Rv3854c - c.-7T>C


Drug resistance types
0 Sensitive 1 RR-TB 4 HR-TB 445 MDR-TB 162 Pre-XDR-TB 9 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 579
lineage4.1.1.1 13
lineage2.2.1;lineage4.8 3
lineage2.2.2 1
lineage2.2.1;lineage4 9
lineage2.2.1;lineage3 2
lineage2.2.1;lineage4.3.3 4
lineage2.2.1;lineage4.2.1;lineage4.3.3 1
lineage2.2.1;lineage4.2.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage4.1.2.1 1
lineage2.2.1;lineage5 1
lineage4.2.2.2 1
lineage3 1
lineage2.2.1;lineage4.2.1.1;lineage4.8 1
lineage4.8 1
lineage2.2.1;lineage4.2.1.1 1
lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 623
Geographic prevalence
Country level data for this variant is available for 264 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6356999 MDR-TB lineage2.2.1 None
ERR4276862 MDR-TB lineage4.1.1.1 None
ERR228013 MDR-TB lineage2.2.1 ru
ERR9286038 Pre-XDR-TB lineage2.2.1 None
SRR1180166 Pre-XDR-TB lineage2.2.1 None
ERR11043640 MDR-TB lineage2.2.1 None
ERR234598 Pre-XDR-TB lineage2.2.1 ru
ERR5865204 MDR-TB lineage2.2.1 None
ERR067750 Pre-XDR-TB lineage2.2.1 ru
ERR067621 MDR-TB lineage2.2.1 ru
ERR484733 MDR-TB lineage2.2.1;lineage4.8 None
ERR133906 MDR-TB lineage2.2.1 ru
ERR11044017 MDR-TB lineage4.1.1.1 None
ERR229962 Pre-XDR-TB lineage2.2.1 ru
ERR5865959 MDR-TB lineage2.2.1 None
SRR6930890 Pre-XDR-TB lineage2.2.2 None
SRR28239932 MDR-TB lineage2.2.1 None
ERR144620 MDR-TB lineage2.2.1;lineage4 ru
SAMN02414916 MDR-TB lineage2.2.1 se
ERR067623 Pre-XDR-TB lineage2.2.1 ru
ERR5865753 MDR-TB lineage2.2.1 None
SRR6916544 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR067720 Pre-XDR-TB lineage2.2.1 ru
ERR2864286 MDR-TB lineage2.2.1 pt
SRR7652978 Pre-XDR-TB lineage2.2.1 None
ERR067758 MDR-TB lineage2.2.1 ru
ERR144590 MDR-TB lineage2.2.1 ru
SRR23861879 Pre-XDR-TB lineage2.2.1 None
ERR133831 MDR-TB lineage2.2.1 ru
ERR133816 MDR-TB lineage2.2.1 None
ERR067754 MDR-TB lineage2.2.1 ru
ERR067742 MDR-TB lineage2.2.1 ru
ERR2307540 MDR-TB lineage2.2.1 None
ERR144562 MDR-TB lineage2.2.1 ru
ERR133935 MDR-TB lineage2.2.1 ru
ERR10762263 MDR-TB lineage2.2.1 None
ERR11043274 MDR-TB lineage2.2.1 None
ERR234653 Pre-XDR-TB lineage2.2.1 ru
ERR5865639 MDR-TB lineage2.2.1 None
ERR403268 MDR-TB lineage2.2.1 None
SRR6785170 MDR-TB lineage2.2.1 None
SRR1174308 Pre-XDR-TB lineage2.2.1 None
ERR108484 MDR-TB lineage2.2.1 ru
ERR11068995 MDR-TB lineage2.2.1 None
ERR5866476 MDR-TB lineage2.2.1 None
ERR144548 MDR-TB lineage2.2.1 ru
ERR4797580 Pre-XDR-TB lineage2.2.1 in
ERR137220 MDR-TB lineage2.2.1 ru
SRR6832638 Pre-XDR-TB lineage2.2.1 None
ERR5866448 MDR-TB lineage2.2.1 None
SRR10380248 MDR-TB lineage2.2.1 None
ERR229997 MDR-TB lineage2.2.1 ru
SRR23310860 Pre-XDR-TB lineage2.2.1 None
ERR11081978 MDR-TB lineage2.2.1 None
ERR229994 MDR-TB lineage2.2.1 ru
ERR403266 MDR-TB lineage2.2.1 None
SRR6785362 MDR-TB lineage2.2.1 None
ERR067620 MDR-TB lineage2.2.1 ru
ERR144553 MDR-TB lineage2.2.1 ru
ERR11043896 MDR-TB lineage2.2.1 None
ERR067698 MDR-TB lineage2.2.1 ru
ERR017799 Pre-XDR-TB lineage2.2.1 None
ERR11043637 MDR-TB lineage2.2.1 None
SRR23861775 MDR-TB lineage2.2.1 None
ERR137226 MDR-TB lineage2.2.1 None
ERR5865750 MDR-TB lineage2.2.1 None
ERR137225 MDR-TB lineage2.2.1 ru
ERR5865751 MDR-TB lineage2.2.1 None
SRR6356946 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR7911024 MDR-TB lineage2.2.1 md
ERR133853 MDR-TB lineage2.2.1 ru
ERR228043 MDR-TB lineage2.2.1 ru
ERR4827649 MDR-TB lineage2.2.1 None
ERR144633 MDR-TB lineage2.2.1 ru
ERR137210 MDR-TB lineage2.2.1 ru
SRR1162881 MDR-TB lineage2.2.1 None
ERR5865232 MDR-TB lineage2.2.1 None
ERR11081278 MDR-TB lineage2.2.1 None
ERR067765 MDR-TB lineage2.2.1 ru
ERR5865752 MDR-TB lineage2.2.1 None
ERR5865363 MDR-TB lineage2.2.1 None
ERR5866207 MDR-TB lineage2.2.1 None
ERR4822315 MDR-TB lineage4.1.1.1 de
ERR117460 MDR-TB lineage2.2.1 ru
SAMN02628483 Pre-XDR-TB lineage2.2.1 ir
SRR6807673 MDR-TB lineage2.2.1 None
SRR5761430 MDR-TB lineage2.2.1 None
ERR019564 MDR-TB lineage2.2.1 ru
SRR6353886 Pre-XDR-TB lineage2.2.1 None
ERR5866475 MDR-TB lineage2.2.1 None
ERR4828041 MDR-TB lineage2.2.1 None
SRR6484847 MDR-TB lineage2.2.1 None
SRR6485126 MDR-TB lineage2.2.1 None
ERR553238 MDR-TB lineage2.2.1 de
ERR5866391 Pre-XDR-TB lineage2.2.1 None
SRR16115884 MDR-TB lineage2.2.1 None
ERR117468 MDR-TB lineage2.2.1 ru
ERR067643 MDR-TB lineage2.2.1 ru
ERR067630 MDR-TB lineage2.2.1 ru
ERR133860 MDR-TB lineage2.2.1 ru
ERR11082651 MDR-TB lineage2.2.1 None
ERR108502 MDR-TB lineage2.2.1 ru
ERR5866447 MDR-TB lineage2.2.1 None
SRR1173347 Pre-XDR-TB lineage2.2.1 None
ERR7910955 MDR-TB lineage2.2.1 None
ERR5864815 Pre-XDR-TB lineage2.2.1 None
ERR228020 MDR-TB lineage2.2.1 ru
ERR228054 MDR-TB lineage2.2.1 ru
ERR229984 Pre-XDR-TB lineage2.2.1 ru
ERR133959 MDR-TB lineage2.2.1 ru
ERR5865404 MDR-TB lineage2.2.1 None
ERR5866393 Pre-XDR-TB lineage2.2.1 None
ERR5864655 MDR-TB lineage2.2.1 None
ERR403250 MDR-TB lineage2.2.1 None
SRR28888082 XDR-TB lineage2.2.1 None
SRR28351390 Pre-XDR-TB lineage2.2.1 None
SRR28498565 Pre-XDR-TB lineage2.2.1 None
ERR11773832 MDR-TB lineage2.2.1 None
SRR28351658 Pre-XDR-TB lineage2.2.1 None
SRR28239840 MDR-TB lineage2.2.1 None
SRR28351408 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR28888052 XDR-TB lineage2.2.1 None
ERR11773793 Pre-XDR-TB lineage2.2.1 None
ERR229923 MDR-TB lineage2.2.1 ru
SRR7517822 Pre-XDR-TB lineage2.2.1 ch
ERR027467 Pre-XDR-TB lineage2.2.1 None
ERR067651 MDR-TB lineage2.2.1 ru
ERR229980 MDR-TB lineage2.2.1 ru
ERR067721 MDR-TB lineage2.2.1 ru
ERR11043700 Pre-XDR-TB lineage2.2.1 None
ERR144636 Pre-XDR-TB lineage2.2.1 ru
ERR5865405 MDR-TB lineage2.2.1 None
ERR550838 MDR-TB lineage2.2.1 None
ERR234622 MDR-TB lineage2.2.1 ru
ERR229960 Pre-XDR-TB lineage2.2.1 ru
ERR133919 MDR-TB lineage2.2.1 ru
SRR6785293 MDR-TB lineage2.2.1 None
SRR6257007 MDR-TB lineage2.2.1 ru
SRR23310936 Pre-XDR-TB lineage2.2.1 None
ERR108458 MDR-TB lineage2.2.1 ru
ERR403271 MDR-TB lineage2.2.1 None
ERR5865992 MDR-TB lineage2.2.1 None
ERR4821385 Pre-XDR-TB lineage2.2.1 None
ERR067660 MDR-TB lineage2.2.1 ru
ERR5866392 Pre-XDR-TB lineage2.2.1 None
ERR117462 Pre-XDR-TB lineage2.2.1 ru
ERR229924 MDR-TB lineage2.2.1 ru
ERR234568 Pre-XDR-TB lineage2.2.1 ru
SRR28239619 MDR-TB lineage2.2.1 None
ERR234666 MDR-TB lineage2.2.1;lineage4 ru
ERR5865364 MDR-TB lineage2.2.1 None
ERR108489 MDR-TB lineage2.2.1 ru
SRR6485145 MDR-TB lineage2.2.1 None
ERR228061 MDR-TB lineage2.2.1 ru
ERR7911377 MDR-TB lineage2.2.1 us
ERR7910936 MDR-TB lineage2.2.1 None
ERR9286037 Pre-XDR-TB lineage2.2.1 None
SRR7655785 Pre-XDR-TB lineage2.2.1 None
SAMN02628484 Pre-XDR-TB lineage2.2.1 ir
ERR017795 Pre-XDR-TB lineage2.2.1 None
ERR11243544 MDR-TB lineage2.2.1 None
ERR5865777 MDR-TB lineage2.2.1 None
ERR5866519 MDR-TB lineage2.2.1 None
SRR1173684 Pre-XDR-TB lineage2.2.1 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR234560 Pre-XDR-TB lineage2.2.1 ru
SRR7653017 Pre-XDR-TB lineage2.2.1 None
ERR5866157 MDR-TB lineage2.2.1 None
ERR5865724 MDR-TB lineage2.2.1 None
ERR2516584 MDR-TB lineage2.2.1 nl
ERR11043414 MDR-TB lineage2.2.1 None
ERR227987 MDR-TB lineage2.2.1 ru
SRR6257022 Pre-XDR-TB lineage2.2.1 None
SRR5153608 Pre-XDR-TB lineage2.2.1 None
SRR7655782 MDR-TB lineage2.2.1 None
ERR144617 MDR-TB lineage2.2.1 None
ERR403267 MDR-TB lineage2.2.1;lineage4.8 None
ERR234618 MDR-TB lineage2.2.1 ru
ERR11081600 MDR-TB lineage2.2.1 None
ERR158576 MDR-TB lineage2.2.1 ru
SRR1172091 Pre-XDR-TB lineage2.2.1 None
SRR6485010 MDR-TB lineage2.2.1 None
ERR9119681 Pre-XDR-TB lineage2.2.1 None
ERR5864682 MDR-TB lineage2.2.1 None
ERR5864688 MDR-TB lineage2.2.1 None
SRR24709984 XDR-TB lineage2.2.1 None
ERR550837 MDR-TB lineage2.2.1 None
ERR11069034 MDR-TB lineage2.2.1 None
SRR18911238 MDR-TB lineage2.2.1 None
ERR5865825 MDR-TB lineage2.2.1 None
ERR228046 MDR-TB lineage2.2.1 ru
SRR6257082 MDR-TB lineage2.2.1 ru
ERR234606 MDR-TB lineage2.2.1 ru
ERR234608 MDR-TB lineage2.2.1 ru
ERR5865235 Other lineage2.2.1 None
ERR133806 MDR-TB lineage2.2.1 ru
SRR6485074 MDR-TB lineage2.2.1 None
ERR234660 MDR-TB lineage2.2.1 ru
SRR5153222 Pre-XDR-TB lineage2.2.1 None
ERR403273 MDR-TB lineage2.2.1 None
ERR133845 Pre-XDR-TB lineage2.2.1 ru
ERR4276904 MDR-TB lineage4.1.1.1 None
SRR7654040 HR-TB lineage2.2.1 None
ERR3639791 MDR-TB lineage2.2.1 None
ERR144591 Pre-XDR-TB lineage2.2.1 ru
ERR5866574 MDR-TB lineage2.2.1 None
ERR158586 MDR-TB lineage2.2.1 ru
ERR5865362 MDR-TB lineage2.2.1 None
ERR067762 MDR-TB lineage2.2.1 ru
ERR133867 MDR-TB lineage2.2.1 ru
ERR5864686 MDR-TB lineage2.2.1 None
ERR5865788 MDR-TB lineage2.2.1 None
SRR24256109 MDR-TB lineage2.2.1 None
ERR1023400 MDR-TB lineage2.2.1 None
ERR067739 MDR-TB lineage2.2.1 ru
ERR403303 MDR-TB lineage2.2.1 None
SAMN02414939 MDR-TB lineage4.1.1.1 se
ERR5865997 MDR-TB lineage2.2.1 None
ERR11069099 MDR-TB lineage2.2.1 None
ERR137275 Pre-XDR-TB lineage2.2.1 ru
ERR067587 MDR-TB lineage2.2.1 ru
ERR4828054 MDR-TB lineage2.2.1 None
ERR137269 MDR-TB lineage2.2.1 ru
SRR6785197 MDR-TB lineage2.2.1 None
ERR403316 MDR-TB lineage2.2.1 None
ERR5865776 MDR-TB lineage2.2.1 None
SRR7516304 Pre-XDR-TB lineage2.2.1 None
ERR158611 MDR-TB lineage2.2.1 ru
SRR6785451 MDR-TB lineage2.2.1 None
ERR108507 Pre-XDR-TB lineage2.2.1 ru
ERR11081734 MDR-TB lineage2.2.1 None
SRR7655612 MDR-TB lineage2.2.1 None
ERR027450 MDR-TB lineage2.2.1 ru
ERR133902 MDR-TB lineage2.2.1 ru
ERR230008 MDR-TB lineage2.2.1 ru
ERR5864683 MDR-TB lineage2.2.1 None
ERR234613 MDR-TB lineage2.2.1;lineage4.3.3 None
ERR5866540 MDR-TB lineage2.2.1 None
ERR5864687 MDR-TB lineage2.2.1 None
ERR067710 MDR-TB lineage2.2.1 ru
ERR227995 MDR-TB lineage2.2.1 ru
SRR6256985 Pre-XDR-TB lineage2.2.1 ru
ERR108438 MDR-TB lineage2.2.1;lineage4.2.1;lineage4.3.3 None
SRR11033719 MDR-TB lineage2.2.1 None
SRR6256984 MDR-TB lineage2.2.1 ru
ERR108462 MDR-TB lineage2.2.1 ru
ERR108491 MDR-TB lineage2.2.1 ru
ERR137283 MDR-TB lineage2.2.1 ru
SRR5818583 MDR-TB lineage4.1.1.1 dj
SRR6484899 Other lineage2.2.1 None
SRR28240211 MDR-TB lineage2.2.1 None
ERR228050 MDR-TB lineage2.2.1 ru
SRR7657753 MDR-TB lineage2.2.1 None
SRR24255937 MDR-TB lineage2.2.1 None
SRR5153620 MDR-TB lineage2.2.1 None
ERR11067853 MDR-TB lineage2.2.1 None
ERR133827 MDR-TB lineage2.2.1 ru
ERR234609 MDR-TB lineage2.2.1 ru
SRR24255905 Pre-XDR-TB lineage2.2.1 None
ERR067613 MDR-TB lineage2.2.1 ru
ERR144611 Pre-XDR-TB lineage2.2.1 ru
ERR137248 Pre-XDR-TB lineage2.2.1 ru
SRR5153228 MDR-TB lineage2.2.1 None
ERR403301 Pre-XDR-TB lineage2.2.1 None
SRR16088109 MDR-TB lineage2.2.1 None
ERR11243546 MDR-TB lineage2.2.1 None
ERR133895 MDR-TB lineage2.2.1 ru
ERR067741 MDR-TB lineage2.2.1 ru
ERR5865406 MDR-TB lineage2.2.1 None
ERR227993 MDR-TB lineage2.2.1;lineage4.2.1 None
ERR2516866 MDR-TB lineage2.2.1 gb
SRR6831708 MDR-TB lineage2.2.1 None
ERR11773758 Pre-XDR-TB lineage2.2.1 None
SRR28888080 XDR-TB lineage2.2.1 None
ERR11773836 MDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR11773802 Pre-XDR-TB lineage2.2.1 None
SRR28393755 MDR-TB lineage4.1.2.1 None
ERR11773823 Pre-XDR-TB lineage2.2.1 None
ERR3335785 Pre-XDR-TB lineage2.2.1 pk
ERR5865435 MDR-TB lineage2.2.1 None
ERR137237 MDR-TB lineage2.2.1 ru
ERR144615 MDR-TB lineage2.2.1 ru
SRR14801645 MDR-TB lineage2.2.1 None
SRR18715062 MDR-TB lineage2.2.1 None
ERR5864652 MDR-TB lineage2.2.1 None
ERR5864653 MDR-TB lineage2.2.1 None
ERR229947 Pre-XDR-TB lineage2.2.1 ru
ERR5865837 MDR-TB lineage2.2.1 None
ERR5865365 MDR-TB lineage2.2.1 None
SRR6356997 MDR-TB lineage2.2.1 None
ERR4827935 MDR-TB lineage2.2.1;lineage5 None
ERR11082705 MDR-TB lineage2.2.1 None
ERR137223 Pre-XDR-TB lineage2.2.1 ru
SAMN02628485 Pre-XDR-TB lineage2.2.1 ir
ERR2199854 MDR-TB lineage2.2.1 de
SRR6785274 Pre-XDR-TB lineage2.2.1 None
SRR13232739 Pre-XDR-TB lineage2.2.1 None
SRR7652970 Pre-XDR-TB lineage2.2.1 None
SRR23339949 MDR-TB lineage2.2.1 None
ERR5864684 MDR-TB lineage2.2.1 None
SAMN02628508 Pre-XDR-TB lineage2.2.1 ir
ERR227996 Pre-XDR-TB lineage2.2.1 ru
ERR234574 MDR-TB lineage2.2.1 ru
ERR144543 Pre-XDR-TB lineage2.2.1 ru
SRR5153617 Pre-XDR-TB lineage2.2.1 None
ERR228017 MDR-TB lineage2.2.1 ru
ERR144600 Pre-XDR-TB lineage2.2.1 ru
ERR067695 MDR-TB lineage2.2.1 ru
ERR3275831 MDR-TB lineage2.2.1 nl
ERR234576 Pre-XDR-TB lineage2.2.1 ru
ERR5866209 MDR-TB lineage2.2.1 None
SRR7653080 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
SRR5153086 Pre-XDR-TB lineage2.2.1 None
SRR24256281 MDR-TB lineage2.2.1 None
SRR1166926 MDR-TB lineage4.1.1.1 None
SRR5153815 Pre-XDR-TB lineage2.2.1 None
ERR2199853 MDR-TB lineage2.2.1 None
ERR403282 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR5866463 MDR-TB lineage2.2.1 None
ERR137277 MDR-TB lineage2.2.1 ru
ERR137272 MDR-TB lineage2.2.1 ru
ERR133826 MDR-TB lineage2.2.1 ru
ERR067583 MDR-TB lineage2.2.1 ru
ERR234633 Pre-XDR-TB lineage2.2.1 ru
ERR11083017 MDR-TB lineage2.2.1 None
ERR234563 MDR-TB lineage2.2.1 ru
SRR6353887 Pre-XDR-TB lineage2.2.1 None
ERR133839 MDR-TB lineage2.2.1 ru
ERR067709 MDR-TB lineage2.2.1 ru
ERR2516949 MDR-TB lineage2.2.1 gb
ERR5864818 MDR-TB lineage2.2.1 None
ERR137230 MDR-TB lineage2.2.1 ru
ERR229998 MDR-TB lineage2.2.1 ru
ERR133972 MDR-TB lineage2.2.1;lineage4.8 None
ERR133843 Pre-XDR-TB lineage2.2.1 ru
ERR5865638 MDR-TB lineage2.2.1 None
ERR144597 MDR-TB lineage2.2.1 ru
SRR6484937 Pre-XDR-TB lineage2.2.1 None
ERR158613 MDR-TB lineage2.2.1 ru
ERR234621 MDR-TB lineage2.2.1 ru
ERR5866195 MDR-TB lineage2.2.1 None
ERR234590 Pre-XDR-TB lineage2.2.1 ru
ERR067627 MDR-TB lineage2.2.1 ru
SRR14781907 Pre-XDR-TB lineage2.2.1 None
ERR144593 Pre-XDR-TB lineage2.2.1 ru
ERR5864650 MDR-TB lineage2.2.1 None
ERR133927 MDR-TB lineage2.2.1 ru
SRR14802147 MDR-TB lineage2.2.1 None
ERR133805 MDR-TB lineage2.2.1 ru
ERR229918 MDR-TB lineage2.2.1 ru
ERR5864651 MDR-TB lineage2.2.1 None
ERR133854 Pre-XDR-TB lineage2.2.1 ru
SRR6785539 MDR-TB lineage2.2.1 None
ERR229922 MDR-TB lineage2.2.1 ru
ERR144632 MDR-TB lineage2.2.1 ru
SRR24673553 MDR-TB lineage2.2.1 None
SRR7516305 Pre-XDR-TB lineage2.2.1 None
ERR11044291 Pre-XDR-TB lineage2.2.1 None
ERR027455 MDR-TB lineage2.2.1 ru
ERR133931 MDR-TB lineage2.2.1 ru
SRR1172034 Pre-XDR-TB lineage2.2.1 None
ERR5865723 MDR-TB lineage2.2.1 None
ERR234595 MDR-TB lineage2.2.1 ru
ERR133866 MDR-TB lineage2.2.1 ru
ERR5865874 Pre-XDR-TB lineage2.2.1 None
ERR4827933 Pre-XDR-TB lineage2.2.1 None
SRR6485099 Pre-XDR-TB lineage2.2.1 None
ERR2510881 MDR-TB lineage2.2.1 it
SRR18911993 MDR-TB lineage2.2.1 None
ERR5866197 MDR-TB lineage2.2.1 None
ERR137204 Pre-XDR-TB lineage2.2.1 ru
ERR5866196 MDR-TB lineage2.2.1 None
ERR4827732 MDR-TB lineage2.2.1 None
ERR10762280 MDR-TB lineage2.2.1 None
SRR1165525 MDR-TB lineage4.1.1.1 None
ERR2677407 MDR-TB lineage2.2.1 de
ERR4799716 Pre-XDR-TB lineage4.2.2.2 in
SRR998861 MDR-TB lineage2.2.1 None
SRR6485116 MDR-TB lineage2.2.1 None
ERR403221 MDR-TB lineage2.2.1 None
SRR6356954 Pre-XDR-TB lineage2.2.1 None
ERR234637 MDR-TB lineage2.2.1 ru
ERR2307435 MDR-TB lineage2.2.1 None
SRR7653024 Pre-XDR-TB lineage2.2.1 None
SRR1162886 MDR-TB lineage4.1.1.1 None
ERR5866158 MDR-TB lineage2.2.1 None
SRR13232735 MDR-TB lineage2.2.1 None
SRR6484984 Pre-XDR-TB lineage2.2.1 None
ERR137222 MDR-TB lineage2.2.1 ru
ERR11081365 MDR-TB lineage2.2.1 None
ERR7362042 MDR-TB lineage2.2.1;lineage4 None
SRR5152942 Pre-XDR-TB lineage2.2.1 None
ERR5865787 MDR-TB lineage2.2.1 None
ERR550838_ERR550837 MDR-TB lineage2.2.1 None
ERR2516759 MDR-TB lineage2.2.1 gb
ERR2516973 MDR-TB lineage2.2.1 gb
SRR7653015 Pre-XDR-TB lineage2.2.1 None
SRR5153709 Pre-XDR-TB lineage2.2.1 None
ERR3639769 MDR-TB lineage2.2.1 None
ERR067704 Pre-XDR-TB lineage2.2.1 ru
SRR17658014 MDR-TB lineage2.2.1 None
ERR403284 Pre-XDR-TB lineage2.2.1 None
ERR133848 Pre-XDR-TB lineage2.2.1 ru
ERR234628 MDR-TB lineage2.2.1 ru
ERR5864816 Pre-XDR-TB lineage2.2.1 None
ERR108422 MDR-TB lineage2.2.1;lineage4.3.3 ru
SRR1144810 MDR-TB lineage2.2.1 None
SRR7653027 Pre-XDR-TB lineage2.2.1 None
ERR117453 Pre-XDR-TB lineage2.2.1 ru
SRR10397138 MDR-TB lineage2.2.1 None
ERR234615 Pre-XDR-TB lineage2.2.1 ru
SRR7657752 Pre-XDR-TB lineage2.2.1 None
ERR144551 Pre-XDR-TB lineage2.2.1 ru
ERR11043123 MDR-TB lineage2.2.1 None
ERR11243545 MDR-TB lineage2.2.1 None
SRR6785156 MDR-TB lineage2.2.1 None
ERR228064 MDR-TB lineage2.2.1 ru
ERR5866159 MDR-TB lineage2.2.1 None
ERR144561 MDR-TB lineage2.2.1 ru
ERR067673 MDR-TB lineage2.2.1 ru
ERR067656 MDR-TB lineage2.2.1 ru
ERR8774359 MDR-TB lineage2.2.1 None
ERR133908 Pre-XDR-TB lineage2.2.1 ru
ERR067611 MDR-TB lineage2.2.1 ru
ERR11773812 MDR-TB lineage2.2.1 None
SRR28888071 XDR-TB lineage2.2.1 None
ERR11773807 Pre-XDR-TB lineage2.2.1 None
SRR28714181 XDR-TB lineage2.2.1 None
SRR28888081 XDR-TB lineage2.2.1 None
SRR28888050 XDR-TB lineage2.2.1 None
SRR28498720 MDR-TB lineage2.2.1 None
SRR28888083 XDR-TB lineage2.2.1 None
ERR027458 MDR-TB lineage2.2.1 ru
SRR5152944 Pre-XDR-TB lineage2.2.1 None
ERR5865875 Pre-XDR-TB lineage2.2.1 None
ERR11798558 MDR-TB lineage2.2.1 None
SRR6832254 MDR-TB lineage2.2.1 None
ERR5865233 MDR-TB lineage2.2.1 None
ERR234602 MDR-TB lineage2.2.1 ru
ERR5865838 Pre-XDR-TB lineage2.2.1 None
ERR5864685 MDR-TB lineage2.2.1 None
ERR11050157 MDR-TB lineage2.2.1 None
ERR108503 MDR-TB lineage2.2.1 ru
ERR403313 MDR-TB lineage2.2.1 None
ERR144628 MDR-TB lineage2.2.1 ru
SRR6353884 MDR-TB lineage2.2.1 None
ERR11082657 MDR-TB lineage2.2.1 None
ERR108473 MDR-TB lineage2.2.1 ru
ERR4800148 HR-TB lineage3 None
ERR133915 MDR-TB lineage2.2.1 ru
ERR5865139 MDR-TB lineage2.2.1 None
ERR227978 MDR-TB lineage2.2.1 ru
ERR11043418 MDR-TB lineage2.2.1 None
ERR5865138 MDR-TB lineage2.2.1 None
ERR2516826 MDR-TB lineage2.2.1 gb
SRR6832573 Pre-XDR-TB lineage2.2.1;lineage4 None
SRR6485004 MDR-TB lineage2.2.1 None
ERR5866499 MDR-TB lineage2.2.1 None
ERR4827570 Pre-XDR-TB lineage2.2.1 None
ERR137211 MDR-TB lineage2.2.1 ru
ERR11081599 MDR-TB lineage2.2.1 None
ERR5865826 MDR-TB lineage2.2.1 None
SRR6484925 MDR-TB lineage2.2.1 None
SRR10397213 MDR-TB lineage2.2.1 None
SRR6257104 MDR-TB lineage2.2.1 None
ERR137262 MDR-TB lineage2.2.1 ru
ERR5865778 MDR-TB lineage2.2.1 None
ERR133885 MDR-TB lineage2.2.1 ru
ERR133910 Pre-XDR-TB lineage2.2.1 ru
ERR234623 MDR-TB lineage2.2.1 ru
SRR6485078 RR-TB lineage2.2.1 None
ERR4829378 Pre-XDR-TB lineage2.2.1 it
ERR228012 MDR-TB lineage2.2.1 ru
ERR067717 Pre-XDR-TB lineage2.2.1 ru
ERR067663 MDR-TB lineage2.2.1 ru
ERR403240 MDR-TB lineage2.2.1 None
ERR5865437 MDR-TB lineage2.2.1 None
SRR6785416 HR-TB lineage2.2.1 None
ERR133868 MDR-TB lineage2.2.1 ru
ERR067622 MDR-TB lineage2.2.1 ru
SRR28240155 MDR-TB lineage2.2.1 None
SRR6484845 Pre-XDR-TB lineage2.2.1 None
SRR1183088 Pre-XDR-TB lineage2.2.1 None
ERR228029 MDR-TB lineage2.2.1 ru
ERR228003 MDR-TB lineage2.2.1 ru
ERR108493 MDR-TB lineage2.2.1 ru
ERR144556 MDR-TB lineage2.2.1;lineage4 ru
SRR23310823 Pre-XDR-TB lineage2.2.1 None
ERR229933 MDR-TB lineage2.2.1 ru
ERR229966 MDR-TB lineage2.2.1 ru
ERR11082348 MDR-TB lineage2.2.1 None
ERR067652 MDR-TB lineage2.2.1 ru
ERR5865436 MDR-TB lineage2.2.1 None
SRR6831810 Pre-XDR-TB lineage2.2.1 None
ERR11081254 MDR-TB lineage2.2.1 None
ERR158592 MDR-TB lineage2.2.1 ru
SRR16088518 MDR-TB lineage2.2.1 None
ERR137203 MDR-TB lineage2.2.1 ru
SRR5153712 Pre-XDR-TB lineage2.2.1 None
SRR6256992 Pre-XDR-TB lineage2.2.1 None
ERR11043482 Pre-XDR-TB lineage2.2.1 None
ERR133944 MDR-TB lineage2.2.1 ru
ERR230009 MDR-TB lineage2.2.1 ru
ERR228019 MDR-TB lineage2.2.1 ru
ERR403242 MDR-TB lineage2.2.1 None
ERR229931 MDR-TB lineage2.2.1 ru
ERR137281 MDR-TB lineage2.2.1 ru
ERR4830593 MDR-TB lineage2.2.1 tm
ERR067761 Pre-XDR-TB lineage2.2.1 ru
ERR117461 MDR-TB lineage2.2.1 None
SRR6785549 MDR-TB lineage2.2.1 None
ERR067711 MDR-TB lineage2.2.1 ru
ERR144575 MDR-TB lineage2.2.1 ru
ERR8774358 MDR-TB lineage2.2.1 None
ERR2517083 MDR-TB lineage2.2.1 gb
SRR1174328 Pre-XDR-TB lineage2.2.1 None
SRR18715463 MDR-TB lineage2.2.1 None
ERR133957 MDR-TB lineage2.2.1 ru
SRR7654035 MDR-TB lineage2.2.1 None
ERR3132172 MDR-TB lineage2.2.1;lineage4 None
SRR23310854 MDR-TB lineage2.2.1 None
SRR14801647 Pre-XDR-TB lineage2.2.1 None
ERR133953 MDR-TB lineage2.2.1 ru
SRR6257030 MDR-TB lineage2.2.1 ru
ERR108436 MDR-TB lineage2.2.1 ru
ERR228042 MDR-TB lineage2.2.1;lineage4 ru
ERR11081378 MDR-TB lineage2.2.1 None
ERR229916 Pre-XDR-TB lineage2.2.1 ru
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR067662 MDR-TB lineage2.2.1 ru
ERR403299 HR-TB lineage2.2.1;lineage4.2.1.1;lineage4.8 None
ERR227986 Pre-XDR-TB lineage2.2.1;lineage4.2.1 None
ERR2199799 MDR-TB lineage2.2.1 de
SRR6785498 MDR-TB lineage2.2.1 None
ERR137246 MDR-TB lineage2.2.1 ru
ERR4822407 MDR-TB lineage2.2.1 ua
SRR1173552 Pre-XDR-TB lineage2.2.1 None
ERR067581 MDR-TB lineage2.2.1 ru
SRR6785185 Pre-XDR-TB lineage2.2.1 None
ERR5865203 MDR-TB lineage2.2.1 None
ERR234641 Pre-XDR-TB lineage2.2.1 ru
ERR403228 MDR-TB lineage2.2.1 None
ERR11044028 MDR-TB lineage4.1.1.1 None
ERR403305 MDR-TB lineage2.2.1 None
SRR1146417 MDR-TB lineage2.2.1 None
SRR10380063 Pre-XDR-TB lineage2.2.1 None
SRR10397190 MDR-TB lineage2.2.1 None
ERR133886 MDR-TB lineage2.2.1 ru
ERR067576 MDR-TB lineage2.2.1 ru
SRR1173868 Pre-XDR-TB lineage2.2.1 None
ERR067635 Pre-XDR-TB lineage2.2.1 ru
ERR144574 Pre-XDR-TB lineage2.2.1 ru
ERR5865970 Pre-XDR-TB lineage2.2.1 None
ERR11243579 MDR-TB lineage2.2.1 None
ERR4827803 MDR-TB lineage2.2.1 None
SRR13232760 MDR-TB lineage2.2.1 None
ERR067718 Pre-XDR-TB lineage2.2.1 ru
ERR11043378 MDR-TB lineage2.2.1 None
SRR24828598 Pre-XDR-TB lineage2.2.1 None
ERR067654 MDR-TB lineage2.2.1 ru
ERR5864817 Pre-XDR-TB lineage2.2.1 None
SRR5153829 MDR-TB lineage2.2.1 None
ERR067687 MDR-TB lineage2.2.1 ru
ERR5865775 MDR-TB lineage2.2.1 None
SRR14801543 MDR-TB lineage2.2.1 None
ERR067618 Pre-XDR-TB lineage2.2.1 ru
SRR1165557 MDR-TB lineage4.1.1.1 None
ERR5864654 MDR-TB lineage2.2.1 None
SRR24256211 MDR-TB lineage2.2.1 None
ERR108467 MDR-TB lineage2.2.1 ru
ERR158597 MDR-TB lineage2.2.1 ru
SRR14801870 Pre-XDR-TB lineage2.2.1 None
ERR11080965 MDR-TB lineage4.8 None
ERR144549 MDR-TB lineage2.2.1 ru
SAMEA2533511 MDR-TB lineage2.2.1 uz
ERR5865403 MDR-TB lineage2.2.1 None
ERR552194 MDR-TB lineage2.2.1 az
ERR5866462 MDR-TB lineage2.2.1 None
ERR11050145 MDR-TB lineage2.2.1 None
ERR234698 MDR-TB lineage2.2.1 ru
ERR5865402 MDR-TB lineage2.2.1 None
ERR229946 MDR-TB lineage2.2.1 ru
ERR067619 Pre-XDR-TB lineage2.2.1 ru
SRR6485106 MDR-TB lineage2.2.1 None
ERR133930 MDR-TB lineage2.2.1 ru
SRR24710165 Pre-XDR-TB lineage2.2.1 None
ERR5865836 MDR-TB lineage2.2.1 None
ERR108454 MDR-TB lineage2.2.1 ru
ERR144619 MDR-TB lineage2.2.1 ru
SRR6785192 MDR-TB lineage2.2.1 None
ERR5866208 MDR-TB lineage2.2.1 None
ERR019575 MDR-TB lineage2.2.1 ru
ERR4829853 MDR-TB lineage2.2.1 None
ERR403218 MDR-TB lineage2.2.1 None
ERR8774581 Pre-XDR-TB lineage2.2.1 None
ERR108475 MDR-TB lineage2.2.1 ru
SRR3544733 Pre-XDR-TB lineage2.2.1 None
ERR067649 MDR-TB lineage2.2.1 ru
ERR5866541 MDR-TB lineage2.2.1 None
SRR5153078 Pre-XDR-TB lineage2.2.1 None
SRR6832241 Pre-XDR-TB lineage2.2.1 None
ERR5865205 MDR-TB lineage2.2.1 None
ERR158585 Pre-XDR-TB lineage2.2.1 ru
SRR21690725 MDR-TB lineage2.2.1 None
ERR234626 MDR-TB lineage2.2.1;lineage4.2.1.1 None
ERR234565 MDR-TB lineage2.2.1 ru
ERR067653 Pre-XDR-TB lineage2.2.1 ru
ERR027463 Pre-XDR-TB lineage2.2.1 None
ERR117470 MDR-TB lineage2.2.1 ru
SRR5818579 MDR-TB lineage4.1.1.1 dj
ERR234593 MDR-TB lineage2.2.1 ru
ERR4822308 MDR-TB lineage4.1.1.1 de
ERR158590 MDR-TB lineage2.2.1 ru
ERR234596 Pre-XDR-TB lineage2.2.1 ru
ERR234570 MDR-TB lineage2.2.1;lineage4 ru
ERR2516953 MDR-TB lineage2.2.1 gb
ERR067592 Pre-XDR-TB lineage2.2.1 ru
ERR11043209 MDR-TB lineage2.2.1 None
ERR403290 MDR-TB lineage2.2.1 None
ERR8665864 Pre-XDR-TB lineage2.2.1 None
ERR067628 MDR-TB lineage2.2.1 ru
ERR137260 MDR-TB lineage2.2.1 ru
ERR1034673 MDR-TB lineage4.3.3 co