EBG00000313325 - n.653C>A
Drug resistance types
7 Sensitive
15 RR-TB
14 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
131 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 19 |
| lineage4.6.2.2 | 5 |
| lineage4.3.4.2.1 | 3 |
| lineage4.7 | 3 |
| lineage5.1.4 | 1 |
| lineage2.2.1 | 13 |
| lineage4.3.3 | 12 |
| lineage4.3.4.2 | 3 |
| lineage4.6.5 | 1 |
| lineage1.2.2.2 | 5 |
| lineage4 | 2 |
| lineage3 | 19 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1 | 15 |
| lineage1.1.2 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.2 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage4.6.3 | 1 |
| 4 | |
| lineage2.2 | 1 |
| lineage3.1 | 3 |
| lineage4.1.2 | 3 |
| lineage4.8.1 | 1 |
| lineage4.2.1.1 | 3 |
| lineage4.1.1.3 | 5 |
| lineage4.3.2.1 | 1 |
| lineage4.5 | 2 |
| lineage1 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1 | 1 |
| lineage4.2.2.1 | 2 |
| lineage4.1.1 | 2 |
| lineage4.3.2 | 3 |
| lineage4.1.1.3.1 | 3 |
| lineage3.1.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1.1 | 2 |
| lineage1.1.3 | 1 |
| La3 | 1 |
| lineage4.9 | 6 |
| lineage3.1.1 | 5 |
| lineage6.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 50 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815299 | Other | lineage4.8 | gb | ERR4814783 | Other | lineage4.7 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR4814681 | Other | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814761 | Other | lineage4.8 | gb | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4815419 | Other | lineage4.8 | None | ERR4815463 | Other | lineage4.3.4.2 | gb | ERR4818401 | HR-TB | lineage2.2.1 | gb | ERR4814745 | Other | lineage4.6.5 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR4815534 | Other | lineage4 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR3675288 | Other | lineage3 | None | ERR4816941 | Sensitive | lineage2.2.1 | None | ERR4815040 | Other | lineage4.2.2.2 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | ERR4816182 | Other | lineage3.1.2.1 | gb | ERR4816043 | Other | lineage4.2 | None | ERR4816134 | Other | lineage1.2.1.2.1 | gb | ERR4817368 | Other | lineage4.6.3 | None | ERR4817060 | RR-TB | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816464 | Other | lineage3 | None | ERR4816545 | Other | None | ERR4816627 | Other | lineage2.2 | None | ERR4817492 | HR-TB | lineage3.1 | gb | ERR4817294 | Other | lineage4.1.2 | None | ERR4816752 | Other | lineage4.1.2.1 | None | ERR4817402 | Other | lineage4.8 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816933 | Other | lineage4.1.1.3 | None | ERR4818986 | Other | lineage4.3.2.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4817970 | MDR-TB | lineage2.2.1 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR2510768 | Other | lineage4.8 | it | ERR4818065 | Other | lineage4.1.2.1 | None | ERR4817987 | Other | lineage4.7 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR2513440 | Other | lineage4.1.1.3 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR4818797 | Other | lineage4.5 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR4818189 | Sensitive | lineage1.1.3.1 | gb | ERR2512493 | RR-TB | lineage4.1 | gb | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818892 | MDR-TB | lineage4.2.2.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818274 | Other | lineage4 | None | ERR2512599 | Other | lineage3 | gb | ERR4818370 | Other | lineage4.1.1 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2509885 | RR-TB | lineage3 | None | ERR4818556 | Other | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4818580 | Other | lineage4.7 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4817540 | Other | lineage4.3.4.2 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4817607 | Sensitive | lineage4.2.1.1 | gb | ERR4819101 | Sensitive | lineage4.1.1 | gb | ERR2513619 | Other | lineage4.8 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819206 | Other | lineage4.8 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR4820270 | MDR-TB | lineage4.8 | gb | ERR4819284 | Other | lineage4.3.4.1 | None | ERR4819332 | Other | lineage3 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820328 | Other | lineage3 | gb | ERR4820719 | Other | lineage1.2.2.2 | None | ERR4819522 | Other | lineage4.2.1 | gb | ERR4820746 | RR-TB | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819630 | Other | lineage4.8 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819613 | Sensitive | lineage4.3.1.1 | gb | ERR4819655 | Other | lineage4.8 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820471 | Other | lineage3 | gb | ERR2514540 | Other | lineage3 | gb | ERR2514630 | Other | lineage3.1.2.1 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR2514608 | Other | lineage1.1.3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820543 | Other | La3 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820060 | Other | lineage4.3.3 | None | ERR4820679 | Other | lineage4.8 | None | ERR2515007 | Other | lineage3 | None | ERR4820059 | Other | lineage3 | None | ERR4820100 | Other | lineage4.3.3 | None | ERR4820666 | Other | lineage4.8 | gb | ERR4820187 | Other | lineage4.3.3 | None | ERR4821109 | Other | lineage4.1.2.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4821085 | Other | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821849 | Other | lineage4.5 | gb | ERR4822085 | Other | lineage4.8 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821958 | Other | lineage4.3.3 | gb | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | ERR4822066 | HR-TB | lineage4.1.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821526 | Other | lineage4.3.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045910 | Other | lineage3.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045894 | Other | lineage4.8 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6045288 | Other | lineage3 | gb | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046391 | Other | lineage4.1.1.3 | gb | SRR6046398 | Other | lineage4.1.1.3.1 | gb | ERR4829084 | Sensitive | lineage2.2.1 | it | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046716 | Other | lineage3 | gb | SRR6855915 | Sensitive | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR7131122 | Other | lineage2.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1140942 | Other | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None |
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