TB-Profiler
Home
Upload
SRA data
Rv0006
- c.159C>A
Drug resistance types
3 Sensitive
0 RR-TB
2 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
6
lineage4.1.1.3
1
La1.7;lineage4.9;lineage6
1
lineage3
1
lineage4.6.3;lineage4.9
1
lineage4
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
Showing 1 to 7 of 7 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
12
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063883
HR-TB
lineage4.9
None
ERR2446566
Other
lineage4.9
None
ERR323115
Sensitive
lineage4.9
None
ERR6358979
Other
lineage4.9
None
ERR6359045
Other
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
None
ERR6866410
Sensitive
lineage4.9
None
ERR6866547
Other
La1.7;lineage4.9;lineage6
None
ERR779852
Sensitive
lineage4.9
None
SRR28351339
MDR-TB
lineage4
None
SRR28351347
Other
lineage3
None
Showing 1 to 10 of 12 entries
Previous
1
2
Next