ERR7737851
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737919
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737926
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR23340039
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830821
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR3275716
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR1162986
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737858
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737871
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737937
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972355
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6045244
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3014613
|
Pre-XDR-TB
|
lineage4.1.2.1
|
tn
|
SRR10808879
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR1144784
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4800085
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR7737942
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3639737
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1162968
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830785
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR4796965
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR2307650
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260665
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR13290363
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11082434
|
MDR-TB
|
lineage3.1
|
None
|
ERR2446297
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR28393381
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29289147
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4011960
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1162879
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737707
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830828
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR1023318
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR25827318
|
XDR-TB
|
lineage2.2.1.2;lineage3
|
None
|
SAMN02414887
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR4797861
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR13870397
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR25827459
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage3
|
None
|
SRR13870401
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR13290477
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290629
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2517342
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR4797016
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR2516568
|
HR-TB
|
lineage4.1.2.1
|
pe
|
ERR8975137
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR403414
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR1144785
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1162800
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2307763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831240
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR4831239
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516936
|
MDR-TB
|
lineage2.2.1.2
|
gb
|
SRR7069014
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7975628
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7737856
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290578
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737905
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414977
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR4800305
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR7737680
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737836
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28394057
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR21674620
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR5818577
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
SRR1144760
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28351614
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR983240
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3287880
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2513295
|
MDR-TB
|
lineage2.2.1.2
|
gb
|
ERR13290487
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290474
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13289560
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4796881
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR13290581
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830834
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1165372
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1082141
|
Other
|
lineage6.1.1
|
gh
|
ERR4812978
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR4011974
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR6045277
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR4799232
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR4799727
|
MDR-TB
|
lineage2.2.1.2
|
in
|
SRR3082073
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827705
|
MDR-TB
|
lineage2.2.1.1;lineage4.3.3
|
None
|
SRR3724998
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR4828996
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29094054
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737906
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3275847
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR29096320
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044335
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR29093553
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28394029
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737739
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516914
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
SRR29274774
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13266583
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR9125001
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414876
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR3082080
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11067246
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011964
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4797809
|
MDR-TB
|
lineage2.2.1.2
|
in
|
SRR25827613
|
MDR-TB
|
lineage2.2.1.2
|
None
|
ERR11044292
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827558
|
XDR-TB
|
lineage2.2.1.1;lineage2.2.1.2;lineage3
|
None
|
ERR4830838
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR13260937
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR7737656
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163201
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6397171
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290475
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290627
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6397154
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR13355777
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR270707
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR4830829
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR4796765
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR4798468
|
MDR-TB
|
lineage2.2.1.2
|
in
|
SRR23340019
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR14802103
|
Other
|
lineage4.3.3
|
None
|
SRR6045537
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR23340110
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163128
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29093679
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290328
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR2100878
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR7737864
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972289
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11042995
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR998830
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4830782
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR13276188
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR6045085
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
SRR7070182
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR1146309
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1146289
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163085
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827692
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4798141
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR7737842
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4828993
|
MDR-TB
|
lineage4.2.2.2
|
it
|
SRR11972363
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4799809
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR7732707
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR16370549
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4796348
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR13289987
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11972359
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831457
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1163179
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2145520
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2307715
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4831209
|
HR-TB
|
lineage4.2.2.2
|
de
|
ERR4798239
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR7975641
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR998829
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11044333
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1167131
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR13870371
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR13870375
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4553427
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR7737756
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2307655
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1163123
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044613
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4813151
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737840
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR6045841
|
HR-TB
|
lineage4.2.2.2
|
gb
|
ERR3275727
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR4011969
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1162796
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4798003
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
SRR2469380
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR4831241
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR3287438
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
ERR11069128
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1146320
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737662
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737675
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR998850
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516906
|
MDR-TB
|
lineage2.2.1.2
|
gb
|
ERR11080856
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR270720
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR278538
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13266957
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4828843
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737682
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011973
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4797322
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR3287345
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
SRR1146301
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4798352
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR3275385
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR23340157
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR11050152
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR7911324
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
SRR1144814
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290362
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290488
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13261596
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13266530
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR13276239
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4799343
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR1144833
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR6397199
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13276180
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13266829
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR25827739
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR16058171
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011962
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972412
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2184625
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR21690946
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290327
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13260204
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7737896
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737777
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28044339
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR28045101
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR5065371
|
Pre-XDR-TB
|
lineage2.2.2
|
vn
|
ERR12796617
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28393827
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6045932
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290579
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290580
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290626
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13291052
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR29772820
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4830840
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR2446468
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR11043787
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28046349
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR13284147
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13290365
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4796745
|
MDR-TB
|
lineage2.2.1.2
|
in
|
SRR1049976
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11044007
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3287447
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
SRR1163208
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11049567
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11082240
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR23340042
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11081528
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827762
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage3
|
None
|
ERR4830789
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR13290329
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830794
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR11972279
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11972292
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29385366
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29126587
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR21689464
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827806
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR28046353
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4830798
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR4796978
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4822303
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR4828989
|
MDR-TB
|
lineage4.2.2.2
|
it
|
SRR28868445
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR29274734
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28393773
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1200620
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR25827480
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR11044024
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR10040357
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1023410
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290325
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR114495
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR11080920
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737645
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2514267
|
MDR-TB
|
lineage2.2.1.2
|
None
|
ERR11081050
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR3085334
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4829102
|
Pre-XDR-TB
|
lineage4.2.2.2
|
dj
|
ERR4011965
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516772
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR4822497
|
MDR-TB
|
lineage4.2.2.2
|
de
|
SRR5818638
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
ERR7737685
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4829004
|
MDR-TB
|
lineage4.2.2.2
|
it
|
ERR7737819
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972256
|
Other
|
lineage2.2.1
|
None
|
SRR29385354
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR18213722
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR4830825
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR7781506
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4796977
|
MDR-TB
|
lineage2.2.1.2
|
in
|
SRR28046064
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4798219
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
SRR29093289
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13285025
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414930
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR6397213
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3275476
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR270713
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR7737644
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830787
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830792
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR5818581
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
ERR11044060
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11082116
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737868
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011954
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830809
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR4812845
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4830784
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR7737772
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2514123
|
MDR-TB
|
lineage2.2.1.2
|
gb
|
SRR23340165
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4796735
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
SRR22424877
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR25827482
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR6046574
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830796
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290628
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29093272
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13276437
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29093311
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011968
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4812987
|
Pre-XDR-TB
|
lineage4.1.2.1
|
pe
|
SAMN02414874
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR25827524
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage4
|
None
|
SRR11972309
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1082130
|
Other
|
lineage6.1.1
|
gh
|
ERR4800628
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR3142013
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1167061
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13289703
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR28860057
|
Other
|
lineage2.2.1
|
None
|
SRR1165432
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4276911
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972402
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737722
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1144808
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1144758
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1035155
|
MDR-TB
|
lineage4.2.2.2
|
sa
|
ERR233350
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR22251828
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737647
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163093
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414873
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR11972446
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2517069
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
ERR11043936
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR270778
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR1163014
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11069046
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR4831448
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4830839
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR751467
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR1023412
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044055
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2512596
|
MDR-TB
|
lineage2.2.1.2
|
gb
|
ERR11081695
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR983236
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737817
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4798430
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR4276870
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163142
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011963
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3287512
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR13284437
|
MDR-TB
|
lineage4.4.2
|
None
|
ERR4011951
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13284999
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830824
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR7737670
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR867533
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7069638
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5341252
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR13290489
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR386897
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393368
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR3324346
|
MDR-TB
|
lineage4.1.4
|
None
|
ERR13285002
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4813619
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4830820
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR7737847
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4797994
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage4.1.1.3
|
in
|
ERR7737947
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1146330
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163413
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29093297
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13261072
|
MDR-TB
|
lineage2.2.1.2
|
None
|
ERR4799487
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
SAMN02414962
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR28044451
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1166876
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13266903
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR13289719
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13289578
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR998851
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13260957
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR29440886
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR7737745
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29539344
|
Other
|
lineage4.8
|
None
|
ERR266608
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR4800482
|
MDR-TB
|
lineage2.2.1.2
|
None
|
SRR3085331
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290326
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2307364
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4830826
|
HR-TB
|
lineage4.2.2.2;lineage4.8
|
et
|
ERR4831449
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR7737720
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737776
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR11972288
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22251454
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR25827718
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage3
|
None
|
SRR5817463
|
MDR-TB
|
lineage2.2.1
|
au
|
SRR28868620
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR11069129
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1035088
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
ERR4011953
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR2100823
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR2100925
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25827870
|
XDR-TB
|
lineage2.2.1.2
|
None
|
ERR4830831
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
ERR6397151
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SAMN02414896
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR1146293
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290324
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516944
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
ERR13276333
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR5818595
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
ERR11044157
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR21690975
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4797850
|
Pre-XDR-TB
|
lineage2.2.1.2
|
in
|
ERR2516962
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
SRR25827422
|
Pre-XDR-TB
|
lineage1.1.2;lineage2.2.1.2
|
None
|
ERR2677447
|
MDR-TB
|
lineage4.2.2.2
|
de
|
ERR13276281
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4828871
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290322
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11044337
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR1166925
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4831178
|
HR-TB
|
lineage4.2.2.2
|
de
|
ERR4828868
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1162874
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4830813
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR2100342
|
HR-TB
|
lineage4.2.2.2
|
None
|
ERR7732708
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR998849
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11081192
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11972354
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830797
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR4830793
|
MDR-TB
|
lineage4.2.2.2
|
et
|
ERR7737641
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR12117937
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4798170
|
MDR-TB
|
lineage2.2.1.2
|
in
|
ERR13290323
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011952
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4799739
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR2517379
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR998852
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11081701
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737806
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737882
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737890
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13290476
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2516806
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR7737727
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4011966
|
Pre-XDR-TB
|
lineage4.2.2.2
|
None
|
SRR2100830
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11972407
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046111
|
HR-TB
|
lineage4.2.2.2
|
gb
|
SRR6045763
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3639818
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR7737855
|
MDR-TB
|
lineage4.2.2.2
|
None
|