Rv0005 - c.-163_-162insC


Drug resistance types
51 Sensitive 0 RR-TB 1 HR-TB 28 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 10 Other
lineage Counts
lineage Count
lineage1.1.3.2 15
lineage4.4.2 2
lineage1.1.2 14
lineage3 3
lineage2.2.1 21
lineage4.8 7
lineage1.1.1.1 1
lineage3.1.2.1 1
lineage4.1.2.1 5
lineage2.2.1.1 4
lineage2.2.2 2
lineage1.2.2.2 1
lineage4.1.2;lineage4.2.2.2 1
lineage4.6.1.2 8
La1.7.1 1
lineage4.4.1.1;lineage4.7 2
lineage4.6.4 2
lineage1.1.3.3 2
lineage3.1.2 1
lineage4.3.3;lineage4.8 1
La1.2 1
lineage4.4.1.1 1
lineage4.3.4.2 1
lineage4.1.4 2
lineage4 4
lineage4.3.3 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 105
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11044874 Sensitive lineage1.1.3.2 None
SRR21277863 Pre-XDR-TB lineage4.4.2 None
ERR3275560 Sensitive lineage1.1.3.2 nl
SRR28045048 Pre-XDR-TB lineage1.1.2 None
SRR28046119 Sensitive lineage3 None
ERR11775957 Sensitive lineage2.2.1 None
SRR28045189 Sensitive lineage2.2.1 None
SRR28046165 Sensitive lineage1.1.2 None
SRR28044721 Sensitive lineage1.1.2 None
SRR6832670 Sensitive lineage4.8 None
ERR4553964 MDR-TB lineage1.1.2 None
ERR1035096 Pre-XDR-TB lineage1.1.1.1 vn
ERR9806927 Pre-XDR-TB lineage4.8 None
SRR26112716 Sensitive lineage3.1.2.1 None
ERR11082028 Sensitive lineage4.1.2.1 None
ERR11049762 Sensitive lineage1.1.2 None
SRR15316283 Sensitive lineage2.2.1.1 None
ERR3994125 Sensitive lineage4.1.2.1 None
SRR15723024 Pre-XDR-TB lineage2.2.2 None
DRR188601 Sensitive lineage2.2.1.1 None
ERR4799606 MDR-TB lineage1.2.2.2 in
SRR1159526 MDR-TB lineage2.2.1 None
ERR3994114 Sensitive lineage4.1.2.1 None
SRR6982231 Sensitive lineage4.1.2;lineage4.2.2.2 None
ERR133979 Sensitive lineage2.2.1 ru
ERR8774327 Sensitive lineage4.6.1.2 None
ERR2815583 Other La1.7.1 None
SRR5341359 Pre-XDR-TB lineage1.1.2 in
ERR2510564 MDR-TB lineage3 None
ERR4024599 Sensitive lineage4.4.1.1;lineage4.7 None
ERR11043930 Sensitive lineage4.1.2.1 None
ERR2184602 Sensitive lineage4.8 pe
ERR3273145 MDR-TB lineage2.2.1 None
ERR4423675 Sensitive lineage4.6.1.2 None
ERR4811077 Sensitive lineage2.2.1 cn
ERR4827953 MDR-TB lineage2.2.1 None
ERR7911699 Pre-XDR-TB lineage4.8 za
ERR6359093 MDR-TB lineage4.6.1.2 None
SRR15368792 Pre-XDR-TB lineage4.4.2 None
ERR2446103 Sensitive lineage1.1.3.2 nl
SRR10808904 Sensitive lineage4.8 None
ERR4818295 HR-TB lineage1.1.3.2 gb
ERR1679639 Other lineage4.6.4 None
SRR28045709 Other lineage1.1.2 None
SRR28044541 Pre-XDR-TB lineage1.1.2 None
ERR11252740 Sensitive lineage1.1.3.2 None
SRR28045712 Other lineage1.1.2 None
SRR28393383 Sensitive lineage2.2.1 None
ERR4800037 Sensitive lineage1.1.3.3 in
ERR4799369 Other lineage3.1.2 None
ERR8774329 MDR-TB lineage4.6.1.2 None
ERR2653112 Pre-XDR-TB lineage4.8 None
ERR4799333 Pre-XDR-TB lineage3 in
ERR2517302 Sensitive lineage1.1.3.2 nl
ERR4812981 MDR-TB lineage4.3.3;lineage4.8 pe
SRR24710055 MDR-TB lineage2.2.1 None
ERR4800438 Sensitive lineage4.8 in
SRR6480355 Sensitive lineage4.1.2.1 None
ERR11044084 Other La1.2 None
SRR006916 Sensitive lineage1.1.3.2 tz
SRR12882343 Sensitive lineage1.1.3.2 None
ERR1679641 Other lineage4.6.4 None
ERR11044853 Sensitive lineage1.1.3.2 None
ERR11044959 Sensitive lineage1.1.3.2 None
ERR6865556 Sensitive lineage4.4.1.1;lineage4.7 None
SRR6061407 Sensitive lineage4.4.1.1 ca
ERR11082372 Sensitive lineage4.3.4.2 None
SRR14520115 Sensitive lineage1.1.3.3 None
SRR1159521 MDR-TB lineage2.2.1 None
SRR15316291 Sensitive lineage2.2.1.1 None
ERR4829932 Pre-XDR-TB lineage1.1.2 None
SRR7592355 Pre-XDR-TB lineage4.1.4 None
SRR2101124 Sensitive lineage1.1.3.2 None
SAMN02419560 MDR-TB lineage2.2.1 by
ERR11465760 Sensitive lineage1.1.3.2 None
ERR8774328 MDR-TB lineage4.6.1.2 None
SRR28045192 Sensitive lineage2.2.1 None
SRR28045713 Other lineage1.1.2 None
SRR28046369 Other lineage1.1.2 None
SRR15316187 Sensitive lineage2.2.2 None
ERR551951_ERR551952 MDR-TB lineage4 None
SAMN02360569 MDR-TB lineage2.2.1 kr
SRR1048962 MDR-TB lineage2.2.1 None
SRR1013579 MDR-TB lineage2.2.1 None
SRR1048963 MDR-TB lineage2.2.1 None
SRR3732642 Sensitive lineage4.3.3 None
ERR4423676 MDR-TB lineage4.6.1.2 None
SRR1013580 MDR-TB lineage2.2.1 None
ERR551951 MDR-TB lineage4 None
ERR7821206 Sensitive lineage2.2.1.1 None
SRR25534479 MDR-TB lineage2.2.1 None
ERR6358743 Pre-XDR-TB lineage4.6.1.2 None
ERR4799836 Other lineage1.1.2 in
SRR21279420 Sensitive lineage2.2.1 None
SRR25827485 MDR-TB lineage1.1.2 None
ERR551952 MDR-TB lineage4 None
ERR2513368 Sensitive lineage1.1.3.2 gb
SRR20969530 Sensitive lineage2.2.1 None
ERR4423677 MDR-TB lineage4.6.1.2 None
SAMEA2534311 MDR-TB lineage4 uz
ERR11043920 MDR-TB lineage1.1.3.2 None
SRR20139558 Pre-XDR-TB lineage4.1.4 None
SRR25207118 MDR-TB lineage2.2.1 None
ERR330686 Sensitive lineage1.1.3.2 None
ERR4810773 Sensitive lineage4.5 cn