Rv0005 - c.-163_-162insC
Drug resistance types
40 Sensitive
0 RR-TB
1 HR-TB
24 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.8 | 8 |
| lineage2.2.1 | 15 |
| lineage2.2.1.1 | 4 |
| lineage4.2.2.2;lineage4.1.2 | 1 |
| lineage4.1.4 | 2 |
| lineage1.1.3.2 | 13 |
| La1.2 | 1 |
| lineage4.7;lineage4.4.1.1 | 2 |
| lineage4.6.1 | 3 |
| lineage4.6.1.2 | 6 |
| lineage3 | 2 |
| 1 | |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.3 | 2 |
| lineage4.5 | 1 |
| lineage2.2.2 | 2 |
| lineage4.4.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6.4 | 2 |
| lineage4.8;lineage4.3.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11049762 | Sensitive | lineage1.1.2 | None | ERR1035096 | Pre-XDR-TB | lineage1.1.1.1 | vn | SRR6061407 | Sensitive | lineage4.4.1.1 | ca | SRR6480355 | Sensitive | lineage4.1.2.1 | None | SRR6832670 | Sensitive | lineage4.8 | None | SRR6831725 | Sensitive | lineage4.8 | None | SAMN02360569 | MDR-TB | lineage2.2.1 | kr | DRR188601 | Sensitive | lineage2.2.1.1 | None | SRR6982231 | Sensitive | lineage4.2.2.2;lineage4.1.2 | None | SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None | ERR330686 | Sensitive | lineage1.1.3.2 | None | ERR11043930 | Sensitive | lineage4.1.2.1 | None | ERR11044853 | Sensitive | lineage1.1.3.2 | None | ERR11044874 | Sensitive | lineage1.1.3.2 | None | ERR11043920 | MDR-TB | lineage1.1.3.2 | None | ERR11044084 | Other | La1.2 | None | ERR11044959 | Sensitive | lineage1.1.3.2 | None | ERR133979 | Sensitive | lineage2.2.1 | ru | ERR3273145 | MDR-TB | lineage2.2.1 | None | ERR3994125 | Sensitive | lineage4.1.2.1 | None | ERR3994114 | Sensitive | lineage4.1.2.1 | None | ERR4024599 | Sensitive | lineage4.7;lineage4.4.1.1 | None | ERR4423674 | MDR-TB | lineage4.6.1 | None | ERR4423676 | MDR-TB | lineage4.6.1.2 | None | ERR4799333 | Pre-XDR-TB | lineage3 | in | ERR4423677 | MDR-TB | lineage4.6.1.2 | None | ERR4553964 | MDR-TB | None | ERR4799836 | Other | lineage1.1.2 | in | ERR4799369 | Other | lineage3.1.2 | None | ERR4799606 | MDR-TB | lineage1.2.2.2 | in | ERR7911699 | Pre-XDR-TB | lineage4.8 | za | ERR6358743 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR6359093 | MDR-TB | lineage4.6.1.2 | None | ERR6865556 | Sensitive | lineage4.7;lineage4.4.1.1 | None | ERR7821206 | Sensitive | lineage2.2.1.1 | None | ERR4800037 | Sensitive | lineage1.1.3.3 | in | ERR4800438 | Sensitive | lineage4.8 | in | ERR4810773 | Sensitive | lineage4.5 | cn | ERR4811077 | Sensitive | lineage2.2.1 | cn | SRR1013579 | MDR-TB | lineage2.2.1 | None | ERR8774327 | MDR-TB | lineage4.6.1 | None | ERR8774326 | MDR-TB | lineage4.6.1 | None | ERR8774328 | MDR-TB | lineage4.6.1.2 | None | ERR8774329 | MDR-TB | lineage4.6.1.2 | None | SRR1013580 | MDR-TB | lineage2.2.1 | None | SRR1159526 | MDR-TB | lineage2.2.1 | None | SRR1048962 | MDR-TB | lineage2.2.1 | None | SRR1048963 | MDR-TB | lineage2.2.1 | None | SRR10808904 | Sensitive | lineage4.8 | None | SRR1159521 | MDR-TB | lineage2.2.1 | None | SRR12142343 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316291 | Sensitive | lineage2.2.1.1 | None | SRR12882343 | Sensitive | lineage1.1.3.2 | None | SRR14520115 | Sensitive | lineage1.1.3.3 | None | SRR15316187 | Sensitive | lineage2.2.2 | None | SRR15316283 | Sensitive | lineage2.2.1.1 | None | SRR20139558 | Pre-XDR-TB | lineage4.1.4 | None | SRR15368792 | Pre-XDR-TB | lineage4.4.2 | None | SRR15723024 | Pre-XDR-TB | lineage2.2.2 | None | SRR21279420 | Sensitive | lineage2.2.1 | None | SRR20969530 | Sensitive | lineage2.2.1 | None | SRR2101124 | Sensitive | lineage1.1.3.2 | None | SRR21277863 | Pre-XDR-TB | lineage4.4.2 | None | ERR11082028 | Sensitive | lineage4.1.2.1 | None | ERR11082372 | Sensitive | lineage4.3.4.2 | None | ERR9806927 | Pre-XDR-TB | lineage4.8 | None | ERR1679641 | Other | lineage4.6.4 | None | ERR1679639 | Other | lineage4.6.4 | None | ERR4812981 | MDR-TB | lineage4.8;lineage4.3.3 | pe | ERR2184602 | Sensitive | lineage4.8 | pe | SRR3732642 | Sensitive | lineage4.3.3 | None | SRR006916 | Sensitive | lineage1.1.3.2 | tz | ERR2513368 | Sensitive | lineage1.1.3.2 | gb | ERR2517302 | Sensitive | lineage1.1.3.2 | nl | ERR2510564 | MDR-TB | lineage3 | None | ERR4818295 | HR-TB | lineage1.1.3.2 | gb | SAMEA2534311 | MDR-TB | lineage4 | uz | ERR2446103 | Sensitive | lineage1.1.3.2 | nl | SAMN02419560 | MDR-TB | lineage2.2.1 | by | ERR2653112 | Pre-XDR-TB | lineage4.8 | None | SRR5341359 | Pre-XDR-TB | lineage1.1.2 | in | ERR2815583 | Other | La1.7.1 | None | ERR4827953 | MDR-TB | lineage2.2.1 | None | ERR3275560 | Sensitive | lineage1.1.3.2 | nl | ERR4829932 | Pre-XDR-TB | lineage1.1.2 | None |
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