lineage | Count |
---|---|
lineage4.8 | 75 |
lineage4.2.2 | 3 |
lineage1.1.2 | 4 |
lineage3 | 21 |
lineage4.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.2.1 | 37 |
lineage4.4.2 | 1 |
lineage4.4.1;lineage4.1.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage2.2.1 | 2 |
lineage4.1.2 | 1 |
lineage4.9.1 | 1 |
lineage3.1.2 | 2 |
lineage4.1.1.3 | 2 |
lineage4.3.4.1 | 1 |
lineage1.1.1 | 1 |
lineage4.3.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.1.1.3;lineage3 | 1 |
lineage4.9 | 1 |
lineage4.5 | 2 |
lineage3.1.1 | 1 |
lineage4.3.4.2.1 | 2 |
spoligotype | Count |
---|---|
None | 165 |
ID | Drug resistance | Lineage | Country iso2 | ERR4195569 | Pre-XDR-TB | lineage4.8 | None | ERR4276875 | MDR-TB | lineage4.8 | None | ERR4276876 | MDR-TB | lineage4.8 | None | ERR4796795 | Pre-XDR-TB | lineage4.2.2 | in | ERR4423744 | MDR-TB | lineage1.1.2 | None | ERR4798290 | Pre-XDR-TB | lineage3 | in | ERR4797587 | Pre-XDR-TB | lineage4.2 | in | ERR4798946 | MDR-TB | lineage1.1.2 | in | ERR4798567 | Other | lineage1.2.2.2 | in | ERR4798672 | HR-TB | lineage1.1.2 | in | ERR4812033 | Other | lineage4.1.2.1 | pe | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR4811767 | Other | lineage4.1.2.1 | pe | ERR4811936 | Other | lineage4.1.2.1 | pe | ERR4812369 | Other | lineage4.1.2.1 | None | ERR4812208 | Other | lineage4.1.2.1 | pe | ERR4812057 | Other | lineage4.1.2.1 | None | ERR4812453 | Other | lineage4.4.1;lineage4.1.2.1 | pe | ERR4812459 | Other | lineage4.1.2.1 | pe | ERR4812410 | Other | lineage4.1.2.1 | pe | ERR4812449 | Other | lineage4.1.2.1 | pe | ERR4812538 | Other | lineage4.1.2.1 | pe | ERR4812680 | Other | lineage4.1.2.1 | None | ERR4812618 | Other | lineage4.1.2.1 | None | ERR4812555 | Other | lineage4.1.2.1 | pe | ERR4812644 | Other | lineage4.1.2.1 | None | ERR4815693 | Other | lineage4.1.2.1 | gb | SRR7341638 | MDR-TB | lineage4.8 | ro | SRR4033481 | Other | lineage4.3.2.1 | None | SRR7341670 | MDR-TB | lineage4.8 | ro | ERR551456 | MDR-TB | lineage4.1.1.1 | sz | SRR7341656 | MDR-TB | lineage4.8 | ro | SRR6824288 | MDR-TB | lineage2.2.1 | cn | ERR2184631 | Other | lineage4.1.2.1 | None | ERR2200091 | Other | lineage4.1.2 | de | ERR4813227 | Other | lineage4.1.2.1 | pe | SRR6153116 | Other | lineage4.9.1 | ca | SRR7341688 | MDR-TB | lineage4.8 | ro | SRR1166171 | MDR-TB | lineage4.8 | ro | ERR3276021 | Other | lineage3 | nl | SRR5341454 | Other | lineage3.1.2 | None | ERR4813256 | Other | lineage4.1.2.1 | pe | SRR1166190 | Pre-XDR-TB | lineage4.8 | ro | SRR7341697 | MDR-TB | lineage4.8 | ro | ERR2179853 | Other | lineage3 | None | SRR7341679 | MDR-TB | lineage4.8 | ro | ERR8975805 | MDR-TB | lineage4.1.1.3 | None | SRR7341687 | Pre-XDR-TB | lineage4.8 | ro | ERR2510657 | MDR-TB | lineage4.8 | it | ERR2510609 | RR-TB | lineage3 | pk | ERR4817721 | MDR-TB | lineage4.8 | gb | ERR2510685 | MDR-TB | lineage4.8 | it | ERR2512595 | HR-TB | lineage1.1.2 | gb | ERR2510706 | MDR-TB | lineage4.8 | it | ERR2510799 | Other | lineage4.1.2.1 | it | ERR2510832 | MDR-TB | lineage4.8 | it | ERR4819070 | MDR-TB | lineage4.8 | gb | ERR2432992 | HR-TB | lineage4.3.4.1 | br | ERR2510689 | MDR-TB | lineage4.8 | it | SRR7341645 | MDR-TB | lineage4.8 | ro | SRR7341662 | MDR-TB | lineage4.8 | ro | SRR1723644 | MDR-TB | lineage2.2.1 | cn | SAMN03647532 | HR-TB | lineage3 | None | SRR1166121 | MDR-TB | lineage4.8 | ro | ERR4819606 | Other | lineage1.1.1 | gb | ERR1193645 | HR-TB | lineage4.3.1 | vn | ERR4820346 | HR-TB | lineage3 | gb | SRR1166094 | Pre-XDR-TB | lineage4.8 | ro | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR7341677 | MDR-TB | lineage4.8 | ro | SRR1166321 | Pre-XDR-TB | lineage4.8 | ro | SRR7341642 | MDR-TB | lineage4.8 | ro | SRR5341398 | Pre-XDR-TB | lineage4.1.1.3;lineage3 | in | SRR6045240 | Other | lineage3 | gb | ERR2516136 | Pre-XDR-TB | lineage4.8 | es | ERR552839 | Other | lineage4.1.2.1 | de | ERR2517008 | Pre-XDR-TB | lineage4.8 | gb | SRR6824695 | MDR-TB | lineage4.2.2 | cn | ERR4821528 | Other | lineage3 | gb | SAMN02599011 | Other | lineage3 | in | SRR23086707 | Pre-XDR-TB | lineage4.8 | None | ERR4820849 | Other | lineage3 | gb | ERR3275961 | Other | lineage4.9 | nl | ERR4821809 | Other | lineage4.1.2.1 | gb | SRR5341397 | Other | lineage3.1.2 | in | ERR2653000 | Other | lineage4.1.2.1 | None | SRR16088148 | Other | lineage4.8 | None | SRR23086708 | Pre-XDR-TB | lineage4.8 | None | SRR23086709 | Pre-XDR-TB | lineage4.8 | None | SRR23086717 | Pre-XDR-TB | lineage4.8 | None | ERR4827838 | Other | lineage4.5 | None | ERR4822340 | Pre-XDR-TB | lineage4.8 | de | ERR6866178 | Other | lineage4.1.2.1 | None | SRR1169483 | Other | lineage3 | None | SRR13180265 | HR-TB | lineage4.8 | None | SRR5486906 | Pre-XDR-TB | lineage4.8 | None | SRR14519997 | HR-TB | lineage3 | None | SRR3082124 | MDR-TB | lineage4.8 | None | SRR7131227 | Other | lineage4.1.2.1 | None | ERR4829926 | Pre-XDR-TB | lineage4.8 | it | SRR7341665 | MDR-TB | lineage4.8 | ro | SRR23086704 | Pre-XDR-TB | lineage4.8 | None | ERR4829880 | Pre-XDR-TB | lineage4.8 | it | ERR4829937 | Pre-XDR-TB | lineage3 | pk | ERR4829371 | Pre-XDR-TB | lineage4.8 | it | ERR4829109 | MDR-TB | lineage4.8 | it | ERR4829107 | Pre-XDR-TB | lineage4.8 | None | ERR4829648 | Pre-XDR-TB | lineage4.8 | None | ERR4829396 | Pre-XDR-TB | lineage4.8 | None | ERR4829412 | Pre-XDR-TB | lineage4.8 | it | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4829568 | Pre-XDR-TB | lineage4.8 | it | ERR4829602 | Pre-XDR-TB | lineage4.8 | it | ERR4829621 | Pre-XDR-TB | lineage4.8 | None | ERR4828870 | Pre-XDR-TB | lineage4.8 | None | ERR4828864 | MDR-TB | lineage4.8 | None | ERR4829789 | Pre-XDR-TB | lineage4.8 | it | ERR4828910 | MDR-TB | lineage4.8 | None | ERR4829834 | MDR-TB | lineage4.8 | None | ERR4829795 | MDR-TB | lineage4.8 | None | ERR4829791 | Pre-XDR-TB | lineage4.8 | None | SAMN02414911 | MDR-TB | lineage4.8 | se | ERR4829002 | MDR-TB | lineage4.8 | it | ERR5864920 | MDR-TB | lineage4.1.2.1 | None | ERR6865342 | Other | lineage4.1.2.1 | None | ERR9030473 | MDR-TB | lineage3.1.1 | None | SRR1175470 | Pre-XDR-TB | lineage4.8 | ro | SRR1166818 | MDR-TB | lineage4.8 | None | SRR14164852 | Other | lineage4.1.2.1 | None | SRR14164416 | Other | lineage4.1.2.1 | None | ERR3077957 | MDR-TB | lineage4.3.4.2.1 | None | SRR5341307 | Pre-XDR-TB | lineage3 | in | SRR23086726 | Pre-XDR-TB | lineage4.8 | None | SRR7341666 | MDR-TB | lineage4.8 | ro | ERR4831271 | MDR-TB | lineage4.8 | de | ERR3078003 | MDR-TB | lineage4.3.4.2.1 | None | ERR987747 | MDR-TB | lineage3 | None | ERR6866337 | Other | lineage4.1.2.1 | None | ERR5864919 | MDR-TB | lineage4.1.2.1 | None | ERR6866441 | Other | lineage4.1.2.1 | None | SRR14088386 | Pre-XDR-TB | lineage3 | None | SRR3055246 | HR-TB | lineage3 | None | SRR2101157 | Other | lineage3 | None | SRR7341696 | MDR-TB | lineage4.8 | ro | SRR7592369 | MDR-TB | lineage4.8 | None | SRR1166130 | MDR-TB | lineage4.8 | ro | SRR9738476 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR23086710 | Pre-XDR-TB | lineage4.8 | None | SRR14519751 | Other | lineage3 | None | SRR12199463 | Other | lineage4.5 | None | SRR23086728 | Pre-XDR-TB | lineage4.8 | None | SRR23086729 | Pre-XDR-TB | lineage4.8 | None | ERR1034688 | Pre-XDR-TB | lineage4.2.2 | in | ERR11043439 | MDR-TB | lineage4.8 | None | ERR10748282 | MDR-TB | lineage4.1.1.3 | None | ERR3287780 | HR-TB | lineage4.8 | pe | ERR11043546 | MDR-TB | lineage4.8 | None | ERR114512 | HR-TB | lineage3 | None | ERR3639707 | MDR-TB | lineage4.8 | None | ERR330719 | Other | lineage3 | None | ERR4024915 | Other | lineage4.1.2.1 | None | ERR4025042 | Other | lineage4.1.2.1 | None | ERR4025022 | Other | lineage4.1.2.1 | None | ERR4178108 | Other | lineage4.1.2.1 | None | ERR4178137 | Other | lineage4.1.2.1 | None |
---|