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SRA data
Rv0529
- c.-351C>G
Drug resistance types
1 Sensitive
0 RR-TB
4 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
6
La1.7;M.canetti;lineage4.9
2
lineage2.2.1
2
lineage4.2;lineage4.9
1
lineage3.1.2.2
1
M.canetti;lineage4.2;lineage4.9
1
lineage3
1
lineage2.1;lineage4.1.4;lineage4.9
1
lineage2.2.1.1
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR4828872
Sensitive
lineage4.2;lineage4.9
None
SRR1180147
Other
lineage2.2.1.1
None
SRR1183144
Other
lineage2.2.1
None
SRR17658565
Pre-XDR-TB
lineage3
None
SRR26937107
MDR-TB
lineage2.2.1
None
SRR29096410
Other
lineage4.9
None
SRR29097026
Other
lineage4.9
None
SRR3675571
HR-TB
M.canetti;lineage4.2;lineage4.9
None
Showing 1 to 10 of 16 entries
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