EBG00000313325 - n.699_700delCA
Drug resistance types
4 Sensitive
3 RR-TB
4 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 1 |
| La1.7.1 | 1 |
| lineage2.2.1 | 4 |
| lineage4.9.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3 | 6 |
| lineage4.8 | 3 |
| lineage4.9 | 2 |
| lineage4.1.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791899 | HR-TB | La1.8.1 | None | SRR1791909 | Other | La1.7.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR4820203 | HR-TB | lineage4.6.2.2 | gb | ERR4817498 | Other | lineage3 | gb | SRR21728339 | Other | lineage3 | None | ERR4816969 | Other | lineage4.8 | None | ERR2228822 | Other | lineage4.9 | None | ERR4818945 | Other | lineage4.1.3 | None | ERR4820250 | HR-TB | lineage1.2.1.2.1 | None | SRR5341423 | Other | lineage1.1.2 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR4819379 | Sensitive | lineage4.1.2.1 | gb | ERR4821868 | Other | lineage2.2.1 | None | ERR4819999 | Sensitive | lineage4.8 | gb | ERR4820645 | Other | lineage4.1.2 | None | ERR4820135 | Other | lineage4.1.2.1 | None | ERR4820917 | Other | lineage4.1.2.1 | None | ERR4821848 | Other | lineage2.2.1 | None | ERR4821875 | Sensitive | lineage3 | None | ERR4821566 | RR-TB | lineage1.2.1.2.1 | None | ERR4423724 | RR-TB | lineage3 | None | SRR6045859 | Other | lineage3 | None | SRR6832507 | Other | lineage4.8 | None | ERR4821583 | Sensitive | lineage4.1.2.1 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR1172359 | Pre-XDR-TB | lineage4.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR1173025 | Other | lineage4.9 | None |
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