Rv0005 - c.-163_-162insC


Drug resistance types
54 Sensitive 1 RR-TB 1 HR-TB 36 MDR-TB 17 Pre-XDR-TB 2 XDR-TB 14 Other
lineage Counts
lineage Count
lineage1.1.3.2 20
lineage2.2.1 23
lineage4.6.1.2 8
lineage4.5 1
lineage1.1.2 17
lineage4.4.2 2
lineage4.1.4 2
lineage2.2.1.1 5
lineage4.8 8
lineage3 5
lineage1.1.1.1 2
lineage4.3.4.2 1
lineage4 4
lineage4.3.3 2
lineage4.1.2.1 5
lineage4.4.1.1;lineage4.7 2
lineage4.6.4 2
lineage1.1.3.3 2
lineage2.2.2 2
lineage4.1.2;lineage4.2.2.2 1
lineage1.2.2.2 1
lineage3.1.2.1 1
lineage4.4.1.1 1
lineage4.1.1.3 1
lineage3.1.2 1
lineage4.1.1 1
lineage4.3.3;lineage4.8 1
La1.2 1
lineage4.4 1
lineage4.2.1.1 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 125
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11043920 MDR-TB lineage1.1.3.2 None
SRR28045192 Sensitive lineage2.2.1 None
SRR21279420 Sensitive lineage2.2.1 None
ERR6359093 MDR-TB lineage4.6.1.2 None
ERR2446103 Sensitive lineage1.1.3.2 nl
ERR4810773 Sensitive lineage4.5 cn
ERR11044874 Sensitive lineage1.1.3.2 None
SRR28045709 Other lineage1.1.2 None
SRR28044541 Pre-XDR-TB lineage1.1.2 None
SRR28044721 Sensitive lineage1.1.2 None
SRR15368792 Pre-XDR-TB lineage4.4.2 None
ERR11465760 Sensitive lineage1.1.3.2 None
SRR7592355 Pre-XDR-TB lineage4.1.4 None
ERR7821206 Sensitive lineage2.2.1.1 None
ERR7911699 Pre-XDR-TB lineage4.8 za
SRR10808904 Sensitive lineage4.8 None
SRR6832670 Sensitive lineage4.8 None
SRR28046119 Sensitive lineage3 None
ERR11775957 Sensitive lineage2.2.1 None
ERR4553964 MDR-TB lineage1.1.2 None
ERR1035096 Pre-XDR-TB lineage1.1.1.1 vn
ERR2653112 Pre-XDR-TB lineage4.8 None
ERR4799836 Other lineage1.1.2 in
SRR5341359 Pre-XDR-TB lineage1.1.2 in
ERR11082372 Sensitive lineage4.3.4.2 None
ERR4799333 Pre-XDR-TB lineage3 in
ERR6358743 Pre-XDR-TB lineage4.6.1.2 None
ERR2517302 Sensitive lineage1.1.3.2 nl
ERR551952 MDR-TB lineage4 None
SRR15316291 Sensitive lineage2.2.1.1 None
SAMN02360569 MDR-TB lineage2.2.1 kr
SRR006916 Sensitive lineage1.1.3.2 tz
SRR1013580 MDR-TB lineage2.2.1 None
SRR28868676 Other lineage1.1.3.2 None
SRR25534479 MDR-TB lineage2.2.1 None
ERR133979 Sensitive lineage2.2.1 ru
ERR2510564 MDR-TB lineage3 None
SRR28045713 Other lineage1.1.2 None
SRR28868637 Other lineage1.1.3.2 None
SRR29538930 MDR-TB lineage4.3.3 None
ERR11082028 Sensitive lineage4.1.2.1 None
SRR28868888 Other lineage1.1.3.2 None
ERR3273145 MDR-TB lineage2.2.1 None
SRR20139558 Pre-XDR-TB lineage4.1.4 None
ERR4024599 Sensitive lineage4.4.1.1;lineage4.7 None
SRR25207118 MDR-TB lineage2.2.1 None
SRR28045189 Sensitive lineage2.2.1 None
ERR3994114 Sensitive lineage4.1.2.1 None
ERR4423677 MDR-TB lineage4.6.1.2 None
ERR1679639 Other lineage4.6.4 None
ERR11252740 Sensitive lineage1.1.3.2 None
ERR4800037 Sensitive lineage1.1.3.3 in
ERR4423676 MDR-TB lineage4.6.1.2 None
ERR6865556 Sensitive lineage4.4.1.1;lineage4.7 None
ERR3275560 Sensitive lineage1.1.3.2 nl
SRR21277863 Pre-XDR-TB lineage4.4.2 None
SRR15316187 Sensitive lineage2.2.2 None
ERR4423675 Sensitive lineage4.6.1.2 None
ERR13261071 Sensitive lineage1.1.2 None
SRR1048962 MDR-TB lineage2.2.1 None
ERR9806927 Pre-XDR-TB lineage4.8 None
ERR1679641 Other lineage4.6.4 None
ERR8774328 MDR-TB lineage4.6.1.2 None
SRR15316283 Sensitive lineage2.2.1.1 None
SRR1159526 MDR-TB lineage2.2.1 None
ERR3994125 Sensitive lineage4.1.2.1 None
ERR8774327 Sensitive lineage4.6.1.2 None
SRR24710055 MDR-TB lineage2.2.1 None
ERR4800438 Sensitive lineage4.8 in
SRR6982231 Sensitive lineage4.1.2;lineage4.2.2.2 None
SRR20969530 Sensitive lineage2.2.1 None
ERR13246349 Sensitive lineage2.2.1.1 None
ERR4799606 MDR-TB lineage1.2.2.2 in
ERR330686 Sensitive lineage1.1.3.2 None
SRR12142343 Pre-XDR-TB lineage2.2.1 None
ERR13232481 MDR-TB lineage1.1.1.1 None
SRR26112716 Sensitive lineage3.1.2.1 None
SRR29385396 Pre-XDR-TB lineage2.2.1 None
ERR4818295 HR-TB lineage1.1.3.2 gb
SAMN02419560 MDR-TB lineage2.2.1 by
SRR6061407 Sensitive lineage4.4.1.1 ca
SRR28046165 Sensitive lineage1.1.2 None
SRR14520115 Sensitive lineage1.1.3.3 None
ERR11043930 Sensitive lineage4.1.2.1 None
SRR1159521 MDR-TB lineage2.2.1 None
SRR28868463 Other lineage1.1.3.2 None
ERR2184602 Sensitive lineage4.8 pe
SRR1013579 MDR-TB lineage2.2.1 None
ERR4811077 Sensitive lineage2.2.1 cn
SAMEA2534311 MDR-TB lineage4 uz
ERR4829932 Pre-XDR-TB lineage1.1.2 None
SRR29803436 MDR-TB lineage4.1.1.3 None
SRR2101124 Sensitive lineage1.1.3.2 None
ERR4827953 MDR-TB lineage2.2.1 None
ERR8774329 MDR-TB lineage4.6.1.2 None
SRR28045048 Pre-XDR-TB lineage1.1.2 None
SRR28045712 Other lineage1.1.2 None
SRR28393383 Sensitive lineage2.2.1 None
SRR28046369 Other lineage1.1.2 None
SRR12882343 Sensitive lineage1.1.3.2 None
ERR4799369 Other lineage3.1.2 None
SRR1048963 MDR-TB lineage2.2.1 None
ERR11049762 Sensitive lineage1.1.2 None
ERR13260266 MDR-TB lineage4.1.1 None
DRR188601 Sensitive lineage2.2.1.1 None
ERR4812981 MDR-TB lineage4.3.3;lineage4.8 pe
ERR11044959 Sensitive lineage1.1.3.2 None
ERR551951_ERR551952 MDR-TB lineage4 None
SRR15723024 Pre-XDR-TB lineage2.2.2 None
SRR25827485 MDR-TB lineage1.1.2 None
SRR6480355 Sensitive lineage4.1.2.1 None
ERR11044084 Other La1.2 None
ERR551951 MDR-TB lineage4 None
SRR29017582 MDR-TB lineage1.1.2 None
SRR3732642 Sensitive lineage4.3.3 None
ERR13266932 Sensitive lineage4.4 None
SRR29681213 MDR-TB lineage4.2.1.1 None
ERR2815583 Other La1.7.1 None
ERR11044853 Sensitive lineage1.1.3.2 None
SRR29772400 MDR-TB lineage1.1.2 None
SRR29017075 XDR-TB lineage3 None
ERR2513368 Sensitive lineage1.1.3.2 gb
SRR29440790 RR-TB lineage1.1.3.2 None
ERR13112016 XDR-TB lineage3 None
SRR29273676 MDR-TB lineage4.8 None