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SRA data
Rv3854c
- c.-7T>C
Drug resistance types
0 Sensitive
1 RR-TB
5 HR-TB
529 MDR-TB
175 Pre-XDR-TB
9 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
667
lineage4.1.1.1
19
lineage2.2.1;lineage4
9
lineage2.2.1;lineage4.3.3
5
lineage2.2.1;lineage4.2.1
3
lineage2.2.1;lineage4.8
3
lineage2.2.1;lineage3
2
lineage4.8
2
lineage2.2.1;lineage4.1.2.1
2
lineage4.2.2.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
721
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR017795
Pre-XDR-TB
lineage2.2.1
None
ERR017799
Pre-XDR-TB
lineage2.2.1
None
ERR019564
MDR-TB
lineage2.2.1
ru
ERR019575
MDR-TB
lineage2.2.1
ru
ERR027450
MDR-TB
lineage2.2.1
ru
ERR027455
MDR-TB
lineage2.2.1
ru
ERR027458
MDR-TB
lineage2.2.1
ru
ERR027463
Pre-XDR-TB
lineage2.2.1
None
ERR027467
Pre-XDR-TB
lineage2.2.1
None
ERR067576
MDR-TB
lineage2.2.1
ru
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