lineage | Count |
---|---|
78 | |
lineage4.9 | 1 |
lineage2.2.1 | 1 |
lineage5.2 | 2 |
lineage2 | 1 |
lineage2.2 | 1 |
lineage4.1.2.1 | 2 |
lineage4.6.2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage4.5 | 1 |
lineage4.9;La3 | 1 |
lineage4 | 2 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR2693239 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046514 | HR-TB | None | ERR323036 | HR-TB | None | SRR6325442 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR294248 | HR-TB | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR1063859 | HR-TB | None | ERR323041 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3439432 | Other | None | ERR3283036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR5336148 | Other | None | ERR4407463 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR8976043 | HR-TB | None | ERR702406 | HR-TB | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1020010 | Sensitive | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9787197 | Other | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR158583 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675550 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR7496472 | Other | None |
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