Rv3806c - p.Ser173Ala
Drug resistance types
9 Sensitive
3 RR-TB
0 HR-TB
43 MDR-TB
37 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.6.1.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage2.2.2 | 7 |
| lineage2.2.1 | 30 |
| lineage4.4.1.1.1 | 2 |
| lineage4 | 5 |
| lineage4.1.1.3 | 1 |
| lineage3 | 5 |
| lineage4.1.2.1 | 17 |
| lineage4.4.2 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 4 |
| lineage4.2.1 | 3 |
| lineage4.1.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 25 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26558641 | MDR-TB | lineage4.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR987781 | MDR-TB | lineage4.6.1.1 | None | SRR2024890 | MDR-TB | lineage2.2.1.1 | cn | ERR760886 | MDR-TB | lineage4.1.2.1.1 | ar | ERR11083149 | MDR-TB | lineage2.2.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350479 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR28394026 | Pre-XDR-TB | lineage4 | None | SRR28045561 | Pre-XDR-TB | lineage2.2.1 | None | SRR28435003 | MDR-TB | lineage2.2.1 | None | SRR28467041 | Pre-XDR-TB | lineage2.2.2 | None | SRR28045021 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2510271 | MDR-TB | lineage3 | pk | ERR4024962 | Sensitive | lineage4.1.2.1 | None | ERR6865361 | Sensitive | lineage4.1.2.1 | None | SRR1013634 | MDR-TB | lineage2.2.2 | None | SRR16156803 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195430 | MDR-TB | lineage4.1.2.1 | None | ERR8025605 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163202 | Pre-XDR-TB | lineage2.2.1 | None | SRR671843 | MDR-TB | lineage2.2.1 | cn | SRR1013633 | MDR-TB | lineage2.2.2 | None | SRR26937023 | MDR-TB | lineage2.2.1 | None | SRR11662323 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15316185 | MDR-TB | lineage4.4.2 | None | ERR4195603 | MDR-TB | lineage4.1.2.1 | None | SRR10828194 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516129 | MDR-TB | lineage4.1.2.1 | es | ERR1199145 | MDR-TB | lineage4.6.1.1 | ug | ERR3273155 | MDR-TB | lineage4.1.2.1 | None | ERR5865764 | MDR-TB | lineage2.2.1 | None | ERR1035097 | Pre-XDR-TB | lineage2.1 | vn | ERR6866426 | Sensitive | lineage4.8 | None | SRR14802277 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423584 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SAMN02419611 | Pre-XDR-TB | lineage2.2.1 | by | SRR1172071 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516433 | Sensitive | lineage4.1.2.1 | pe | ERR5865169 | MDR-TB | lineage4.2.1 | None | ERR6866445 | Sensitive | lineage4.1.2.1 | None | SRR5709826 | Pre-XDR-TB | lineage2.2.1 | th | SRR1140936 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR6358848 | MDR-TB | lineage4.6.1.1 | None | ERR2516430 | Pre-XDR-TB | lineage4 | pe | SAMN02419634 | Pre-XDR-TB | lineage2.2.1 | by | ERR3639775 | MDR-TB | lineage2.2.2 | None | ERR867532 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808504 | Sensitive | lineage4.1.2.1 | None | ERR2516534 | Pre-XDR-TB | lineage4 | pe | ERR5865168 | MDR-TB | lineage4.2.1 | None | ERR2184503 | Sensitive | lineage4.1.2.1 | pe | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174282 | MDR-TB | lineage3 | None | SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th | SRR11972445 | MDR-TB | lineage4.1.1.1 | None | ERR3287517 | MDR-TB | lineage4 | None | SRR5709884 | Pre-XDR-TB | lineage2.2.1 | th | ERR2516645 | Pre-XDR-TB | lineage4 | pe | ERR10680207 | MDR-TB | lineage4.1.2.1 | None | SRR1163392 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR25827478 | MDR-TB | lineage4.8 | None | ERR11081043 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1163332 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680000 | MDR-TB | lineage4.1.3 | None | SRR28434983 | MDR-TB | lineage2.2.1 | None | SRR28046333 | MDR-TB | lineage3 | None | SRR28393557 | Sensitive | lineage4.1.2.1 | None | SRR28393546 | MDR-TB | lineage4.1.2.1 | None | ERR3014580 | MDR-TB | lineage4.8 | tn | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR10680210 | RR-TB | lineage4.1.2.1 | None | SRR1169033 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379971 | MDR-TB | lineage4.2.1 | None | SRR1166253 | MDR-TB | lineage4.4.1.1 | ro | SRR6458413 | Pre-XDR-TB | lineage2.2.1 | None | ERR040140 | Pre-XDR-TB | lineage3 | ug | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR21887695 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR023452 | RR-TB | lineage4.1.2.1 | None | SRR6964636 | MDR-TB | lineage3 | None | SRR1169119 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707073 | RR-TB | lineage4.8 | cd | SRR023453 | Sensitive | lineage4.1.2.1 | None | ERR1679656 | MDR-TB | lineage4.6.2.2 | ng | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR671724 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671844 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5865765 | MDR-TB | lineage2.2.1 | None |
|---|
