Rv0006 - c.1009C>T
Drug resistance types
20 Sensitive
0 RR-TB
3 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 17 |
| lineage4.9 | 3 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| lineage4.1.1.3 | 4 |
| La2;lineage2.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR718520 | Sensitive | lineage1.1.1 | th | ERR751795 | Sensitive | lineage1.1.1 | th | ERR751841 | HR-TB | lineage1.1.1 | th | SRR22249808 | Sensitive | lineage1.1.1 | None | SRR3675248 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR751870 | Sensitive | lineage1.1.1 | th | ERR767991 | Sensitive | lineage1.1.1 | th | ERR752178 | Sensitive | lineage1.1.1;lineage1.1.3.3 | th | ERR768007 | Sensitive | lineage1.1.1 | th | ERR718539 | Sensitive | lineage1.1.1 | th | ERR552619 | Sensitive | lineage4.1.1.3 | None | ERR552621 | Sensitive | lineage4.1.1.3 | None | SRR22251878 | Sensitive | lineage1.1.1 | None | ERR718341 | Sensitive | lineage1.1.1 | th | ERR767981 | HR-TB | lineage1.1.1 | th | ERR752068 | Sensitive | lineage1.1.1 | th | ERR2704679 | Sensitive | lineage1.1.1 | cn | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR752192 | Sensitive | lineage1.1.1 | th | ERR4811493 | HR-TB | lineage4.9 | None | ERR552622 | Sensitive | lineage4.1.1.3 | None | ERR2514692 | Other | None | ERR752235 | Sensitive | lineage1.1.1 | th | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR751921 | Sensitive | lineage1.1.1 | th | ERR752085 | Sensitive | lineage1.1.1 | th | ERR552620 | Sensitive | lineage4.1.1.3 | None |
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