lineage | Count |
---|---|
lineage2.2.1 | 2 |
44 | |
lineage4.9 | 5 |
lineage4.1.2.1 | 1 |
lineage2 | 1 |
lineage4.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR4828288 | HR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | ERR502532 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR5311090 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283017 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3994112 | Sensitive | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797069 | Other | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR8976043 | HR-TB | None | ERR6358837 | HR-TB | None | SRR13861552 | Sensitive | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR1640750 | HR-TB | None | SRR15368973 | Other | None | SRR3675465 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR19304036 | HR-TB | None | SRR3675311 | Other | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR2027278 | Sensitive | lineage1.1.1.1 | None | SRR3675558 | HR-TB | None | SRR5341470 | HR-TB | None | SRR5007188 | Other | lineage4 | None | SRR6325442 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046397 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None |
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