.1 | None |
ERR11081043 | Pre-XDR-TB | lineage4.1.2.1 | None |
SRR6964636 | MDR-TB | lineage3 | None |
SRR1049582 | MDR-TB | lineage4.6.1.2 | None |
SRR28046333 | MDR-TB | lineage3 | None |
SRR1140936 | Pre-XDR-TB | lineage4.4.1.1.1 | None |
ERR1679656 | MDR-TB | lineage4.6.2.2 | ng |
ERR2707073 | RR-TB | lineage4.8 | cd |
SRR28467041 | Pre-XDR-TB | lineage2.2.2 | None |
SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None |
ERR1199145 | MDR-TB | lineage4.6.1.1 | ug |
ERR4024962 | Sensitive | lineage4.1.2.1 | None |
SRR28393546 | MDR-TB | lineage4.1.2.1 | None |
SRR5709826 | Pre-XDR-TB | lineage2.2.1 | th |
ERR10680207 | MDR-TB | lineage4.1.2.1 | None |
SRR1140712 | MDR-TB | lineage4.6.1.2 | None |
SAMN02419634 | Pre-XDR-TB | lineage2.2.1 | by |
SRR1163202 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10379971 | MDR-TB | lineage4.2.1 | None |
SRR023452 | RR-TB | lineage4.1.2.1 | None |
SAMN02380990 | MDR-TB | lineage4.6.1.2 | None |
SRR1169119 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11972445 | MDR-TB | lineage4.1.1.1 | None |
ERR10680000 | MDR-TB | lineage4.1.3 | None |
SRR29231805 | RR-TB | lineage4.8 | None |
SRR29017348 | MDR-TB | lineage4.1.2.1 | None |
ERR987781 | MDR-TB | lineage4.6.1.1 | None |
SRR14802277 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2510271 | MDR-TB | lineage3 | pk |
ERR5865169 | MDR-TB | lineage4.2.1 | None |
ERR11083149 | MDR-TB | lineage2.2.2 | None |
SAMN02360590 | MDR-TB | lineage2.2.2 | None |
SRR1013633 | MDR-TB | lineage2.2.2 | None |
SRR1013634 | MDR-TB | lineage2.2.2 | None |
SRR1049005 | RR-TB | lineage2.2.2 | None |
SRR6964653 | MDR-TB | lineage3 | None |
ERR760886 | MDR-TB | lineage4.1.2.1.1 | ar |
SRR28435003 | MDR-TB | lineage2.2.1 | None |
SRR2024890 | MDR-TB | lineage2.2.1.1 | cn |
SRR1163392 | Pre-XDR-TB | lineage2.2.1 | None |
SRR671844 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR6458413 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10828194 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10808504 | Sensitive | lineage4.1.2.1 | None |
ERR2516430 | Pre-XDR-TB | lineage4 | pe |
ERR5865764 | MDR-TB | lineage2.2.1 | None |
ERR6358848 | MDR-TB | lineage4.6.1.1 | None |
ERR13285092 | Pre-XDR-TB | lineage4.1.2.1 | None |
ERR6866445 | Sensitive | lineage4.1.2.1 | None |
SRR29273854 | Pre-XDR-TB | lineage4.7 | None |
ERR3639775 | MDR-TB | lineage2.2.2 | None |
SRR1169033 | Pre-XDR-TB | lineage2.2.1 | None |
ERR867532 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13289264 | XDR-TB | lineage4.4.1.1.1 | None |
ERR4195603 | MDR-TB | lineage4.1.2.1 | None |
SRR1062880 | MDR-TB | lineage4.6.1.2 | None |
SRR11662323 | Pre-XDR-TB | lineage2.2.1.1 | None |
SRR1172230 | Pre-XDR-TB | lineage2.2.1 | None |
SRR30180327 | MDR-TB | lineage2.2.1 | None |
SRR1174282 | MDR-TB | lineage3 | None |
SRR1049581 | MDR-TB | lineage4.6.1.2 | None |
SRR29273911 | Pre-XDR-TB | lineage4.7 | None |
ERR4195430 | MDR-TB | lineage4.1.2.1 | None |
ERR2184503 | Sensitive | lineage4.1.2.1 | pe |
ERR1035097 | Pre-XDR-TB | lineage2.1 | vn |
SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865765 | MDR-TB | lineage2.2.1 | None |
SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za |
SRR29539086 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28394026 | Pre-XDR-TB | lineage4 | None |
SRR28434983 | MDR-TB | lineage2.2.1 | None |
SRR1163332 | Pre-XDR-TB | lineage2.2.1 | None |
SRR5709884 | Pre-XDR-TB | lineage2.2.1 | th |
SRR671843 | MDR-TB | lineage2.2.1 | cn |
ERR6865361 | Sensitive | lineage4.1.2.1 | None |