lineage | Count |
---|---|
lineage2.2.1 | 5 |
lineage4.1.1 | 6 |
lineage4.8 | 8 |
lineage1.1.3.1 | 1 |
3 | |
lineage4.1.2 | 2 |
lineage4.9 | 7 |
lineage3.1 | 1 |
lineage4 | 4 |
lineage3 | 5 |
lineage4.1.1.1 | 1 |
lineage4.5 | 3 |
lineage1.1.2 | 1 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081840 | Sensitive | lineage4.1.1 | None | SRR18593215 | Pre-XDR-TB | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR21710669 | Sensitive | lineage1.1.3.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR11081841 | Sensitive | lineage4.1.1 | None | SRR3675387 | Sensitive | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR11082292 | Sensitive | lineage4.1.1 | None | ERR11082683 | Sensitive | lineage4.1.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | ERR551188 | Sensitive | lineage4.1.1.1 | de | ERR4820266 | RR-TB | lineage3 | None | ERR502943 | HR-TB | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR551504 | Sensitive | lineage4.1.1 | de | SRR6964552 | HR-TB | lineage3 | None | ERR502951 | Sensitive | lineage4.5 | None | ERR4797603 | RR-TB | lineage1.1.2 | in | SRR9971114 | Other | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR11043377 | Sensitive | lineage4.1.1 | None | ERR4796299 | Sensitive | lineage4.5 | in | ERR7911461 | Sensitive | lineage4 | za | ERR6197026 | RR-TB | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR10305829 | Sensitive | lineage4.5 | None |
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