Rv3862c - c.-325T>G
Drug resistance types
146 Sensitive
6 RR-TB
28 HR-TB
32 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 186 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 2 |
| lineage3.1.1;lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage3.1.1;lineage4 | 4 |
| lineage1.1.2;lineage3.1.1 | 4 |
| lineage2.2.1;lineage3.1.1 | 1 |
| lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage3.1;lineage4.9.1 | 1 |
| lineage3.1.1;lineage4.3.3 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4 | 1 |
| lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.3.4 | 1 |
| lineage3.1.1;lineage4.3.4.2.1 | 2 |
| lineage3.1.1;lineage4.2.2.2 | 4 |
| lineage3.1.1;lineage4.1.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 | 1 |
| lineage1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212017 | HR-TB | lineage3.1.1 | mw | ERR212042 | HR-TB | lineage3.1.1 | None | SRR12882622 | Sensitive | lineage3.1.1 | None | SRR12882128 | Sensitive | lineage3.1.1 | None | ERR3077936 | Sensitive | lineage3.1.1 | None | SRR3724822 | Sensitive | lineage3.1.1 | None | SRR19428594 | Sensitive | lineage3.1.1 | None | ERR405218 | Sensitive | lineage3.1.1 | None | ERR11775869 | Sensitive | lineage3.1.1 | None | ERR5979472 | Sensitive | lineage3.1.1 | None | ERR245789 | Sensitive | lineage3.1.1 | mw | ERR779659 | Sensitive | lineage3.1.1 | None | SRR12882364 | Sensitive | lineage3.1.1 | None | SRR12882417 | Sensitive | lineage3.1.1 | None | ERR3077976 | Sensitive | lineage3.1.1 | None | ERR190372 | Sensitive | lineage3.1.1 | mw | ERR1063892 | HR-TB | lineage3.1.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR182044 | Sensitive | lineage3.1.1 | mw | ERR11488795 | RR-TB | lineage3.1.1 | None | SRR19428529 | MDR-TB | lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | None | ERR736861 | Sensitive | lineage3.1.1 | None | SRR12882618 | HR-TB | lineage3.1.1 | None | SRR19428526 | Sensitive | lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | ERR3077992 | MDR-TB | lineage3.1.1 | None | SRR12882415 | Sensitive | lineage3.1.1 | None | ERR3077970 | MDR-TB | lineage3.1.1 | None | ERR181782 | HR-TB | lineage3.1.1;lineage4.1.1.3 | mw | ERR11488800 | MDR-TB | lineage3.1.1 | None | ERR245832 | HR-TB | lineage3.1.1 | mw | SRR12882625 | HR-TB | lineage3.1.1 | None | ERR736815 | Sensitive | lineage3.1.1 | None | SRR12882409 | Sensitive | lineage3.1.1 | None | ERR11775844 | Sensitive | lineage3.1.1 | None | ERR11775777 | Other | lineage3.1.1 | None | ERR181763 | HR-TB | lineage3.1.1 | mw | ERR11465136 | Sensitive | lineage3.1.1 | None | ERR161079 | Sensitive | lineage3.1.1 | mw | ERR11465927 | Sensitive | lineage3.1.1 | None | ERR11775905 | Sensitive | lineage3.1.1 | None | ERR11775897 | Sensitive | lineage3.1.1 | None | SRR19428563 | Other | lineage2.2.1;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | None | ERR3078017 | MDR-TB | lineage3.1.1 | None | SRR12882322 | Sensitive | lineage3.1.1 | None | ERR11775840 | Sensitive | lineage3.1.1 | None | ERR212058 | HR-TB | lineage3.1.1;lineage4 | mw | ERR4596915 | RR-TB | lineage3.1.1 | None | ERR4596934 | MDR-TB | lineage1.1.2;lineage3.1.1 | None | ERR773786 | Sensitive | lineage3.1.1 | None | ERR12268421 | Sensitive | lineage3.1.1 | None | ERR2245398 | Sensitive | lineage3.1.1 | no | SRR19428558 | Sensitive | lineage2.2.1;lineage3.1.1 | None | ERR3077939 | MDR-TB | lineage3.1.1 | None | ERR3077984 | Sensitive | lineage3.1.1 | None | ERR736877 | HR-TB | lineage3.1.1 | None | SRR12882010 | Sensitive | lineage3.1.1 | None | SRR12882346 | Sensitive | lineage3.1.1 | None | SRR12882670 | Sensitive | lineage3.1.1 | None | ERR245684 | Sensitive | lineage3.1.1 | mw | SRR19428523 | HR-TB | lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | None | ERR181692 | HR-TB | lineage3.1.1 | mw | ERR212007 | Sensitive | lineage3.1.1 | mw | ERR124645 | Sensitive | lineage3.1.1 | mw | ERR3077955 | MDR-TB | lineage3.1.1 | None | ERR245792 | HR-TB | lineage3.1.1 | mw | ERR3077956 | MDR-TB | lineage3.1.1 | None | SRR12882335 | Sensitive | lineage3.1.1 | None | ERR3275877 | Sensitive | lineage3.1.1 | nl | ERR11488719 | MDR-TB | lineage3.1.1 | None | ERR124646 | Sensitive | lineage3.1.1 | mw | ERR245803 | Sensitive | lineage3.1.1 | mw | ERR245805 | HR-TB | lineage3.1.1 | mw | ERR190340 | Sensitive | lineage3.1;lineage4.9.1 | None | SRR19428616 | Sensitive | lineage1.1.2;lineage3.1.1 | None | SRR19428637 | Sensitive | lineage3.1.1;lineage4.3.3 | None | SRR19428617 | Sensitive | lineage3.1.1;lineage4.3.3 | None | SRR12882281 | Sensitive | lineage3.1.1 | None | ERR3078016 | MDR-TB | lineage3.1.1 | None | SRR3724743 | Sensitive | lineage3.1.1 | None | SRR12882287 | Sensitive | lineage3.1.1 | None | SRR19428550 | Sensitive | lineage3.1.1 | None | SRR12882665 | Sensitive | lineage3.1.1 | None | SRR19392723 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | None | SRR19409781 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4 | None | SRR19428535 | MDR-TB | lineage3.1.1 | None | SRR29096637 | Sensitive | lineage3.1.1 | None | ERR3077966 | MDR-TB | lineage3.1.1 | None | ERR3077987 | HR-TB | lineage3.1.1 | None | SRR12882617 | Sensitive | lineage3.1.1 | None | SRR12882717 | Sensitive | lineage3.1.1 | None | SRR19428532 | Other | lineage3.1.1;lineage4 | None | ERR323097 | HR-TB | lineage3.1.1 | None | SRR19428630 | HR-TB | lineage3.1.1 | None | SRR12882489 | Sensitive | lineage3.1.1 | None | SRR12882016 | Sensitive | lineage3.1.1 | None | ERR212029 | Sensitive | lineage3.1.1 | mw | ERR11465271 | Sensitive | lineage3.1.1 | None | SRR12882375 | Sensitive | lineage3.1.1 | None | SRR12882424 | Sensitive | lineage3.1.1 | None | ERR5979446 | Sensitive | lineage3.1.1 | None | ERR11775870 | Sensitive | lineage3.1.1 | None | ERR11465483 | Sensitive | lineage3.1.1 | None | ERR11775864 | Other | lineage3.1.1 | None | ERR11775816 | Sensitive | lineage3.1.1 | None | ERR11775810 | Sensitive | lineage3.1.1 | None | SRR19392954 | Other | lineage2.2.1;lineage3.1.1;lineage4 | None | SRR19428603 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.3.4 | None | SRR29096235 | Sensitive | lineage3.1.1 | None | ERR181693 | Sensitive | lineage3.1.1 | mw | ERR190347 | HR-TB | lineage3.1.1 | mw | SRR19428592 | Sensitive | lineage3.1.1 | None | SRR12882340 | Sensitive | lineage3.1.1 | None | SRR12882351 | Sensitive | lineage3.1.1 | None | SRR12882497 | Sensitive | lineage3.1.1 | None | SRR12882568 | Sensitive | lineage3.1.1 | None | ERR181715 | Sensitive | lineage3.1.1 | mw | SRR12882020 | Other | lineage3.1.1 | None | ERR5979412 | Sensitive | lineage3.1.1 | None | ERR4596935 | MDR-TB | lineage3.1.1 | None | SRR12882425 | Sensitive | lineage3.1.1 | None | ERR3077949 | Sensitive | lineage3.1.1 | None | SRR12882008 | Sensitive | lineage3.1.1 | None | SRR12882491 | Sensitive | lineage3.1.1 | None | SRR19428519 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | None | SRR12882632 | Sensitive | lineage3.1.1 | None | SRR12882354 | Sensitive | lineage3.1.1 | None | ERR212170 | Sensitive | lineage3.1.1 | mw | ERR181851 | Sensitive | lineage3.1.1 | mw | ERR212002 | Sensitive | lineage3.1.1;lineage4.3.4.2.1 | mw | ERR212147 | Sensitive | lineage3.1.1 | mw | ERR11775832 | Sensitive | lineage3.1.1 | None | SRR19417260 | Sensitive | lineage3.1.1;lineage4.2.2.2 | None | ERR176471 | Sensitive | lineage3.1.1 | mw | SRR19409785 | Sensitive | lineage3.1.1;lineage4 | None | SRR12882378 | Sensitive | lineage3.1.1 | None | SRR12882344 | Sensitive | lineage3.1.1 | None | SRR19428518 | Sensitive | lineage3.1.1;lineage4 | None | SRR19428541 | RR-TB | lineage3.1.1 | None | ERR4596899 | MDR-TB | lineage3.1.1 | None | SRR19428615 | Sensitive | lineage3.1.1 | None | ERR5979468 | Sensitive | lineage3.1.1 | None | SRR19428632 | Sensitive | lineage3.1.1 | None | ERR036210 | Sensitive | lineage3.1.1 | mw | ERR181815 | HR-TB | lineage3.1.1 | mw | SRR12882372 | Sensitive | lineage3.1.1 | None | ERR3077952 | Sensitive | lineage3.1.1 | None | ERR4596895 | MDR-TB | lineage3.1.1 | None | ERR4596909 | MDR-TB | lineage3.1.1 | None | SRR21690985 | Sensitive | lineage3.1.1 | None | SRR19428618 | Sensitive | lineage1.1.2;lineage3.1.1 | None | ERR181713 | Sensitive | lineage3.1.1 | mw | ERR3077998 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | ERR11488799 | MDR-TB | lineage3.1.1 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR12882352 | Sensitive | lineage3.1.1 | None | SRR19428614 | Other | lineage3.1.1 | None | ERR5979421 | Sensitive | lineage3.1.1 | None | SRR12882583 | Sensitive | lineage3.1.1 | None | ERR1063851 | HR-TB | lineage3.1.1 | None | SRR19414522 | Sensitive | lineage3.1.1;lineage4.1.2.1 | None | ERR3077930 | MDR-TB | lineage3.1.1 | None | ERR3077948 | MDR-TB | lineage1.1.2;lineage3.1.1 | None | ERR11488705 | RR-TB | lineage3.1.1 | None | ERR245757 | HR-TB | lineage3.1.1 | mw | SRR12882329 | Sensitive | lineage3.1.1 | None | SRR12882338 | HR-TB | lineage3.1.1 | None | SRR12882293 | Sensitive | lineage3.1.1 | None | SRR12882341 | Sensitive | lineage3.1.1 | None | ERR4596903 | MDR-TB | lineage3.1.1 | None | SRR19392724 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | SRR19415531 | Sensitive | lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | None | ERR11775836 | Sensitive | lineage3.1.1 | None | ERR736838 | Sensitive | lineage3.1.1 | None | SRR12882488 | Sensitive | lineage3.1.1 | None | SRR12882021 | Sensitive | lineage3.1.1 | None | ERR3077950 | MDR-TB | lineage3.1.1 | None | ERR221587 | Sensitive | lineage3.1.1 | mw | SRR19428493 | RR-TB | lineage3.1.1 | None | ERR4596930 | MDR-TB | lineage3.1.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR736823 | Sensitive | lineage3.1.1 | None | SRR12882125 | Sensitive | lineage3.1.1 | None | SRR19428585 | Sensitive | lineage1.1.2;lineage3.1.1;lineage4.3;lineage4.6.1.1 | None | ERR212146 | HR-TB | lineage3.1.1 | mw | ERR11466584 | Sensitive | lineage3.1.1 | None | ERR3077994 | MDR-TB | lineage3.1.1 | None | SRR12882581 | Sensitive | lineage3.1.1 | None | SRR12882738 | Sensitive | lineage3.1.1 | None | SRR12882134 | Sensitive | lineage3.1.1 | None | SRR12882741 | Sensitive | lineage3.1.1 | None | ERR11775890 | Sensitive | lineage3.1.1;lineage4.2.2.2 | None | ERR11775843 | Other | lineage3.1.1 | None | ERR11775781 | Sensitive | lineage3.1.1 | None | ERR11775855 | Sensitive | lineage3.1.1 | None | SRR12882739 | Sensitive | lineage3.1.1 | None | ERR245838 | HR-TB | lineage3.1.1 | mw | SRR19428540 | Sensitive | lineage1;lineage3.1.1;lineage4.2.2.2 | None | SRR12882736 | Sensitive | lineage3.1.1 | None | ERR11466118 | Sensitive | lineage3.1.1 | None | SRR19415697 | Other | lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | SRR19428598 | Sensitive | lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | None | ERR245715 | Sensitive | lineage3.1.1 | mw | ERR181852 | RR-TB | lineage3.1.1 | mw | ERR181863 | Sensitive | lineage3.1.1 | mw | ERR4809128 | Sensitive | lineage3.1.1 | za | ERR181808 | HR-TB | lineage3.1.1 | mw | ERR11465377 | Sensitive | lineage3.1.1 | None | SRR12882716 | Sensitive | lineage3.1.1 | None | SRR19428608 | Other | lineage3.1.1;lineage4.3.4.2.1 | None | ERR11050512 | Sensitive | lineage3.1.1 | None | ERR4596907 | MDR-TB | lineage3.1.1 | None | ERR126620 | HR-TB | lineage3.1.1 | mw | ERR161167 | Sensitive | lineage3.1.1 | mw | SRR12882140 | Sensitive | lineage3.1.1 | None | SRR12882345 | HR-TB | lineage3.1.1 | None | ERR3077965 | MDR-TB | lineage3.1.1 | None | SRR19428504 | MDR-TB | lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | None | ERR3077963 | MDR-TB | lineage3.1.1;lineage4.2.2.2 | None | SRR29096920 | Sensitive | lineage3.1.1 | None | ERR5979449 | Sensitive | lineage3.1.1 | None | ERR4830883 | MDR-TB | lineage3.1.1 | None | ERR3077964 | MDR-TB | lineage3.1.1 | None |
|---|
