lineage | Count |
---|---|
lineage4.5 | 1 |
lineage6.3;lineage2.2.1 | 1 |
52 | |
lineage2.2.1 | 4 |
lineage4.1.1 | 1 |
lineage2.2 | 1 |
lineage4.9 | 6 |
lineage4 | 3 |
lineage4.1.2.1 | 1 |
La2 | 1 |
La1 | 1 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage2 | 1 |
spoligotype | Count |
---|---|
None | 75 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | ERR234659 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675572 | Other | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4818394 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6044790 | HR-TB | None | SRR7496509 | Other | None | ERR502532 | HR-TB | None | SRR6046540 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7535086 | Other | None | SRR7585435 | Other | lineage4.9 | None | SRR1184294 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | SRR1172951 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1175074 | MDR-TB | None | SRR1196494 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None |
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