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SRA data
Rv0001
- c.1500C>G
Drug resistance types
1 Sensitive
1 RR-TB
4 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
2
lineage2.2.1.1
2
2
lineage4.9;lineage9
2
lineage4.3.3
1
lineage4.1.2.1
1
lineage4.3.2;lineage4.9
1
lineage4.9;lineage6.3
1
La2;lineage4.9;lineage9
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11049758
Sensitive
lineage4.1.2.1
None
ERR13250071
Pre-XDR-TB
lineage4.3.3
None
ERR234659
Other
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR502524
HR-TB
lineage4.9;lineage6.3
None
ERR736865
HR-TB
lineage4.3.2;lineage4.9
None
ERR987722
MDR-TB
None
SRR1174897
MDR-TB
lineage4.9;lineage9
None
SRR1180147
Other
lineage2.2.1.1
None
SRR1180226
HR-TB
lineage4.9
None
Showing 1 to 10 of 13 entries
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