Rv0668 - c.40_42delCTTinsTG
Drug resistance types
0 Sensitive
1 RR-TB
10 HR-TB
12 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 10 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage3 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045548 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR14782054 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None |
|---|
