Rv3919c - p.Ala134Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
6 HR-TB
52 MDR-TB
64 Pre-XDR-TB
19 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 131 |
| lineage1.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage1.2.1.2.1 | 3 |
| lineage3 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 3 |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.2;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02585961 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR4818261 | Other | lineage1.1.2 | None | ERR11488381 | MDR-TB | lineage4.4.1.1 | None | ERR10748163 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29464856 | Other | lineage4.1.2.1 | None | ERR13289265 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289347 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289321 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1180181 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286118 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR270641 | Other | lineage1.2.1.2.1 | None | ERR13289396 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289058 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289282 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1181279 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3132169 | HR-TB | lineage4.1.2.1 | None | ERR7737696 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR5314269 | MDR-TB | lineage1.1.2 | None | ERR9992692 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11773741 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR7737652 | MDR-TB | lineage4.1.2.1 | None | ERR9806894 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR123909 | Other | lineage3 | None | ERR4831595 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR2101482 | MDR-TB | lineage4.1.2.1 | None | SRR28868404 | Other | lineage3 | None | ERR9806812 | MDR-TB | lineage4.1.2.1 | None | SRR9971236 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6982216 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR832981 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1063895 | MDR-TB | lineage4.1.2.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR9993017 | XDR-TB | lineage4.1.2.1 | None | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | ERR11488567 | MDR-TB | lineage4.1.2.1 | None | SRR10315629 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR29056348 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR6358870 | RR-TB | lineage4.6.1.1 | None | SRR833038 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3132289 | RR-TB | lineage4.9 | None | ERR1213837 | RR-TB | lineage4.9 | kr | SRR4034387 | MDR-TB | lineage4.1.2.1 | za | SRR10315628 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9992645 | XDR-TB | lineage4.1.2.1 | None | SRR1180276 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8976096 | MDR-TB | lineage4.1.2.1 | None | SRR9971281 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR2100151 | Other | lineage3 | None | SRR2101574 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMN02053753 | MDR-TB | lineage4.1.2.1 | za | ERR2514704 | Other | lineage1.2.1.2.1 | gb | ERR2515982 | MDR-TB | lineage4.1.2.1 | za | ERR2515542 | MDR-TB | lineage4.1.2.1 | za | ERR2515583 | MDR-TB | lineage4.1.2.1 | za | SAMN02053783 | MDR-TB | lineage4.1.2.1 | za | SRR21732547 | MDR-TB | lineage4.1.2.1 | None | SAMN02585972 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR9993049 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289025 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR13289276 | XDR-TB | lineage4.1.2.1 | None | ERR13289284 | MDR-TB | lineage4.1.2.1 | None | ERR9992670 | XDR-TB | lineage4.1.2.1 | None | ERR13286038 | XDR-TB | lineage4.1.2.1 | None | ERR9992693 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993148 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9992701 | XDR-TB | lineage4.1.2.1 | None | ERR9992702 | XDR-TB | lineage4.1.2.1 | None | ERR8975760 | XDR-TB | lineage4.1.2.1 | None | ERR9992678 | XDR-TB | lineage4.1.2.1 | None | ERR2515255 | Pre-XDR-TB | lineage2.2.1;lineage4.1 | za | ERR2515264 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515361 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515199 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515739 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516091 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR10315617 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR5918116 | XDR-TB | lineage4.1.2.1 | za | SRR9971183 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806800 | MDR-TB | lineage4.1.2.1 | None | SRR29055908 | MDR-TB | lineage4.1.2.1 | None | SRR1180419 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9992674 | XDR-TB | lineage4.1.2.1 | None | ERR9993086 | XDR-TB | lineage4.1.2.1 | None | ERR10748222 | MDR-TB | lineage4.1.2.1 | None | ERR10610164 | MDR-TB | lineage4.1.2.1 | None | ERR4817940 | HR-TB | lineage1.2.1.2 | None | SRR6896197 | MDR-TB | lineage4.1.2.1 | None | ERR11775345 | MDR-TB | lineage4.1.2.1 | None | SRR9971367 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288870 | MDR-TB | lineage2.2.2;lineage4.1.2.1 | None | SRR9971345 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488403 | MDR-TB | lineage4.1.2.1 | None | ERR11488651 | MDR-TB | lineage4.1.2.1 | None | ERR8025355 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | SRR2101360 | MDR-TB | lineage4.1.2.1 | None | SRR29056355 | MDR-TB | lineage4.1.2.1 | None | ERR13288945 | XDR-TB | lineage4.1.2.1 | None | ERR5987408 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488762 | MDR-TB | lineage4.1.2.1 | None | SRR6896525 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR10610314 | MDR-TB | lineage4.1.2.1 | None | SRR4034389 | MDR-TB | lineage4.1.2.1 | za | ERR9992907 | XDR-TB | lineage4.1.2.1 | None | SRR4034386 | MDR-TB | lineage4.1.2.1 | za | ERR7737700 | MDR-TB | lineage4.1.2.1 | None | ERR11773716 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4809252 | MDR-TB | lineage4.1.2.1 | za | SRR833131 | MDR-TB | lineage4.1.2.1 | None | ERR8975696 | XDR-TB | lineage4.1.2.1 | None | SRR10315618 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4814607 | HR-TB | lineage3 | gb | ERR2516017 | MDR-TB | lineage4.1.2.1 | za | ERR2515588 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515667 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516023 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515135 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516045 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR553053 | MDR-TB | lineage4.1.2.1 | sz | ERR10610161 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1181284 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9992854 | XDR-TB | lineage4.1.2.1 | None | SRR3105750 | MDR-TB | lineage1.2.2.2 | None | ERR13289376 | MDR-TB | lineage4.1.2.1 | None | ERR13286066 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13286133 | MDR-TB | lineage4.1.2.1 | None | SRR833032 | MDR-TB | lineage4.1.2.1 | None | SRR9971071 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR9806949 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR28868419 | Other | lineage3 | None | SRR6207282 | MDR-TB | lineage4.1.2.1 | None | SRR6896411 | MDR-TB | lineage4.1.2.1 | None | SRR6896523 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1183124 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288920 | XDR-TB | lineage4.1.2.1 | None | SRR29055668 | MDR-TB | lineage4.1.2.1 | None | SRR833075 | MDR-TB | lineage4.1.2.1 | None | SRR1181171 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13276035 | HR-TB | lineage2.2.1;lineage4.8 | None | ERR1213920 | HR-TB | lineage4.1.2.1 | None | SRR1181092 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10748250 | XDR-TB | lineage4.1.2.1 | None | ERR9806802 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR833128 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR26331632 | MDR-TB | lineage4.1.2.1 | None | SRR17657935 | RR-TB | lineage4.9 | None | SRR4034388 | MDR-TB | lineage4.1.2.1 | za | SRR4034390 | MDR-TB | lineage4.1.2.1 | za | SRR8217891 | Other | lineage1.1.1.1 | None | ERR7911682 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR2099945 | Other | lineage1.2.1.2.1 | None | ERR2514156 | HR-TB | lineage4.4.1.2 | gb | ERR553216 | MDR-TB | lineage4.1.2.1 | sz | SRR833194 | MDR-TB | lineage4.1.2.1 | None |
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