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SRA data
Rv0639
- c.684G>C
Drug resistance types
3 Sensitive
1 RR-TB
14 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage2.1;lineage4.9;lineage6.3
3
La1.7;M.canetti;lineage4.9
2
La1.7;lineage4.9
2
lineage2.1;lineage4.9
2
La3;lineage2.1;lineage4.9;lineage6.3
2
1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
1
La1.7
1
La1.7;lineage4.9;lineage7
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
27
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063849
HR-TB
lineage4.9
None
ERR1063858
HR-TB
lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR176560
HR-TB
La1.7;lineage4.9
None
ERR234659
Other
None
ERR323056
HR-TB
lineage4.4.1.2
None
ERR4810741
HR-TB
La3;lineage2.1;lineage6.3
None
ERR4811022
HR-TB
M.canetti;lineage2.1;lineage4.9
None
Showing 1 to 10 of 27 entries
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