Rv0006 - c.382_384delAGGinsCT
Drug resistance types
7 Sensitive
1 RR-TB
26 HR-TB
0 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| lineage3.1 | 1 |
| lineage4 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| La3;lineage4.9 | 4 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1.8.1 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4596910 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811031 | Other | lineage4.5 | None | ERR4811030 | Other | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR3797073 | Other | La1.8.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR400345 | Other | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
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