lineage | Count |
---|---|
lineage3.1 | 1 |
60 | |
lineage4 | 2 |
lineage2.2.1 | 5 |
lineage4.9 | 3 |
La1.2 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage2 | 1 |
lineage4.5 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | ERR323034 | HR-TB | lineage3.1 | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR5311081 | HR-TB | None | ERR502532 | HR-TB | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR4769497 | HR-TB | La1.2 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | SRR1173629 | Other | None | ERR8976043 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | ERR736874 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1184039 | MDR-TB | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR21732055 | Sensitive | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1640750 | HR-TB | None | SRR1723600 | MDR-TB | lineage2.2.1 | cn | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | SRR6325445 | HR-TB | None | SRR3675234 | Other | None | SRR3675545 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None |
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