Rv0668 - p.Pro1040Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
1 Sensitive
12 RR-TB
5 HR-TB
371 MDR-TB
102 Pre-XDR-TB
14 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1.1 | 255 |
| lineage2.2.1 | 42 |
| lineage4.3.3 | 8 |
| lineage4.1.2.1 | 22 |
| lineage4.8 | 29 |
| lineage4.3.3;lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.3.4.2 | 20 |
| lineage4.1.1 | 16 |
| lineage4.5 | 10 |
| lineage4.1.1.3 | 9 |
| lineage4.3.2.1;lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3 | 15 |
| lineage2.2.2 | 10 |
| lineage4.3.4.1;lineage4.4.1.1.1 | 1 |
| lineage4 | 3 |
| lineage4.2.2.2 | 9 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2.1;lineage4.4.1.1.1 | 6 |
| lineage4.3.4.1 | 4 |
| lineage4.9 | 2 |
| lineage4.9.1 | 3 |
| lineage2.1 | 9 |
| 1 | |
| lineage4.2.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage3.1.2 | 2 |
| lineage4.4.2 | 1 |
| lineage1.1.1.1 | 2 |
| lineage2.2.1;lineage4.4.1.1.1 | 1 |
| lineage4.3.1 | 1 |
| lineage5.1.3 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage2.2.1.1;lineage4.2.2 | 1 |
| lineage5.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 505 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173397 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173212 | MDR-TB | lineage4.4.1.1.1 | None | SRR21277573 | MDR-TB | lineage2.2.1 | None | ERR11488347 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR22536476 | MDR-TB | lineage4.3.3 | None | SRR24710102 | XDR-TB | lineage2.2.1 | None | SRR10315700 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169059 | MDR-TB | lineage4.4.1.1.1 | None | ERR4828984 | MDR-TB | lineage4.1.2.1 | it | ERR9993118 | XDR-TB | lineage4.4.1.1.1 | None | SRR1167390 | MDR-TB | lineage4.4.1.1.1 | None | ERR9992641 | XDR-TB | lineage4.4.1.1.1 | None | ERR9993236 | XDR-TB | lineage4.4.1.1.1 | None | SRR10040219 | MDR-TB | lineage2.2.1 | None | ERR2515410 | MDR-TB | lineage4.4.1.1.1 | za | SRR10315580 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172276 | MDR-TB | lineage4.4.1.1.1 | None | SRR1175359 | MDR-TB | lineage4.4.1.1.1 | None | SRR10828630 | MDR-TB | lineage2.2.1 | None | SRR7592353 | Pre-XDR-TB | lineage4.8 | None | SRR1167251 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173522 | MDR-TB | lineage4.4.1.1.1 | None | ERR11488735 | MDR-TB | lineage4.4.1.1.1 | None | SRR6856113 | MDR-TB | lineage4.4.1.1.1 | None | SRR10303294 | MDR-TB | lineage4.3.3 | None | SRR11349154 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173154 | MDR-TB | lineage4.3.3;lineage4.4.1.1.1 | None | SRR16058413 | MDR-TB | lineage1.2.1.2.1 | None | ERR13285131 | MDR-TB | lineage4.1.2.1 | None | ERR11082819 | MDR-TB | lineage4.8 | None | SRR29273768 | XDR-TB | lineage4.8 | None | ERR13291655 | MDR-TB | lineage4.3.4.2 | None | SRR29016873 | MDR-TB | lineage4.3.4.2 | None | SRR1175305 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173333 | MDR-TB | lineage4.4.1.1.1 | None | SRR1184352 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR13285169 | Pre-XDR-TB | lineage2.2.1 | None | SRR28394014 | Pre-XDR-TB | lineage4.1.1 | None | SRR30180377 | MDR-TB | lineage4.5 | None | ERR2307518 | MDR-TB | lineage2.2.1 | None | SRR1165250 | MDR-TB | lineage4.4.1.1.1 | None | ERR4827988 | MDR-TB | lineage2.2.1 | None | SRR29273685 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1172753 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971283 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172233 | MDR-TB | lineage4.4.1.1.1 | None | ERR13290941 | MDR-TB | lineage4.5 | None | SRR832993 | MDR-TB | lineage4.4.1.1.1 | None | SRR833098 | MDR-TB | lineage4.4.1.1.1 | None | SRR20969991 | Pre-XDR-TB | lineage2.2.1 | None | ERR9124924 | MDR-TB | lineage1.2.1.2.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342635 | MDR-TB | lineage4.8 | None | SAMN02585988 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971274 | MDR-TB | lineage4.4.1.1.1 | None | SRR25207210 | MDR-TB | lineage4.5 | None | SRR29772533 | MDR-TB | lineage4.1.1.3 | None | SRR1175347 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971287 | MDR-TB | lineage4.3.2.1;lineage4.4.1.1.1 | None | ERR11043277 | MDR-TB | lineage4.4.1.1 | None | ERR11069080 | MDR-TB | lineage3 | None | SAMN01828244 | MDR-TB | lineage4.4.1.1.1 | za | SRR28119719 | MDR-TB | lineage2.2.2 | None | SRR1165647 | MDR-TB | lineage4.4.1.1.1 | None | SRR6855861 | MDR-TB | lineage4.4.1.1.1 | None | SRR28394138 | MDR-TB | lineage4.1.1 | None | ERR9806835 | MDR-TB | lineage4.4.1.1.1 | None | ERR11081998 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488968 | MDR-TB | lineage4.3.4.1;lineage4.4.1.1.1 | None | SRR29016788 | Pre-XDR-TB | lineage4.8 | None | SRR10040266 | MDR-TB | lineage2.2.2 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR2653127 | MDR-TB | lineage4.3.4.2 | None | SRR1019165 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10315726 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165237 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165642 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167179 | MDR-TB | lineage4.4.1.1.1 | None | SRR29274126 | Pre-XDR-TB | lineage4.8 | None | SRR1169211 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169221 | MDR-TB | lineage4.4.1.1.1 | None | SRR29273695 | Pre-XDR-TB | lineage4.8 | None | SRR29539833 | MDR-TB | lineage4.3.3 | None | ERR13284389 | MDR-TB | lineage3 | None | SRR15316587 | MDR-TB | lineage2.2.1 | None | ERR11043607 | MDR-TB | lineage4 | None | SRR1169178 | MDR-TB | lineage4.4.1.1.1 | None | SRR29289202 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR25206915 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175041 | MDR-TB | lineage4.4.1.1.1 | None | SRR29289200 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR3148222 | Pre-XDR-TB | lineage4.1.1.3 | mx | SRR29093372 | XDR-TB | lineage2.2.2 | None | ERR5897100 | Pre-XDR-TB | lineage3 | None | ERR4799708 | MDR-TB | lineage3 | in | SRR1167363 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165249 | MDR-TB | lineage4.4.1.1.1 | None | ERR13260133 | MDR-TB | lineage4.1.2 | None | SRR1165706 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165721 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | ERR11488337 | MDR-TB | lineage4.4.1.1.1 | None | SRR15723174 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796895 | MDR-TB | lineage3 | in | SRR29051208 | Sensitive | lineage4.3.4.1 | None | ERR11488478 | MDR-TB | lineage4.4.1.1.1 | None | ERR4828836 | MDR-TB | lineage4.1.2.1 | None | SRR10315648 | MDR-TB | lineage4.9 | None | SRR1165268 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982529 | MDR-TB | lineage4.9.1 | None | ERR7737795 | MDR-TB | lineage4.9.1 | None | SAMN02403555 | MDR-TB | lineage4.4.1.1.1 | sz | ERR13261317 | Pre-XDR-TB | lineage4.8 | None | ERR4828835 | MDR-TB | lineage4.1.2.1 | None | SRR1166328 | Pre-XDR-TB | lineage4.8 | ro | SAMN02403586 | MDR-TB | lineage4.4.1.1.1 | za | SRR2101505 | MDR-TB | lineage4.9.1 | None | ERR13284980 | MDR-TB | lineage2.2.2 | None | SAMN02586015 | MDR-TB | lineage4.4.1.1.1 | za | ERR7737749 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403562 | MDR-TB | lineage4.4.1.1.1 | za | SRR924236 | MDR-TB | lineage4.4.1.1.1 | None | ERR2864256 | MDR-TB | lineage4.3.4.2 | pt | ERR3287731 | MDR-TB | lineage4.1.1 | pe | SRR28467049 | Pre-XDR-TB | lineage2.2.2 | None | SRR28393580 | MDR-TB | lineage4.1.1 | None | SRR28394261 | MDR-TB | lineage4.1.1 | None | SRR1173226 | MDR-TB | lineage4.4.1.1.1 | None | ERR11775612 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR28393904 | MDR-TB | lineage4.3.3 | None | ERR5918146 | MDR-TB | lineage4.4.1.1.1 | za | SRR2024922 | Pre-XDR-TB | lineage2.2.1 | cn | ERR7737922 | MDR-TB | lineage4.4.1.1.1 | None | ERR7911199 | MDR-TB | lineage4.4.1.1.1 | za | ERR4830473 | MDR-TB | lineage4.9 | za | SRR10040499 | MDR-TB | lineage2.2.1 | None | SRR28394179 | MDR-TB | lineage4.1.1 | None | ERR2307416 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019159 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173607 | MDR-TB | lineage4.4.1.1.1 | None | SRR5153709 | Pre-XDR-TB | lineage2.2.1 | None | SRR7592386 | Pre-XDR-TB | lineage4.8 | None | SRR833076 | MDR-TB | lineage4.4.1.1.1 | None | ERR067679 | MDR-TB | lineage4.3.3 | ru | ERR2677415 | MDR-TB | lineage4 | de | SRR5710021 | Pre-XDR-TB | lineage2.1 | th | SRR9971376 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315733 | MDR-TB | lineage4.4.1.1.1 | None | SRR11348141 | MDR-TB | lineage4.3.4.2 | None | SRR11349171 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315581 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11348143 | MDR-TB | lineage4.3.4.2 | None | SRR1140945 | MDR-TB | lineage4.4.1.1.1 | None | ERR13286200 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR13289262 | MDR-TB | lineage4.4.1.1.1 | None | ERR4553431 | RR-TB | None | ERR9992836 | MDR-TB | lineage4.4.1.1.1 | None | ERR2515265 | MDR-TB | lineage4.4.1.1.1 | za | SRR10315636 | MDR-TB | lineage4.4.1.1.1 | None | SRR1019150 | MDR-TB | lineage4.4.1.1.1 | None | SRR10040208 | MDR-TB | lineage2.2.1 | None | SRR10305988 | MDR-TB | lineage2.2.1 | None | ERR8975942 | MDR-TB | lineage4.4.1.1.1 | None | ERR6865349 | RR-TB | lineage4.3.4.2 | None | SRR1165643 | HR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | ERR4811159 | RR-TB | lineage4.2.2 | cn | SRR924241 | MDR-TB | lineage4.4.1.1.1 | None | SRR21576640 | MDR-TB | lineage4.5 | None | ERR2041692 | MDR-TB | lineage4.1.2.1 | None | SRR1173040 | MDR-TB | lineage4.4.1.1.1 | None | SAMN01925676 | MDR-TB | lineage4.4.1.1.1 | None | ERR10748423 | MDR-TB | lineage4.1.1.2 | None | SRR10315586 | MDR-TB | lineage4.4.1.1.1 | None | ERR11488647 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167385 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971284 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971282 | MDR-TB | lineage4.4.1.1.1 | None | SRR15014781 | MDR-TB | lineage4.3.4.2 | None | ERR551529 | MDR-TB | lineage4.4.1.1 | None | SRR1723430 | MDR-TB | lineage2.2.2 | cn | SRR15014681 | MDR-TB | lineage4.3.4.2 | None | SRR18912066 | MDR-TB | lineage4.3.4.2 | None | SRR21887771 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971190 | MDR-TB | lineage4.4.1.1.1 | None | SRR11662441 | MDR-TB | lineage4.2.2 | None | SRR1173144 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169245 | MDR-TB | lineage4.4.1.1.1 | None | ERR13276386 | MDR-TB | lineage4 | None | SRR7131120 | MDR-TB | lineage4.1.2.1 | None | SRR832988 | MDR-TB | lineage4.4.1.1.1 | None | SRR998857 | Pre-XDR-TB | lineage4.2.1 | None | SRR28741144 | MDR-TB | lineage4.5 | None | SRR29081000 | MDR-TB | lineage1.2.1.2.1 | None | SRR1173320 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1165664 | MDR-TB | lineage4.4.1.1.1 | None | ERR13276361 | MDR-TB | lineage4.8 | None | ERR4024954 | RR-TB | lineage4.3.4.2 | None | ERR4830543 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167287 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349178 | MDR-TB | lineage4.4.1.1.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | SRR29274143 | Pre-XDR-TB | lineage4.8 | None | SRR1173181 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1173364 | MDR-TB | lineage4.4.1.1.1 | None | SRR1723487 | MDR-TB | lineage2.2.1 | None | SRR1184313 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR5866027 | HR-TB | lineage2.2.1 | None | SRR1140941 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1169162 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167334 | MDR-TB | lineage4.4.1.1.1 | None | ERR9992992 | XDR-TB | lineage4.4.1.1.1 | None | ERR983252 | MDR-TB | lineage4.3.4.1 | None | ERR7737714 | MDR-TB | lineage4.4.1.1.1 | None | ERR13292232 | MDR-TB | lineage4.3.4.2 | None | SRR11349160 | MDR-TB | lineage4.4.1.1.1 | None | ERR9992624 | XDR-TB | lineage4.4.1.1.1 | None | SRR1184354 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR3148154 | MDR-TB | lineage4.1.1.3 | None | SRR29273941 | MDR-TB | lineage4.8 | None | ERR6865351 | RR-TB | lineage4.3.4.2 | None | SRR1019173 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR833134 | MDR-TB | lineage4.4.1.1.1 | None | SRR1019168 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1165211 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971067 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971340 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349210 | MDR-TB | lineage4.4.1.1.1 | None | ERR7737691 | MDR-TB | lineage4.4.1.1.1 | None | ERR11488427 | MDR-TB | lineage4.4.1.1.1 | None | ERR13264955 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR4796289 | MDR-TB | lineage3.1.2 | None | SRR1165676 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349161 | MDR-TB | lineage4.4.1.1.1 | None | SRR29273923 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13266597 | Pre-XDR-TB | lineage4.8 | None | SRR11349138 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971296 | MDR-TB | lineage4.8 | None | ERR13284829 | RR-TB | lineage4.8 | None | ERR13284987 | MDR-TB | lineage4.8 | None | SRR9971163 | MDR-TB | lineage4.4.1.1.1 | None | SRR21727571 | MDR-TB | lineage4.1.2.1 | None | SRR18002890 | MDR-TB | lineage4.4.2 | None | SRR18715163 | RR-TB | lineage4.8 | None | ERR1750880 | MDR-TB | lineage4.4.1.1.1 | zw | SRR1167272 | MDR-TB | lineage4.4.1.1.1 | None | ERR3148151 | MDR-TB | lineage4.1.1.3 | None | ERR4797720 | XDR-TB | lineage3 | in | SRR5338514 | MDR-TB | lineage1.2.1.2.1 | None | SRR9738557 | Pre-XDR-TB | lineage4.8 | None | SRR10315642 | MDR-TB | lineage4.4.1.1.1 | None | SRR11033736 | MDR-TB | lineage2.2.1 | None | SRR1167354 | MDR-TB | lineage4.4.1.1.1 | None | SRR28394069 | MDR-TB | lineage4.1.1 | None | ERR4798246 | Pre-XDR-TB | lineage4.8 | in | ERR10610070 | MDR-TB | lineage4.4.1.1.1 | None | ERR3148173 | MDR-TB | lineage4.1.1.3 | mx | ERR3148183 | MDR-TB | lineage4.1.1.3 | mx | ERR4796997 | MDR-TB | lineage3 | in | SRR1167293 | MDR-TB | lineage4.4.1.1.1 | None | SRR11662590 | MDR-TB | lineage2.2.1 | None | SRR1165687 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | SAMN02403564 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403544 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403548 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403552 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403543 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403551 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02585990 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02586023 | MDR-TB | lineage4.4.1.1.1 | za | SRR1169275 | MDR-TB | lineage4.4.1.1.1 | None | ERR11043463 | MDR-TB | lineage4.1.2.1 | None | SRR671845 | RR-TB | lineage2.2.1 | cn | SRR1165648 | MDR-TB | lineage4.4.1.1.1 | None | ERR983254 | MDR-TB | lineage4.3.4.1 | None | ERR11773722 | MDR-TB | lineage4.4.1.1.1 | None | SRR28393310 | MDR-TB | lineage4.1.1 | None | SRR28394204 | MDR-TB | lineage4.1.1 | None | ERR4811369 | MDR-TB | lineage4.5 | cn | ERR4831602 | MDR-TB | lineage2.1 | vn | ERR5897088 | Pre-XDR-TB | lineage3 | None | SRR1165702 | MDR-TB | lineage4.4.1.1.1 | None | ERR3273214 | MDR-TB | lineage4.1.2.1 | None | ERR7911285 | MDR-TB | lineage1.1.1.1 | vn | ERR4830525 | MDR-TB | lineage4.4.1.1.1 | za | ERR4829045 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4830798 | MDR-TB | lineage4.2.2.2 | et | ERR7911635 | Pre-XDR-TB | lineage2.2.1 | za | SRR6797646 | Pre-XDR-TB | lineage4.8 | None | SRR1169199 | MDR-TB | lineage4.4.1.1.1 | None | SRR1196785 | MDR-TB | lineage4.4.1.1.1 | None | ERR11488590 | MDR-TB | lineage4.4.1.1.1 | None | ERR8975003 | MDR-TB | lineage2.2.1;lineage4.4.1.1.1 | None | SRR10040514 | MDR-TB | lineage4.5 | None | SRR1196569 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR2516569 | MDR-TB | lineage4.3.3 | nl | ERR2516405 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR2516698 | Pre-XDR-TB | lineage4.1.2.1 | pe | SRR6824345 | MDR-TB | lineage2.2.1 | cn | SRR11828991 | Pre-XDR-TB | lineage2.1 | None | SRR16115035 | MDR-TB | lineage4.3.4.2 | None | SRR1169240 | MDR-TB | lineage4.4.1.1.1 | None | ERR4553844 | MDR-TB | lineage4.3.4.2 | None | ERR4829199 | MDR-TB | lineage4.1.2.1 | None | SRR1167312 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02350443 | MDR-TB | lineage4.4.1.1.1 | za | SRR847795 | MDR-TB | lineage4.4.1.1.1 | za | SRR847802 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02350480 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02350471 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02586025 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SRR6831770 | MDR-TB | lineage2.2.1 | None | SRR1167361 | MDR-TB | lineage4.4.1.1.1 | None | SRR15368789 | MDR-TB | lineage2.2.1 | None | ERR4024834 | RR-TB | lineage4.3.4.2 | None | SRR10040246 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02403507 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403524 | MDR-TB | lineage4.4.1.1.1 | za | SRR7585431 | Pre-XDR-TB | lineage3 | in | ERR2653123 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11082922 | MDR-TB | lineage4.8 | None | SRR11828977 | Pre-XDR-TB | lineage2.1 | th | SRR11828978 | Pre-XDR-TB | lineage2.1 | th | SRR11828979 | Pre-XDR-TB | lineage2.1 | th | SRR5709898 | Pre-XDR-TB | lineage2.1 | th | SRR6824346 | MDR-TB | lineage2.2.2 | cn | SRR6824582 | MDR-TB | lineage2.2.2 | cn | SRR10315725 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971275 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR28393357 | MDR-TB | lineage4.1.1 | None | ERR11775620 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173145 | MDR-TB | lineage4.4.1.1.1 | None | ERR11082700 | RR-TB | lineage4.8 | None | SRR1723486 | MDR-TB | lineage2.2.1 | None | SAMN02350484 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02350491 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02350489 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02350490 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02586054 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02585983 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02586001 | MDR-TB | lineage4.4.1.1.1 | za | ERR4828838 | MDR-TB | lineage4.1.2.1 | None | SRR21686600 | MDR-TB | lineage4.3.4.2 | None | SRR11349199 | MDR-TB | lineage4.4.1.1.1 | None | SAMN03246245 | MDR-TB | lineage2.2.1 | cn | SRR1167364 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315585 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315660 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172259 | MDR-TB | lineage4.4.1.1.1 | None | ERR4813123 | Pre-XDR-TB | lineage4.1.1 | None | SAMN02403518 | MDR-TB | lineage4.4.1.1.1 | za | SRR833030 | MDR-TB | lineage4.4.1.1.1 | None | SRR833119 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971360 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169160 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167357 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172365 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | ERR11775049 | MDR-TB | lineage4.4.1.1.1 | None | SRR28394037 | Pre-XDR-TB | lineage4.1.1 | None | SRR11662707 | MDR-TB | lineage2.2.1 | None | SRR1196528 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR21691144 | MDR-TB | lineage3 | None | ERR13286109 | MDR-TB | lineage4.4.1.1.1 | None | ERR13288980 | MDR-TB | lineage4.8 | None | ERR9993113 | XDR-TB | lineage4.4.1.1.1 | None | ERR2516047 | MDR-TB | lineage4.4.1.1.1 | za | SRR10315702 | MDR-TB | lineage4.4.1.1.1 | None | SRR18054802 | MDR-TB | lineage2.2.2 | None | SRR6256976 | Pre-XDR-TB | lineage4.2.1 | ru | SRR1169176 | MDR-TB | lineage4.4.1.1.1 | None | SRR16088478 | MDR-TB | lineage4.2.1 | None | ERR11488583 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1196570 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173087 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167393 | MDR-TB | lineage4.4.1.1.1 | None | ERR983253 | MDR-TB | lineage4.3.4.1 | None | ERR3014593 | Pre-XDR-TB | lineage4.3.1 | tn | SRR15014747 | MDR-TB | lineage4.2.2.2 | None | SRR1173855 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165651 | MDR-TB | lineage4.4.1.1.1 | None | ERR10680139 | RR-TB | lineage5.1.3 | None | ERR7737932 | MDR-TB | lineage4.4.1.1.1 | None | SRR1169287 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1175329 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167292 | MDR-TB | lineage4.4.1.1.1 | None | SRR1167339 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173300 | MDR-TB | lineage4.4.1.1.1 | None | SRR1168964 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165305 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315727 | MDR-TB | lineage4.4.1.1.1 | None | SRR6511611 | MDR-TB | lineage4.3.4.2 | None | ERR3273134 | MDR-TB | lineage4.1.2.1 | None | ERR3275874 | MDR-TB | lineage3 | nl | ERR13260226 | MDR-TB | lineage4.3.3 | None | SRR1172781 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR7765350 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1140926 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR13291080 | Pre-XDR-TB | lineage4.5 | None | ERR3639825 | MDR-TB | lineage4.4.1.1 | None | ERR13264948 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1169168 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | SRR6831995 | MDR-TB | lineage2.2.1 | None | SRR1169312 | HR-TB | lineage4.4.1.1.1 | None | SRR1169262 | HR-TB | lineage4.4.1.1.1 | None | ERR11049054 | MDR-TB | lineage1.2.2.1 | None | SRR29274039 | Pre-XDR-TB | lineage4.8 | None | SRR1184347 | MDR-TB | lineage4.4.1.1.1 | None | SRR10040416 | MDR-TB | lineage2.2.1 | None | SRR833139 | MDR-TB | lineage4.1.1.3 | None | SRR833109 | MDR-TB | lineage4.4.1.1.1 | None | SAMN01925684 | MDR-TB | lineage4.4.1.1.1 | None | SRR1140934 | MDR-TB | lineage4.4.1.1.1 | None | SRR29055648 | MDR-TB | lineage4.8.1 | None | ERR13261230 | Pre-XDR-TB | lineage4.3.3;lineage4.8 | None | SAMN02403547 | MDR-TB | lineage4.4.1.1.1 | None | ERR11082575 | MDR-TB | lineage2.2.2 | None | ERR9992637 | XDR-TB | lineage4.4.1.1.1 | None | SRR3085322 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288750 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR5897098 | Pre-XDR-TB | lineage3 | None | ERR13261228 | Pre-XDR-TB | lineage4.8 | None | ERR10748471 | MDR-TB | lineage4.4.1.1.1 | None | SRR21277858 | MDR-TB | lineage2.2.1 | None | SRR1019142 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1011479 | MDR-TB | lineage4.4.1.1.1 | None | SRR10430319 | MDR-TB | lineage4.3.3 | None | SRR29274152 | Pre-XDR-TB | lineage4.8 | None | SRR1165253 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349155 | MDR-TB | lineage4.4.1.1.1 | None | SRR1174832 | MDR-TB | lineage4.4.1.1.1 | None | SRR1184353 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172876 | MDR-TB | lineage4.4.1.1.1 | None | SRR833065 | MDR-TB | lineage4.1.1.3 | None | SRR29017170 | RR-TB | lineage3 | None | ERR2510527 | MDR-TB | lineage4.2.2.2 | pk | SRR29289201 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR6964501 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR5866026 | MDR-TB | lineage2.2.1 | None | SRR11348147 | MDR-TB | lineage4.3.4.2 | None | ERR4799653 | MDR-TB | lineage3 | in | ERR13260862 | XDR-TB | lineage4.4.1.1.1 | None | ERR4800568 | Pre-XDR-TB | lineage4.8 | in | SRR21887754 | MDR-TB | lineage4.5 | None | SRR833132 | MDR-TB | lineage4.4.1.1.1 | None | ERR4799687 | MDR-TB | lineage3 | in | SRR9971348 | MDR-TB | lineage4.4.1.1.1 | None | ERR4799666 | MDR-TB | lineage3.1.2 | in | SRR1172221 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342639 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403563 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403565 | MDR-TB | lineage4.4.1.1.1 | za | ERR7737941 | MDR-TB | lineage4.4.1.1.1 | None | SRR1166208 | Pre-XDR-TB | lineage4.8 | ro | SRR1172253 | MDR-TB | lineage4.4.1.1.1 | None | ERR760596 | MDR-TB | lineage4.1.2.1.1 | ar | SRR28394050 | MDR-TB | lineage4.1.1 | None | SRR1165623 | MDR-TB | lineage4.4.1.1.1 | None | SRR28393663 | MDR-TB | lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | None | ERR7911286 | MDR-TB | lineage1.1.1.1 | vn | ERR7162975 | MDR-TB | lineage2.2.1 | None | ERR7911210 | MDR-TB | lineage4.4.1.1.1 | za | ERR4830517 | MDR-TB | lineage4.4.1.1.1 | za | ERR4830533 | MDR-TB | lineage4.4.1.1.1 | za | SRR13232626 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062850 | MDR-TB | lineage4.4.1.1.1 | None | SRR11662697 | Pre-XDR-TB | lineage2.2.1.1;lineage4.2.2 | None | SRR1167365 | MDR-TB | lineage4.3.4.2.1;lineage4.4.1.1.1 | None | SRR833135 | MDR-TB | lineage4.4.1.1.1 | None | ERR108420 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3170414 | MDR-TB | lineage5.1 | gh | ERR2516724 | MDR-TB | lineage4.1.1 | pe | ERR2516597 | XDR-TB | lineage4.1.2.1 | pe | ERR2516499 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2516713 | MDR-TB | lineage4.1.1 | pe | SRR5709897 | Pre-XDR-TB | lineage2.1 | th | SRR5709883 | Pre-XDR-TB | lineage2.1 | th | ERR2041693 | MDR-TB | lineage4.1.2.1 | rs | SRR1165703 | MDR-TB | lineage4.4.1.1.1 | None | SRR1165650 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173102 | HR-TB | lineage4.4.1.1.1 | None | SRR1175337 | MDR-TB | lineage4.4.1.1.1 | None | SRR10040232 | MDR-TB | lineage2.2.1 | None | ERR13289018 | MDR-TB | lineage2.2.1 | None | SAMN02053775 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02053778 | MDR-TB | lineage4.1.1.3 | za | SAMN02053790 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02053797 | MDR-TB | lineage4.4.1.1.1 | za | SRR23310921 | MDR-TB | lineage2.2.1 | None | SRR11349156 | MDR-TB | lineage4.4.1.1.1 | None | SRR1196580 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR833148 | MDR-TB | lineage4.4.1.1.1 | None | SAMN02403466 | MDR-TB | lineage4.4.1.1.1 | za | ERR9993258 | XDR-TB | lineage4.4.1.1.1 | None | SAMN02403502 | MDR-TB | lineage4.4.1.1.1 | za | SAMN02403503 | MDR-TB | lineage4.4.1.1.1 | za | SRR1140929 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SAMN02403519 | MDR-TB | lineage4.4.1.1.1 | za | ERR11466405 | MDR-TB | lineage4.4.1.1.1 | None | SRR1140957 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1165619 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173270 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR25515360 | Pre-XDR-TB | lineage4.5 | None | ERR3273203 | MDR-TB | lineage4.1.2.1 | None |
|---|
