Rv3854c - c.-7T>C


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
0 Sensitive 1 RR-TB 5 HR-TB 532 MDR-TB 177 Pre-XDR-TB 9 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 672
lineage3 1
lineage2.2.1;lineage4 9
lineage4.8 2
lineage2.2.2 1
lineage2.2.1;lineage4.2.1 3
lineage2.2.1;lineage4.3.3 5
lineage4.1.1.1 19
lineage2.2.1;lineage4.2.1.1 1
lineage2.2.1;lineage4.1.2.1 2
lineage4.1.2.1 1
lineage2.2.1;lineage4.2.1;lineage4.3.3 1
lineage2.2.1;lineage5 1
lineage4.2.2.2 1
lineage2.2.1;lineage4.8 3
lineage2.2.1;lineage3 2
lineage4.3.3 1
lineage2.2.1;lineage4.2.1.1;lineage4.8 1
spoligotype Counts
spoligotype Count
None 726
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11043640 MDR-TB lineage2.2.1 None
ERR5865139 MDR-TB lineage2.2.1 None
ERR5865138 MDR-TB lineage2.2.1 None
ERR11082705 MDR-TB lineage2.2.1 None
SRR28888080 XDR-TB lineage2.2.1 None
SRR7653024 Pre-XDR-TB lineage2.2.1 None
SRR23310936 Pre-XDR-TB lineage2.2.1 None
ERR4800148 HR-TB lineage3 None
ERR11068995 MDR-TB lineage2.2.1 None
SRR24709984 XDR-TB lineage2.2.1 None
ERR5865992 MDR-TB lineage2.2.1 None
ERR067587 MDR-TB lineage2.2.1 ru
ERR067654 MDR-TB lineage2.2.1 ru
ERR067663 MDR-TB lineage2.2.1 ru
ERR229947 Pre-XDR-TB lineage2.2.1 ru
ERR228043 MDR-TB lineage2.2.1 ru
ERR144620 MDR-TB lineage2.2.1;lineage4 ru
ERR5864688 MDR-TB lineage2.2.1 None
ERR2510881 MDR-TB lineage2.2.1 it
ERR5865826 MDR-TB lineage2.2.1 None
SRR6484925 MDR-TB lineage2.2.1 None
ERR11080965 MDR-TB lineage4.8 None
ERR5865403 MDR-TB lineage2.2.1 None
SRR6257104 MDR-TB lineage2.2.1 None
SRR16115884 MDR-TB lineage2.2.1 None
ERR5865402 MDR-TB lineage2.2.1 None
ERR5866209 MDR-TB lineage2.2.1 None
ERR4829378 Pre-XDR-TB lineage2.2.1 it
ERR5865204 MDR-TB lineage2.2.1 None
ERR5866448 MDR-TB lineage2.2.1 None
SRR5153086 Pre-XDR-TB lineage2.2.1 None
SRR24256281 MDR-TB lineage2.2.1 None
ERR7910955 MDR-TB lineage2.2.1 None
SRR7654035 MDR-TB lineage2.2.1 None
SRR6785156 MDR-TB lineage2.2.1 None
SRR6785192 MDR-TB lineage2.2.1 None
ERR3132172 MDR-TB lineage2.2.1;lineage4 None
SRR14801647 Pre-XDR-TB lineage2.2.1 None
SRR6930890 Pre-XDR-TB lineage2.2.2 None
SRR6485078 RR-TB lineage2.2.1 None
SRR28240155 MDR-TB lineage2.2.1 None
ERR11043418 MDR-TB lineage2.2.1 None
ERR11050157 MDR-TB lineage2.2.1 None
ERR11081254 MDR-TB lineage2.2.1 None
ERR403250 MDR-TB lineage2.2.1 None
ERR5865639 MDR-TB lineage2.2.1 None
SRR23310854 MDR-TB lineage2.2.1 None
SRR5153829 MDR-TB lineage2.2.1 None
ERR9286038 Pre-XDR-TB lineage2.2.1 None
ERR229966 MDR-TB lineage2.2.1 ru
SRR10397190 MDR-TB lineage2.2.1 None
SRR1173347 Pre-XDR-TB lineage2.2.1 None
ERR11082657 MDR-TB lineage2.2.1 None
SRR21690725 MDR-TB lineage2.2.1 None
SRR1162881 MDR-TB lineage2.2.1 None
ERR027463 Pre-XDR-TB lineage2.2.1 None
ERR5865203 MDR-TB lineage2.2.1 None
ERR13284477 MDR-TB lineage2.2.1 None
SRR10380063 Pre-XDR-TB lineage2.2.1 None
SRR29341517 MDR-TB lineage2.2.1 None
SRR6832621 Pre-XDR-TB lineage2.2.1 None
ERR13284234 MDR-TB lineage2.2.1 None
ERR13273365 MDR-TB lineage2.2.1 None
SRR10397198 MDR-TB lineage2.2.1 None
ERR11243579 MDR-TB lineage2.2.1 None
SRR1173868 Pre-XDR-TB lineage2.2.1 None
SRR6807762 MDR-TB lineage2.2.1 None
ERR13276045 MDR-TB lineage2.2.1 None
SRR14807527 MDR-TB lineage2.2.1;lineage4.2.1 None
ERR13290439 MDR-TB lineage2.2.1 None
ERR13284220 MDR-TB lineage2.2.1 None
ERR403242 MDR-TB lineage2.2.1 None
SRR7653080 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR117461 MDR-TB lineage2.2.1 None
SRR13232760 MDR-TB lineage2.2.1 None
ERR13290523 MDR-TB lineage4.1.1.1 None
SRR10397213 MDR-TB lineage2.2.1 None
SRR24828598 Pre-XDR-TB lineage2.2.1 None
SRR1165557 MDR-TB lineage4.1.1.1 None
ERR234613 MDR-TB lineage2.2.1;lineage4.3.3 None
ERR234626 MDR-TB lineage2.2.1;lineage4.2.1.1 None
ERR5865775 MDR-TB lineage2.2.1 None
SRR6356999 MDR-TB lineage2.2.1 None
SRR6832512 MDR-TB lineage2.2.1 None
ERR13284291 MDR-TB lineage2.2.1 None
ERR13284293 MDR-TB lineage2.2.1 None
ERR229930 MDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR23861879 Pre-XDR-TB lineage2.2.1 None
ERR13284694 MDR-TB lineage2.2.1 None
ERR13290438 MDR-TB lineage2.2.1 None
ERR13273384 MDR-TB lineage2.2.1 None
ERR403228 MDR-TB lineage2.2.1 None
SRR29538982 MDR-TB lineage2.2.1 None
SRR6353887 Pre-XDR-TB lineage2.2.1 None
SRR7655785 Pre-XDR-TB lineage2.2.1 None
ERR5865205 MDR-TB lineage2.2.1 None
ERR5865404 MDR-TB lineage2.2.1 None
ERR5865788 MDR-TB lineage2.2.1 None
ERR5866207 MDR-TB lineage2.2.1 None
ERR017795 Pre-XDR-TB lineage2.2.1 None
ERR13431991 Pre-XDR-TB lineage2.2.1 None
ERR5866197 MDR-TB lineage2.2.1 None
ERR13276051 MDR-TB lineage2.2.1 None
ERR13290441 MDR-TB lineage2.2.1 None
ERR5864818 MDR-TB lineage2.2.1 None
SRR7652978 Pre-XDR-TB lineage2.2.1 None
ERR13192114 MDR-TB lineage2.2.1 None
SRR7653001 MDR-TB lineage2.2.1 None
SRR6485010 MDR-TB lineage2.2.1 None
SRR14801870 Pre-XDR-TB lineage2.2.1 None
SRR6257022 Pre-XDR-TB lineage2.2.1 None
SRR6785362 MDR-TB lineage2.2.1 None
ERR144617 MDR-TB lineage2.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR11243545 MDR-TB lineage2.2.1 None
SRR28393755 MDR-TB lineage4.1.2.1 None
SRR1172091 Pre-XDR-TB lineage2.2.1 None
ERR13284019 MDR-TB lineage4.1.1.1 None
ERR5864650 MDR-TB lineage2.2.1 None
SRR28888050 XDR-TB lineage2.2.1 None
ERR11043896 MDR-TB lineage2.2.1 None
ERR13290525 MDR-TB lineage4.1.1.1 None
ERR9119681 Pre-XDR-TB lineage2.2.1 None
ERR10762263 MDR-TB lineage2.2.1 None
ERR019564 MDR-TB lineage2.2.1 ru
ERR13284249 MDR-TB lineage2.2.1 None
SRR6785451 MDR-TB lineage2.2.1 None
SRR6807673 MDR-TB lineage2.2.1 None
SRR6831810 Pre-XDR-TB lineage2.2.1 None
ERR550837 MDR-TB lineage2.2.1 None
ERR5865365 MDR-TB lineage2.2.1 None
ERR5865753 MDR-TB lineage2.2.1 None
ERR403273 MDR-TB lineage2.2.1 None
ERR13284745 MDR-TB lineage2.2.1 None
ERR4276904 MDR-TB lineage4.1.1.1 None
ERR13284459 MDR-TB lineage2.2.1 None
SRR7654040 HR-TB lineage2.2.1 None
ERR13284457 MDR-TB lineage2.2.1 None
ERR13284314 MDR-TB lineage2.2.1 None
ERR7910936 MDR-TB lineage2.2.1 None
ERR13262236 Pre-XDR-TB lineage2.2.1 None
ERR11069099 MDR-TB lineage2.2.1 None
ERR4827649 MDR-TB lineage2.2.1 None
ERR403240 MDR-TB lineage2.2.1 None
ERR5865437 MDR-TB lineage2.2.1 None
ERR5865235 Other lineage2.2.1 None
ERR017799 Pre-XDR-TB lineage2.2.1 None
ERR4827601 Pre-XDR-TB lineage2.2.1 None
ERR11043637 MDR-TB lineage2.2.1 None
SRR998861 MDR-TB lineage2.2.1 None
ERR4828054 MDR-TB lineage2.2.1 None
SRR16115021 MDR-TB lineage2.2.1 None
ERR8774359 MDR-TB lineage2.2.1 None
ERR4827803 MDR-TB lineage2.2.1 None
SRR6785416 HR-TB lineage2.2.1 None
ERR13275987 MDR-TB lineage2.2.1 None
ERR2307435 MDR-TB lineage2.2.1 None
ERR13284245 MDR-TB lineage2.2.1 None
SRR1162886 MDR-TB lineage4.1.1.1 None
ERR5865751 MDR-TB lineage2.2.1 None
ERR9286037 Pre-XDR-TB lineage2.2.1 None
ERR5866158 MDR-TB lineage2.2.1 None
ERR5865996 MDR-TB lineage2.2.1 None
SRR13232735 MDR-TB lineage2.2.1 None
SRR7653017 Pre-XDR-TB lineage2.2.1 None
ERR11081734 MDR-TB lineage2.2.1 None
SRR5153617 Pre-XDR-TB lineage2.2.1 None
SRR7655612 MDR-TB lineage2.2.1 None
ERR13106401 MDR-TB lineage2.2.1 None
ERR13292280 MDR-TB lineage2.2.1 None
ERR11043123 MDR-TB lineage2.2.1 None
SRR6484984 Pre-XDR-TB lineage2.2.1 None
SRR23861775 MDR-TB lineage2.2.1 None
ERR13284782 MDR-TB lineage4.8 None
ERR11081278 MDR-TB lineage2.2.1 None
ERR13273323 MDR-TB lineage2.2.1 None
SRR29539591 MDR-TB lineage2.2.1 None
ERR11081365 MDR-TB lineage2.2.1 None
ERR7362042 MDR-TB lineage2.2.1;lineage4 None
ERR13284272 MDR-TB lineage2.2.1 None
ERR5865752 MDR-TB lineage2.2.1 None
ERR13275979 MDR-TB lineage2.2.1 None
ERR5865787 MDR-TB lineage2.2.1 None
ERR13281475 Pre-XDR-TB lineage2.2.1 None
ERR13284708 MDR-TB lineage2.2.1 None
ERR11773823 Pre-XDR-TB lineage2.2.1 None
ERR13284055 MDR-TB lineage2.2.1 None
ERR144591 Pre-XDR-TB lineage2.2.1 ru
SRR7653015 Pre-XDR-TB lineage2.2.1 None
ERR234621 MDR-TB lineage2.2.1 ru
SRR29539642 Pre-XDR-TB lineage2.2.1 None
ERR3639769 MDR-TB lineage2.2.1 None
ERR13273204 MDR-TB lineage2.2.1 None
SRR17658014 MDR-TB lineage2.2.1 None
SRR5761430 MDR-TB lineage2.2.1 None
SRR14801543 MDR-TB lineage2.2.1 None
SRR14802147 MDR-TB lineage2.2.1 None
ERR108438 MDR-TB lineage2.2.1;lineage4.2.1;lineage4.3.3 None
ERR13284453 MDR-TB lineage2.2.1 None
ERR4827935 MDR-TB lineage2.2.1;lineage5 None
ERR4797580 Pre-XDR-TB lineage2.2.1 in
ERR5866475 MDR-TB lineage2.2.1 None
ERR4828041 MDR-TB lineage2.2.1 None
ERR13276074 MDR-TB lineage2.2.1 None
ERR5864816 Pre-XDR-TB lineage2.2.1 None
ERR027455 MDR-TB lineage2.2.1 ru
SRR6484899 Other lineage2.2.1 None
SRR28240211 MDR-TB lineage2.2.1 None
SRR7653027 Pre-XDR-TB lineage2.2.1 None
ERR4822407 MDR-TB lineage2.2.1 ua
ERR4830081 Pre-XDR-TB lineage2.2.1 None
ERR11043378 MDR-TB lineage2.2.1 None
ERR11067853 MDR-TB lineage2.2.1 None
SRR6785549 MDR-TB lineage2.2.1 None
SRR6832241 Pre-XDR-TB lineage2.2.1 None
ERR11082651 MDR-TB lineage2.2.1 None
ERR11081600 MDR-TB lineage2.2.1 None
ERR4799716 Pre-XDR-TB lineage4.2.2.2 in
ERR13284475 MDR-TB lineage2.2.1 None
ERR5866447 MDR-TB lineage2.2.1 None
ERR11082697 MDR-TB lineage2.2.1 None
ERR484733 MDR-TB lineage2.2.1;lineage4.8 None
SRR6257082 MDR-TB lineage2.2.1 ru
SRR5153228 MDR-TB lineage2.2.1 None
ERR5864685 MDR-TB lineage2.2.1 None
ERR11243546 MDR-TB lineage2.2.1 None
SAMN02414939 MDR-TB lineage4.1.1.1 se
ERR5865406 MDR-TB lineage2.2.1 None
ERR13284429 MDR-TB lineage2.2.1 None
ERR5866159 MDR-TB lineage2.2.1 None
SAMN02628485 Pre-XDR-TB lineage2.2.1 ir
SAMN02628483 Pre-XDR-TB lineage2.2.1 ir
SAMN02628508 Pre-XDR-TB lineage2.2.1 ir
SAMN02628484 Pre-XDR-TB lineage2.2.1 ir
ERR4827732 MDR-TB lineage2.2.1 None
ERR5864684 MDR-TB lineage2.2.1 None
ERR5865970 Pre-XDR-TB lineage2.2.1 None
ERR5866476 MDR-TB lineage2.2.1 None
ERR11069034 MDR-TB lineage2.2.1 None
ERR2864286 MDR-TB lineage2.2.1 pt
ERR5864655 MDR-TB lineage2.2.1 None
ERR8774358 MDR-TB lineage2.2.1 None
SRR18911238 MDR-TB lineage2.2.1 None
SRR28498565 Pre-XDR-TB lineage2.2.1 None
SRR28714181 XDR-TB lineage2.2.1 None
ERR11773832 MDR-TB lineage2.2.1 None
SRR28351408 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR28888052 XDR-TB lineage2.2.1 None
SRR23310860 Pre-XDR-TB lineage2.2.1 None
SRR6785293 MDR-TB lineage2.2.1 None
ERR5865724 MDR-TB lineage2.2.1 None
ERR5866499 MDR-TB lineage2.2.1 None
ERR4822308 MDR-TB lineage4.1.1.1 de
ERR7911377 MDR-TB lineage2.2.1 us
ERR4830593 MDR-TB lineage2.2.1 tm
ERR1023400 MDR-TB lineage2.2.1 None
ERR11773793 Pre-XDR-TB lineage2.2.1 None
ERR11773836 MDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4827933 Pre-XDR-TB lineage2.2.1 None
ERR403313 MDR-TB lineage2.2.1 None
ERR4827570 Pre-XDR-TB lineage2.2.1 None
ERR5866540 MDR-TB lineage2.2.1 None
SRR6485126 MDR-TB lineage2.2.1 None
SRR10397138 MDR-TB lineage2.2.1 None
SRR11033719 MDR-TB lineage2.2.1 None
SRR5153815 Pre-XDR-TB lineage2.2.1 None
ERR11773807 Pre-XDR-TB lineage2.2.1 None
ERR227986 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
ERR403301 Pre-XDR-TB lineage2.2.1 None
ERR5864686 MDR-TB lineage2.2.1 None
SAMEA2533511 MDR-TB lineage2.2.1 uz
SRR6832573 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR23339949 MDR-TB lineage2.2.1 None
ERR5866392 Pre-XDR-TB lineage2.2.1 None
ERR403221 MDR-TB lineage2.2.1 None
SRR24256211 MDR-TB lineage2.2.1 None
ERR11081599 MDR-TB lineage2.2.1 None
SRR1163087 MDR-TB lineage2.2.1 None
SRR1165525 MDR-TB lineage4.1.1.1 None
ERR11050145 MDR-TB lineage2.2.1 None
SRR28888081 XDR-TB lineage2.2.1 None
ERR5865875 Pre-XDR-TB lineage2.2.1 None
SRR6785274 Pre-XDR-TB lineage2.2.1 None
ERR13264934 MDR-TB lineage2.2.1 None
ERR2199853 MDR-TB lineage2.2.1 None
SRR1183088 Pre-XDR-TB lineage2.2.1 None
ERR403218 MDR-TB lineage2.2.1 None
ERR11043482 Pre-XDR-TB lineage2.2.1 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR11044017 MDR-TB lineage4.1.1.1 None
ERR5865364 MDR-TB lineage2.2.1 None
ERR11081378 MDR-TB lineage2.2.1 None
ERR8774581 Pre-XDR-TB lineage2.2.1 None
ERR5865436 MDR-TB lineage2.2.1 None
ERR403284 Pre-XDR-TB lineage2.2.1 None
SRR6785185 Pre-XDR-TB lineage2.2.1 None
SRR24255937 MDR-TB lineage2.2.1 None
SRR28888083 XDR-TB lineage2.2.1 None
SRR28351658 Pre-XDR-TB lineage2.2.1 None
SRR6256992 Pre-XDR-TB lineage2.2.1 None
SRR6785498 MDR-TB lineage2.2.1 None
ERR13284043 MDR-TB lineage2.2.1 None
ERR5865777 MDR-TB lineage2.2.1 None
SRR6832254 MDR-TB lineage2.2.1 None
ERR3275831 MDR-TB lineage2.2.1 nl
ERR13276184 MDR-TB lineage4.1.1.1 None
SRR5153272 Pre-XDR-TB lineage2.2.1 None
ERR5864815 Pre-XDR-TB lineage2.2.1 None
ERR13284743 MDR-TB lineage2.2.1 None
ERR5864654 MDR-TB lineage2.2.1 None
SRR6916544 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR1173684 Pre-XDR-TB lineage2.2.1 None
SRR6485106 MDR-TB lineage2.2.1 None
ERR13292549 MDR-TB lineage2.2.1 None
SRR1180166 Pre-XDR-TB lineage2.2.1 None
ERR13273338 MDR-TB lineage2.2.1 None
ERR13276047 MDR-TB lineage2.2.1 None
SRR7652970 Pre-XDR-TB lineage2.2.1 None
ERR5866463 MDR-TB lineage2.2.1 None
ERR403282 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR13273367 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR5865959 MDR-TB lineage2.2.1 None
SRR5153222 Pre-XDR-TB lineage2.2.1 None
SRR6485145 MDR-TB lineage2.2.1 None
SRR28239932 MDR-TB lineage2.2.1 None
ERR13284436 MDR-TB lineage2.2.1 None
SRR6485074 MDR-TB lineage2.2.1 None
ERR11243544 MDR-TB lineage2.2.1 None
ERR5866195 MDR-TB lineage2.2.1 None
ERR5866393 Pre-XDR-TB lineage2.2.1 None
ERR13273201 MDR-TB lineage2.2.1 None
ERR5866519 MDR-TB lineage2.2.1 None
ERR13275955 MDR-TB lineage2.2.1 None
ERR133972 MDR-TB lineage2.2.1;lineage4.8 None
ERR13273314 MDR-TB lineage2.2.1 None
ERR13275918 MDR-TB lineage2.2.1 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR5864651 MDR-TB lineage2.2.1 None
ERR5864682 MDR-TB lineage2.2.1 None
ERR5865838 Pre-XDR-TB lineage2.2.1 None
ERR13284425 MDR-TB lineage2.2.1 None
ERR13276009 MDR-TB lineage2.2.1 None
ERR13290440 MDR-TB lineage2.2.1 None
ERR5866157 MDR-TB lineage2.2.1 None
SRR6484937 Pre-XDR-TB lineage2.2.1 None
ERR13292390 MDR-TB lineage2.2.1 None
SRR14801645 MDR-TB lineage2.2.1 None
ERR403267 MDR-TB lineage2.2.1;lineage4.8 None
ERR13284931 MDR-TB lineage2.2.1 None
ERR403271 MDR-TB lineage2.2.1 None
ERR403290 MDR-TB lineage2.2.1 None
SRR14781907 Pre-XDR-TB lineage2.2.1 None
SRR18911993 MDR-TB lineage2.2.1 None
ERR2307540 MDR-TB lineage2.2.1 None
SRR13232702 MDR-TB lineage2.2.1 None
ERR229922 MDR-TB lineage2.2.1 ru
ERR11083017 MDR-TB lineage2.2.1 None
ERR13276064 MDR-TB lineage2.2.1 None
ERR5865825 MDR-TB lineage2.2.1 None
ERR11043414 MDR-TB lineage2.2.1 None
ERR403268 MDR-TB lineage2.2.1 None
ERR13273359 MDR-TB lineage2.2.1 None
ERR13290522 MDR-TB lineage4.1.1.1 None
SRR6785170 MDR-TB lineage2.2.1 None
SRR1174308 Pre-XDR-TB lineage2.2.1 None
SRR5153078 Pre-XDR-TB lineage2.2.1 None
ERR227993 MDR-TB lineage2.2.1;lineage4.2.1 None
SRR24673553 MDR-TB lineage2.2.1 None
ERR13284605 MDR-TB lineage2.2.1 None
SRR24256109 MDR-TB lineage2.2.1 None
ERR13281464 Pre-XDR-TB lineage2.2.1 None
SRR28351390 Pre-XDR-TB lineage2.2.1 None
ERR13284137 MDR-TB lineage2.2.1 None
ERR403303 MDR-TB lineage2.2.1 None
SRR6485099 Pre-XDR-TB lineage2.2.1 None
ERR403266 MDR-TB lineage2.2.1 None
ERR5866196 MDR-TB lineage2.2.1 None
ERR5865638 MDR-TB lineage2.2.1 None
ERR13290524 MDR-TB lineage4.1.1.1 None
ERR5865776 MDR-TB lineage2.2.1 None
SRR6356954 Pre-XDR-TB lineage2.2.1 None
ERR137226 MDR-TB lineage2.2.1 None
SRR29539224 Pre-XDR-TB lineage2.2.1 None
ERR5865750 MDR-TB lineage2.2.1 None
SRR29539209 Pre-XDR-TB lineage2.2.1 None
ERR5864687 MDR-TB lineage2.2.1 None
ERR3335785 Pre-XDR-TB lineage2.2.1 pk
SRR5153712 Pre-XDR-TB lineage2.2.1 None
ERR108454 MDR-TB lineage2.2.1 ru
ERR133843 Pre-XDR-TB lineage2.2.1 ru
ERR550838_ERR550837 MDR-TB lineage2.2.1 None
ERR067628 MDR-TB lineage2.2.1 ru
ERR230009 MDR-TB lineage2.2.1 ru
ERR403316 MDR-TB lineage2.2.1 None
SRR6256984 MDR-TB lineage2.2.1 ru
ERR13273369 MDR-TB lineage2.2.1 None
ERR5865405 MDR-TB lineage2.2.1 None
SRR6484847 MDR-TB lineage2.2.1 None
ERR5866391 Pre-XDR-TB lineage2.2.1 None
SRR7657753 MDR-TB lineage2.2.1 None
SRR29126263 MDR-TB lineage2.2.1 None
SRR6356946 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR1144810 MDR-TB lineage2.2.1 None
ERR1034673 MDR-TB lineage4.3.3 co
SRR5153600 Pre-XDR-TB lineage2.2.1 None
ERR11043274 MDR-TB lineage2.2.1 None
ERR11082374 MDR-TB lineage2.2.1 None
ERR228020 MDR-TB lineage2.2.1 ru
SAMN02414916 MDR-TB lineage2.2.1 se
ERR5866462 MDR-TB lineage2.2.1 None
ERR403305 MDR-TB lineage2.2.1 None
SRR6256985 Pre-XDR-TB lineage2.2.1 ru
SRR28888082 XDR-TB lineage2.2.1 None
ERR4822315 MDR-TB lineage4.1.1.1 de
ERR11773758 Pre-XDR-TB lineage2.2.1 None
SRR24255905 Pre-XDR-TB lineage2.2.1 None
ERR8665864 Pre-XDR-TB lineage2.2.1 None
ERR7911024 MDR-TB lineage2.2.1 md
ERR5865836 MDR-TB lineage2.2.1 None
ERR5866208 MDR-TB lineage2.2.1 None
SRR1146417 MDR-TB lineage2.2.1 None
SRR1173552 Pre-XDR-TB lineage2.2.1 None
SRR7655782 MDR-TB lineage2.2.1 None
ERR5865362 MDR-TB lineage2.2.1 None
ERR5865997 MDR-TB lineage2.2.1 None
SRR1174328 Pre-XDR-TB lineage2.2.1 None
SRR28498720 MDR-TB lineage2.2.1 None
ERR5866541 MDR-TB lineage2.2.1 None
SRR1166926 MDR-TB lineage4.1.1.1 None
ERR553238 MDR-TB lineage2.2.1 de
SRR5266553 MDR-TB lineage2.2.1 ru
ERR133868 MDR-TB lineage2.2.1 ru
ERR234590 Pre-XDR-TB lineage2.2.1 ru
ERR133902 MDR-TB lineage2.2.1 ru
ERR137204 Pre-XDR-TB lineage2.2.1 ru
ERR234574 MDR-TB lineage2.2.1 ru
ERR144575 MDR-TB lineage2.2.1 ru
ERR108473 MDR-TB lineage2.2.1 ru
ERR144633 MDR-TB lineage2.2.1 ru
ERR158613 MDR-TB lineage2.2.1 ru
ERR144632 MDR-TB lineage2.2.1 ru
ERR144611 Pre-XDR-TB lineage2.2.1 ru
ERR229921 MDR-TB lineage2.2.1 ru
ERR137262 MDR-TB lineage2.2.1 ru
ERR133889 MDR-TB lineage2.2.1 ru
ERR067742 MDR-TB lineage2.2.1 ru
ERR067762 MDR-TB lineage2.2.1 ru
ERR158586 MDR-TB lineage2.2.1 ru
ERR234570 MDR-TB lineage2.2.1;lineage4 ru
ERR133895 MDR-TB lineage2.2.1 ru
ERR234565 MDR-TB lineage2.2.1 ru
ERR137269 MDR-TB lineage2.2.1 ru
ERR234576 Pre-XDR-TB lineage2.2.1 ru
ERR108436 MDR-TB lineage2.2.1 ru
ERR234622 MDR-TB lineage2.2.1 ru
ERR158611 MDR-TB lineage2.2.1 ru
ERR229946 MDR-TB lineage2.2.1 ru
ERR133806 MDR-TB lineage2.2.1 ru
ERR144597 MDR-TB lineage2.2.1 ru
ERR117470 MDR-TB lineage2.2.1 ru
ERR144593 Pre-XDR-TB lineage2.2.1 ru
ERR133886 MDR-TB lineage2.2.1 ru
ERR067765 MDR-TB lineage2.2.1 ru
ERR067754 MDR-TB lineage2.2.1 ru
ERR234609 MDR-TB lineage2.2.1 ru
ERR108458 MDR-TB lineage2.2.1 ru
ERR234666 MDR-TB lineage2.2.1;lineage4 ru
ERR228061 MDR-TB lineage2.2.1 ru
ERR234698 MDR-TB lineage2.2.1 ru
ERR229924 MDR-TB lineage2.2.1 ru
ERR158585 Pre-XDR-TB lineage2.2.1 ru
ERR108489 MDR-TB lineage2.2.1 ru
ERR158576 MDR-TB lineage2.2.1 ru
ERR228064 MDR-TB lineage2.2.1 ru
ERR234641 Pre-XDR-TB lineage2.2.1 ru
ERR133953 MDR-TB lineage2.2.1 ru
ERR133906 MDR-TB lineage2.2.1 ru
ERR234633 Pre-XDR-TB lineage2.2.1 ru
ERR133826 MDR-TB lineage2.2.1 ru
ERR067758 MDR-TB lineage2.2.1 ru
ERR229918 MDR-TB lineage2.2.1 ru
ERR137281 MDR-TB lineage2.2.1 ru
ERR133854 Pre-XDR-TB lineage2.2.1 ru
ERR228046 MDR-TB lineage2.2.1 ru
ERR144551 Pre-XDR-TB lineage2.2.1 ru
ERR133860 MDR-TB lineage2.2.1 ru
ERR133827 MDR-TB lineage2.2.1 ru
ERR133944 MDR-TB lineage2.2.1 ru
ERR158592 MDR-TB lineage2.2.1 ru
ERR137210 MDR-TB lineage2.2.1 ru
ERR067651 MDR-TB lineage2.2.1 ru
ERR117468 MDR-TB lineage2.2.1 ru
ERR133866 MDR-TB lineage2.2.1 ru
ERR137220 MDR-TB lineage2.2.1 ru
ERR229923 MDR-TB lineage2.2.1 ru
ERR144556 MDR-TB lineage2.2.1;lineage4 ru
ERR144561 MDR-TB lineage2.2.1 ru
ERR144628 MDR-TB lineage2.2.1 ru
ERR228019 MDR-TB lineage2.2.1 ru
ERR144590 MDR-TB lineage2.2.1 ru
ERR133915 MDR-TB lineage2.2.1 ru
ERR144562 MDR-TB lineage2.2.1 ru
ERR144548 MDR-TB lineage2.2.1 ru
ERR108502 MDR-TB lineage2.2.1 ru
ERR067711 MDR-TB lineage2.2.1 ru
ERR234598 Pre-XDR-TB lineage2.2.1 ru
ERR229960 Pre-XDR-TB lineage2.2.1 ru
ERR117460 MDR-TB lineage2.2.1 ru
ERR108475 MDR-TB lineage2.2.1 ru
ERR229994 MDR-TB lineage2.2.1 ru
ERR067656 MDR-TB lineage2.2.1 ru
ERR234618 MDR-TB lineage2.2.1 ru
ERR228013 MDR-TB lineage2.2.1 ru
ERR144549 MDR-TB lineage2.2.1 ru
ERR133959 MDR-TB lineage2.2.1 ru
ERR133831 MDR-TB lineage2.2.1 ru
ERR137283 MDR-TB lineage2.2.1 ru
ERR067721 MDR-TB lineage2.2.1 ru
ERR067620 MDR-TB lineage2.2.1 ru
ERR067673 MDR-TB lineage2.2.1 ru
ERR067578 MDR-TB lineage2.2.1 ru
ERR067650 MDR-TB lineage2.2.1 ru
ERR108493 MDR-TB lineage2.2.1 ru
ERR067649 MDR-TB lineage2.2.1 ru
ERR137222 MDR-TB lineage2.2.1 ru
ERR067583 MDR-TB lineage2.2.1 ru
ERR067576 MDR-TB lineage2.2.1 ru
ERR234623 MDR-TB lineage2.2.1 ru
ERR228029 MDR-TB lineage2.2.1 ru
ERR133930 MDR-TB lineage2.2.1 ru
ERR067695 MDR-TB lineage2.2.1 ru
ERR228017 MDR-TB lineage2.2.1 ru
ERR133839 MDR-TB lineage2.2.1 ru
ERR234596 Pre-XDR-TB lineage2.2.1 ru
ERR067613 MDR-TB lineage2.2.1 ru
ERR227996 Pre-XDR-TB lineage2.2.1 ru
ERR234560 Pre-XDR-TB lineage2.2.1 ru
ERR229962 Pre-XDR-TB lineage2.2.1 ru
ERR234660 MDR-TB lineage2.2.1 ru
ERR067635 Pre-XDR-TB lineage2.2.1 ru
ERR234593 MDR-TB lineage2.2.1 ru
ERR144600 Pre-XDR-TB lineage2.2.1 ru
ERR067592 Pre-XDR-TB lineage2.2.1 ru
ERR067718 Pre-XDR-TB lineage2.2.1 ru
ERR067704 Pre-XDR-TB lineage2.2.1 ru
ERR234653 Pre-XDR-TB lineage2.2.1 ru
ERR067619 Pre-XDR-TB lineage2.2.1 ru
ERR137230 MDR-TB lineage2.2.1 ru
ERR234573 MDR-TB lineage2.2.1 ru
ERR234608 MDR-TB lineage2.2.1 ru
ERR144543 Pre-XDR-TB lineage2.2.1 ru
ERR137277 MDR-TB lineage2.2.1 ru
ERR137260 MDR-TB lineage2.2.1 ru
ERR067687 MDR-TB lineage2.2.1 ru
ERR108462 MDR-TB lineage2.2.1 ru
ERR228003 MDR-TB lineage2.2.1 ru
ERR137246 MDR-TB lineage2.2.1 ru
ERR108503 MDR-TB lineage2.2.1 ru
ERR230008 MDR-TB lineage2.2.1 ru
ERR133908 Pre-XDR-TB lineage2.2.1 ru
ERR067709 MDR-TB lineage2.2.1 ru
ERR067622 MDR-TB lineage2.2.1 ru
ERR067750 Pre-XDR-TB lineage2.2.1 ru
ERR133919 MDR-TB lineage2.2.1 ru
ERR067653 Pre-XDR-TB lineage2.2.1 ru
ERR144574 Pre-XDR-TB lineage2.2.1 ru
ERR234563 MDR-TB lineage2.2.1 ru
ERR229998 MDR-TB lineage2.2.1 ru
ERR067660 MDR-TB lineage2.2.1 ru
ERR144636 Pre-XDR-TB lineage2.2.1 ru
ERR137275 Pre-XDR-TB lineage2.2.1 ru
ERR067618 Pre-XDR-TB lineage2.2.1 ru
ERR067643 MDR-TB lineage2.2.1 ru
ERR144619 MDR-TB lineage2.2.1 ru
ERR067761 Pre-XDR-TB lineage2.2.1 ru
ERR229984 Pre-XDR-TB lineage2.2.1 ru
ERR229931 MDR-TB lineage2.2.1 ru
ERR234637 MDR-TB lineage2.2.1 ru
ERR067717 Pre-XDR-TB lineage2.2.1 ru
ERR228042 MDR-TB lineage2.2.1;lineage4 ru
ERR108507 Pre-XDR-TB lineage2.2.1 ru
ERR228050 MDR-TB lineage2.2.1 ru
ERR137223 Pre-XDR-TB lineage2.2.1 ru
ERR228012 MDR-TB lineage2.2.1 ru
ERR227987 MDR-TB lineage2.2.1 ru
ERR117453 Pre-XDR-TB lineage2.2.1 ru
ERR067581 MDR-TB lineage2.2.1 ru
ERR067627 MDR-TB lineage2.2.1 ru
ERR133805 MDR-TB lineage2.2.1 ru
ERR229997 MDR-TB lineage2.2.1 ru
ERR137248 Pre-XDR-TB lineage2.2.1 ru
ERR133935 MDR-TB lineage2.2.1 ru
ERR117462 Pre-XDR-TB lineage2.2.1 ru
ERR158590 MDR-TB lineage2.2.1 ru
ERR2677407 MDR-TB lineage2.2.1 de
ERR2516949 MDR-TB lineage2.2.1 gb
ERR2516953 MDR-TB lineage2.2.1 gb
ERR2516866 MDR-TB lineage2.2.1 gb
ERR2516826 MDR-TB lineage2.2.1 gb
ERR2516759 MDR-TB lineage2.2.1 gb
ERR2516973 MDR-TB lineage2.2.1 gb
ERR2516584 MDR-TB lineage2.2.1 nl
ERR2516474 MDR-TB lineage2.2.1 nl
ERR552194 MDR-TB lineage2.2.1 az
ERR2199854 MDR-TB lineage2.2.1 de
SRR1172034 Pre-XDR-TB lineage2.2.1 None
SRR13232739 Pre-XDR-TB lineage2.2.1 None
ERR019575 MDR-TB lineage2.2.1 ru
ERR11044028 MDR-TB lineage4.1.1.1 None
SRR16088518 MDR-TB lineage2.2.1 None
SRR3544733 Pre-XDR-TB lineage2.2.1 None
SRR7516305 Pre-XDR-TB lineage2.2.1 None
ERR403299 HR-TB lineage2.2.1;lineage4.2.1.1;lineage4.8 None
ERR11773802 Pre-XDR-TB lineage2.2.1 None
ERR4821385 Pre-XDR-TB lineage2.2.1 None
SRR6785197 MDR-TB lineage2.2.1 None
ERR5865232 MDR-TB lineage2.2.1 None
SRR6257007 MDR-TB lineage2.2.1 ru
SRR6257030 MDR-TB lineage2.2.1 ru
SRR28239619 MDR-TB lineage2.2.1 None
ERR10762280 MDR-TB lineage2.2.1 None
SRR5153608 Pre-XDR-TB lineage2.2.1 None
ERR067611 MDR-TB lineage2.2.1 ru
ERR067621 MDR-TB lineage2.2.1 ru
SRR6785539 MDR-TB lineage2.2.1 None
ERR067623 Pre-XDR-TB lineage2.2.1 ru
SRR6353884 MDR-TB lineage2.2.1 None
ERR133845 Pre-XDR-TB lineage2.2.1 ru
ERR133853 MDR-TB lineage2.2.1 ru
ERR133867 MDR-TB lineage2.2.1 ru
ERR133927 MDR-TB lineage2.2.1 ru
ERR133910 Pre-XDR-TB lineage2.2.1 ru
ERR133931 MDR-TB lineage2.2.1 ru
ERR137272 MDR-TB lineage2.2.1 ru
ERR144553 MDR-TB lineage2.2.1 ru
ERR11798558 MDR-TB lineage2.2.1 None
ERR229916 Pre-XDR-TB lineage2.2.1 ru
ERR234606 MDR-TB lineage2.2.1 ru
SRR6485116 MDR-TB lineage2.2.1 None
SRR28888071 XDR-TB lineage2.2.1 None
SRR16088109 MDR-TB lineage2.2.1 None
ERR234628 MDR-TB lineage2.2.1 ru
SRR29356710 MDR-TB lineage2.2.1 None
ERR027450 MDR-TB lineage2.2.1 ru
SRR7657752 Pre-XDR-TB lineage2.2.1 None
SRR29056130 Pre-XDR-TB lineage2.2.1 None
ERR5865874 Pre-XDR-TB lineage2.2.1 None
SRR28239840 MDR-TB lineage2.2.1 None
SRR29539793 MDR-TB lineage2.2.1 None
ERR5865435 MDR-TB lineage2.2.1 None
ERR4276862 MDR-TB lineage4.1.1.1 None
SRR5152942 Pre-XDR-TB lineage2.2.1 None
SRR23310823 Pre-XDR-TB lineage2.2.1 None
SRR6353886 Pre-XDR-TB lineage2.2.1 None
SRR6484845 Pre-XDR-TB lineage2.2.1 None
ERR11044291 Pre-XDR-TB lineage2.2.1 None
SRR6831708 MDR-TB lineage2.2.1 None
SRR5818579 MDR-TB lineage4.1.1.1 dj
SRR5818583 MDR-TB lineage4.1.1.1 dj
ERR5864652 MDR-TB lineage2.2.1 None
ERR5864653 MDR-TB lineage2.2.1 None
ERR5864683 MDR-TB lineage2.2.1 None
ERR5864817 Pre-XDR-TB lineage2.2.1 None
ERR5865723 MDR-TB lineage2.2.1 None
ERR3639791 MDR-TB lineage2.2.1 None
ERR2199799 MDR-TB lineage2.2.1 de
SRR5152944 Pre-XDR-TB lineage2.2.1 None
SRR5153709 Pre-XDR-TB lineage2.2.1 None
SRR6832638 Pre-XDR-TB lineage2.2.1 None
ERR11043700 Pre-XDR-TB lineage2.2.1 None
ERR11081978 MDR-TB lineage2.2.1 None
ERR11082348 MDR-TB lineage2.2.1 None
ERR108422 MDR-TB lineage2.2.1;lineage4.3.3 ru
ERR234602 MDR-TB lineage2.2.1 ru
SRR18715062 MDR-TB lineage2.2.1 None
ERR5865778 MDR-TB lineage2.2.1 None
SRR29539783 Pre-XDR-TB lineage2.2.1 None
ERR067662 MDR-TB lineage2.2.1 ru
ERR067652 MDR-TB lineage2.2.1 ru
ERR067710 MDR-TB lineage2.2.1 ru
ERR067698 MDR-TB lineage2.2.1 ru
ERR067720 Pre-XDR-TB lineage2.2.1 ru
ERR067739 MDR-TB lineage2.2.1 ru
ERR067741 MDR-TB lineage2.2.1 ru
ERR108484 MDR-TB lineage2.2.1 ru
ERR108491 MDR-TB lineage2.2.1 ru
ERR133848 Pre-XDR-TB lineage2.2.1 ru
ERR133957 MDR-TB lineage2.2.1 ru
ERR137203 MDR-TB lineage2.2.1 ru
ERR137211 MDR-TB lineage2.2.1 ru
ERR137237 MDR-TB lineage2.2.1 ru
ERR144615 MDR-TB lineage2.2.1 ru
ERR158597 MDR-TB lineage2.2.1 ru
ERR227978 MDR-TB lineage2.2.1 ru
ERR227995 MDR-TB lineage2.2.1 ru
ERR228054 MDR-TB lineage2.2.1 ru
ERR229933 MDR-TB lineage2.2.1 ru
ERR229980 MDR-TB lineage2.2.1 ru
ERR234568 Pre-XDR-TB lineage2.2.1 ru
ERR234595 MDR-TB lineage2.2.1 ru
ERR234615 Pre-XDR-TB lineage2.2.1 ru
ERR5865363 MDR-TB lineage2.2.1 None
ERR13276111 HR-TB lineage2.2.1 None
ERR5866574 MDR-TB lineage2.2.1 None
SRR18715463 MDR-TB lineage2.2.1 None
SRR7517822 Pre-XDR-TB lineage2.2.1 ch
ERR13292566 MDR-TB lineage2.2.1 None
ERR027458 MDR-TB lineage2.2.1 ru
ERR067630 MDR-TB lineage2.2.1 ru
ERR133885 MDR-TB lineage2.2.1 ru
SRR10380248 MDR-TB lineage2.2.1 None
ERR108467 MDR-TB lineage2.2.1 ru
ERR137225 MDR-TB lineage2.2.1 ru
SRR24710165 Pre-XDR-TB lineage2.2.1 None
SRR7516304 Pre-XDR-TB lineage2.2.1 None
ERR027467 Pre-XDR-TB lineage2.2.1 None
ERR11773812 MDR-TB lineage2.2.1 None
ERR11043209 MDR-TB lineage2.2.1 None
ERR2517083 MDR-TB lineage2.2.1 gb
ERR5865837 MDR-TB lineage2.2.1 None
SRR6485004 MDR-TB lineage2.2.1 None
SRR6356997 MDR-TB lineage2.2.1 None
ERR4829853 MDR-TB lineage2.2.1 None
ERR550838 MDR-TB lineage2.2.1 None
ERR5865233 MDR-TB lineage2.2.1 None
SRR5153620 MDR-TB lineage2.2.1 None