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SRA data
Rv3854c
- p.Met1?
Drug resistance types
0 Sensitive
0 RR-TB
28 HR-TB
341 MDR-TB
134 Pre-XDR-TB
4 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2.2.2
313
lineage2.2.1
63
lineage2.2.1.2
58
lineage4.1.2.1
28
lineage2.2.1.1
10
lineage4.1.3
8
lineage3
5
lineage4.2.1
3
lineage2.2.1.2;lineage3
3
lineage4.4.2
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
513
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023318
HR-TB
lineage4.2.2.2
None
ERR1023410
MDR-TB
lineage4.2.2.2
None
ERR1023412
MDR-TB
lineage4.2.2.2
None
ERR1035088
MDR-TB
lineage2.2.1.1
vn
ERR1035155
MDR-TB
lineage4.2.2.2
sa
ERR1082130
Other
lineage6.1.1
gh
ERR1082141
Other
lineage6.1.1
gh
ERR11042995
MDR-TB
lineage4.2.2.2
None
ERR11043787
MDR-TB
lineage4.2.2.2
None
ERR11043936
MDR-TB
lineage4.2.2.2
None
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