Rv0678 - c.198dupG


Drug resistance types
0 Sensitive 6 RR-TB 19 HR-TB 141 MDR-TB 17 Pre-XDR-TB 175 XDR-TB 52 Other
lineage Counts
lineage Count
lineage4 142
lineage2.2.2 25
lineage4.3.3 17
lineage2.2.1 108
lineage4.8 3
lineage3 10
lineage4.9 39
lineage2.2.1;lineage3.1.2 1
lineage4.3.4.2 2
lineage4.4.1.1 8
lineage1.2.2.2 8
lineage4.1 2
lineage1.2.2.2;lineage2.2.1 1
lineage1.1.1 1
lineage2.2.1.1 3
lineage4.2.1 4
lineage4.3.2.1 2
lineage3;lineage4.5 1
lineage2.2.1;lineage4.3.3 3
lineage4.1.1.1 1
lineage2.2.1.2 2
lineage4.4.2 2
lineage4.1.1.3 11
lineage2.2.1;lineage3 2
lineage1.1.2;lineage2.2.1;lineage3.1.2.1 1
lineage4.3.4.1 1
lineage4.1.2.1 3
lineage3.1.2 1
lineage3.1.2.1 1
lineage1.1.2;lineage2.2.1 1
lineage1.1.2 2
lineage4.5 1
lineage2.2.1.1;lineage3 1
spoligotype Counts
spoligotype Count
None 410
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4813549 MDR-TB lineage4 None
ERR9993198 XDR-TB lineage2.2.2 None
ERR4178215 HR-TB lineage4 None
ERR9992647 XDR-TB lineage4.3.3 None
ERR4797406 XDR-TB lineage2.2.1 in
ERR4024541 HR-TB lineage4 None
SRR18714869 Other lineage4.8 None
ERR2516794 MDR-TB lineage3 gb
ERR2229151 Other lineage4.8 dk
ERR7910890 MDR-TB lineage4 None
ERR751447 MDR-TB lineage4 pe
SRR11871436 XDR-TB lineage2.2.1 None
ERR5979658 Other lineage4.9 None
ERR2516521 MDR-TB lineage4 nl
SRR22175239 XDR-TB lineage2.2.1;lineage3.1.2 None
ERR8975704 XDR-TB lineage2.2.2 None
SRR25827700 XDR-TB lineage2.2.1 None
ERR9992871 XDR-TB lineage4.3.3 None
ERR4798677 XDR-TB lineage2.2.1 in
ERR4809177 XDR-TB lineage2.2.1 za
SRR28393997 Pre-XDR-TB lineage4.3.4.2 None
ERR11773813 XDR-TB lineage2.2.1 None
ERR9993195 XDR-TB lineage2.2.2 None
ERR9992749 XDR-TB lineage4.4.1.1 None
ERR9992874 XDR-TB lineage1.2.2.2 None
ERR11068626 MDR-TB lineage2.2.1 None
SRR29093859 XDR-TB lineage2.2.2 None
ERR751465 MDR-TB lineage4 pe
SRR13232624 XDR-TB lineage2.2.1 None
ERR13260858 MDR-TB lineage4.4.1.1 None
ERR3287360 MDR-TB lineage4 pe
SRR28393954 MDR-TB lineage4 None
SRR28393801 MDR-TB lineage4 None
SRR5710023 XDR-TB lineage2.2.1 th
ERR7339051 MDR-TB lineage4 None
ERR4457819 HR-TB lineage4 None
ERR5979749 Other lineage4.9 None
ERR5979578 Other lineage4.9 None
SRR16295773 Other lineage2.2.1 None
ERR8975670 Other lineage4.1 None
SRR28394044 MDR-TB lineage4 None
SRR28393572 MDR-TB lineage4 None
ERR9992898 XDR-TB lineage1.2.2.2;lineage2.2.1 None
SRR12142393 Other lineage2.2.1 None
ERR4024944 MDR-TB lineage4 None
ERR13260461 XDR-TB lineage2.2.1 None
ERR4813306 MDR-TB lineage4 pe
ERR4810898 XDR-TB lineage2.2.1 cn
SRR16295804 Other lineage2.2.1 None
ERR2510596 RR-TB lineage3 pk
SRR23311000 XDR-TB lineage2.2.1 None
ERR4872344 XDR-TB lineage2.2.1 None
ERR7910889 MDR-TB lineage4 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR5979584 Other lineage4.9 None
SRR5709755 XDR-TB lineage1.1.1 th
ERR5979666 Other lineage4.9 None
ERR4831534 XDR-TB lineage2.2.2 None
SRR29289206 MDR-TB lineage4.9 None
ERR5979577 Other lineage4.9 None
ERR4797378 XDR-TB lineage2.2.1.1 in
ERR9993155 XDR-TB lineage2.2.1 None
SRR2024984 MDR-TB lineage2.2.1 cn
SRR28351398 XDR-TB lineage4.2.1 None
ERR11774908 XDR-TB lineage2.2.1 None
ERR12916923 XDR-TB lineage4.3.3 None
SRR28393361 MDR-TB lineage4 None
SRR29289259 RR-TB lineage3 None
SRR29289354 XDR-TB lineage3 None
SRR28393265 MDR-TB lineage4 None
SRR28394268 MDR-TB lineage4 None
SRR28351318 XDR-TB lineage4.2.1 None
ERR11774959 XDR-TB lineage2.2.1 None
ERR5979744 Other lineage4.9 None
SRR28393529 MDR-TB lineage4 None
SRR28394278 MDR-TB lineage4 None
SRR24710119 MDR-TB lineage2.2.1 None
ERR13260439 Pre-XDR-TB lineage4 None
ERR775307 HR-TB lineage4 pe
SRR16295816 Other lineage2.2.1 None
ERR4812485 Pre-XDR-TB lineage4 pe
ERR9992903 XDR-TB lineage4.3.2.1 None
ERR12916914 XDR-TB lineage2.2.1 None
ERR9993183 XDR-TB lineage2.2.2 None
ERR4178287 MDR-TB lineage4 None
ERR3287443 MDR-TB lineage4 pe
ERR4872296 XDR-TB lineage2.2.1 None
ERR751356 MDR-TB lineage4 pe
ERR8975667 XDR-TB lineage2.2.2 None
ERR3276299 XDR-TB lineage2.2.1 None
ERR3276298 XDR-TB lineage2.2.1 None
SRR11871440 XDR-TB lineage2.2.1 None
SRR29289420 XDR-TB lineage3 None
ERR12916927 XDR-TB lineage4.3.3 None
SRR28706473 XDR-TB lineage2.2.1 None
ERR1034755 MDR-TB lineage4 pe
ERR4813828 XDR-TB lineage4.3.3 None
ERR4025071 MDR-TB lineage4 None
SAMEA5569751 MDR-TB lineage4 None
ERR9992635 XDR-TB lineage4.3.3 None
ERR5979581 Other lineage4.9 None
ERR5979575 Other lineage4.9 None
ERR12916913 XDR-TB lineage4.3.3 None
SAMEA5569642 Pre-XDR-TB lineage4 None
SRR29093754 XDR-TB lineage2.2.1 None
ERR11488873 RR-TB lineage4.9 None
ERR13260344 MDR-TB lineage4 None
ERR751488 MDR-TB lineage4 pe
SRR29093491 XDR-TB lineage2.2.2 None
SRR1163300 MDR-TB lineage4 None
ERR751414 MDR-TB lineage4 None
ERR13288925 XDR-TB lineage2.2.2 None
ERR4812060 HR-TB lineage4 pe
SRR14807466 XDR-TB lineage2.2.1 None
ERR13260512 MDR-TB lineage4 None
ERR5979576 Other lineage4.9 None
ERR4829960 MDR-TB lineage3;lineage4.5 pk
ERR8975920 XDR-TB lineage2.2.2 None
ERR11082091 MDR-TB lineage4 None
ERR5979679 Other lineage4.9 None
SRR16295756 Other lineage2.2.1 None
ERR8665616 XDR-TB lineage2.2.1 None
ERR3287744 HR-TB lineage4 pe
ERR9029360 MDR-TB lineage2.2.1 None
ERR9029844 MDR-TB lineage4 None
ERR5979616 Other lineage4.9 None
ERR4457924 MDR-TB lineage4 None
ERR10112854 XDR-TB lineage2.2.1 None
ERR8665694 XDR-TB lineage2.2.1;lineage4.3.3 None
ERR12916922 XDR-TB lineage2.2.1 None
ERR9992851 XDR-TB lineage4.1.1.1 None
SRR29289395 XDR-TB lineage3 None
SRR15217980 HR-TB lineage4 None
ERR5979574 Other lineage4.9 None
SRR1163141 MDR-TB lineage4 None
SRR17657988 Other lineage2.2.1.2 None
SRR6824484 XDR-TB lineage4.4.2 cn
ERR3287721 MDR-TB lineage4 pe
ERR12117938 MDR-TB lineage4 None
ERR4457805 MDR-TB lineage4 None
SRR1140898 MDR-TB lineage2.2.1 None
ERR9992839 XDR-TB lineage4.1.1.3 None
ERR4811872 HR-TB lineage4 pe
ERR5979686 Other lineage4.9 None
ERR779883 MDR-TB lineage4 pe
ERR9993087 XDR-TB lineage4.1.1.3 None
SRR16295779 Other lineage2.2.1 None
ERR9992897 XDR-TB lineage1.2.2.2 None
SRR16087881 XDR-TB lineage2.2.1 None
SRR16087913 XDR-TB lineage2.2.1 None
SRR16088206 XDR-TB lineage2.2.1 None
ERR2516458 MDR-TB lineage4 pe
ERR3287449 Pre-XDR-TB lineage4 None
SRR16295762 Other lineage2.2.1 None
ERR3287696 MDR-TB lineage4 pe
ERR9993109 Other lineage2.2.1 None
ERR775319 HR-TB lineage4 pe
SRR29289253 XDR-TB lineage3 None
ERR4457843 MDR-TB lineage4 None
SRR17657989 Other lineage2.2.1.2 None
SRR25827856 MDR-TB lineage2.2.1;lineage3 None
ERR4799796 XDR-TB lineage4.8 in
SRR14807481 XDR-TB lineage2.2.1 None
ERR9992935 XDR-TB lineage1.2.2.2 None
ERR8975682 XDR-TB lineage4.3.3 None
ERR3287557 MDR-TB lineage4 None
ERR7339052 MDR-TB lineage4 None
ERR5917992 XDR-TB lineage2.2.2 za
ERR5979677 Other lineage4.9 None
SRR14801756 MDR-TB lineage2.2.1 None
ERR9993222 XDR-TB lineage2.2.1 None
SRR24255938 XDR-TB lineage2.2.1 None
ERR11044575 MDR-TB lineage2.2.1 None
ERR4025041 MDR-TB lineage4 None
ERR12118009 MDR-TB lineage4 None
ERR1034737 MDR-TB lineage4 pe
ERR9992937 XDR-TB lineage4.4.1.1 None
SRR1019146 MDR-TB lineage2.2.1 None
ERR5979701 Other lineage4.9 None
ERR9993020 XDR-TB lineage4.3.3 None
SRR28394078 MDR-TB lineage4 None
ERR7975629 XDR-TB lineage2.2.1 None
ERR5979696 Other lineage4.9 None
SRR12420386 MDR-TB lineage2.2.1 None
ERR2516541 Pre-XDR-TB lineage4 pe
SRR11871447 XDR-TB lineage2.2.1 None
ERR7737921 MDR-TB lineage4.3.3 None
ERR9807016 XDR-TB lineage2.2.2 None
SRR28434979 XDR-TB lineage2.2.1 None
SRR28888056 XDR-TB lineage2.2.1 None
SRR28394070 Pre-XDR-TB lineage4 None
SRR28393551 Pre-XDR-TB lineage4 None
SRR25827489 XDR-TB lineage1.1.2;lineage2.2.1;lineage3.1.2.1 None
SRR28498365 XDR-TB lineage4.2.1 None
SRR28393600 Pre-XDR-TB lineage4 None
SRR28393306 MDR-TB lineage4 None
SRR28394271 Pre-XDR-TB lineage4 None
ERR12916928 XDR-TB lineage4.3.3 None
ERR3287473 HR-TB lineage4 pe
ERR751521 MDR-TB lineage4 pe
SRR29539785 XDR-TB lineage2.2.1 None
ERR9993101 XDR-TB lineage2.2.1 None
ERR9993120 XDR-TB lineage4.3.3 None
ERR9992710 XDR-TB lineage2.2.1 None
ERR9992870 XDR-TB lineage2.2.1 None
ERR9992929 XDR-TB lineage4.1.1.3 None
ERR9992791 XDR-TB lineage4.3.3 None
SRR26397809 XDR-TB lineage4.3.4.1 None
ERR3287536 MDR-TB lineage4 None
SRR29094000 XDR-TB lineage2.2.1 None
SRR29096336 XDR-TB lineage2.2.2 None
SRR28393369 MDR-TB lineage4 None
SRR28393599 MDR-TB lineage4 None
SRR16088543 XDR-TB lineage2.2.1 None
SRR28351573 XDR-TB lineage2.2.1 None
ERR5979583 Other lineage4.9 None
SRR28393689 MDR-TB lineage4 None
SRR29539011 MDR-TB lineage2.2.1 None
SRR16295771 Other lineage2.2.1 None
SRR13870364 Pre-XDR-TB lineage4 None
ERR10748106 XDR-TB lineage2.2.1 None
SRR22048313 XDR-TB lineage4.1.2.1 None
ERR751526 MDR-TB lineage4 pe
ERR8665615 XDR-TB lineage2.2.1 None
ERR13259984 XDR-TB lineage4.4.2 None
ERR2516503 Pre-XDR-TB lineage4 pe
ERR5979676 Other lineage4.9 None
ERR9993159 XDR-TB lineage2.2.2 None
ERR751452 Pre-XDR-TB lineage4 pe
ERR4798942 XDR-TB lineage3.1.2 in
ERR3335725 RR-TB lineage3 pk
ERR5979654 Other lineage4.9 None
ERR13260301 MDR-TB lineage4 None
ERR9992973 XDR-TB lineage2.2.1 None
ERR4813495 HR-TB lineage4 None
ERR8025441 XDR-TB lineage2.2.2 None
ERR2510175 MDR-TB lineage4 pe
SRR28394269 MDR-TB lineage4 None
ERR8665695 XDR-TB lineage2.2.1;lineage4.3.3 None
ERR9992797 XDR-TB lineage2.2.2 None
ERR9993200 XDR-TB lineage2.2.2 None
SRR28393848 MDR-TB lineage4 None
ERR13260240 MDR-TB lineage4 None
ERR12916915 XDR-TB lineage4.3.3 None
ERR11774909 XDR-TB lineage2.2.1 None
ERR11044180 XDR-TB lineage2.2.1 None
ERR3287864 MDR-TB lineage4 pe
SRR28394190 MDR-TB lineage4 None
ERR9992993 HR-TB lineage2.2.1 None
ERR9993223 XDR-TB lineage2.2.1.1 None
ERR9993231 XDR-TB lineage2.2.1 None
ERR751531 MDR-TB lineage4 pe
ERR751478 MDR-TB lineage4 pe
SRR28858605 MDR-TB lineage4 None
ERR4011117 XDR-TB lineage2.2.2 None
SRR22175193 XDR-TB lineage2.2.1 None
ERR4813333 MDR-TB lineage4 None
SRR16295776 Other lineage2.2.1 None
ERR775364 MDR-TB lineage4 pe
ERR9992762 XDR-TB lineage4.1.1.3 None
ERR8975018 XDR-TB lineage4.3.3 None
ERR751411 MDR-TB lineage4 pe
ERR9993056 XDR-TB lineage1.2.2.2 None
SRR28394212 MDR-TB lineage4 None
ERR4800701 XDR-TB lineage3.1.2.1 None
ERR13260497 MDR-TB lineage4.9 None
ERR4812681 MDR-TB lineage4 pe
SRR16295824 Other lineage2.2.1 None
ERR3287445 MDR-TB lineage4 pe
SRR22175187 XDR-TB lineage1.1.2;lineage2.2.1 None
ERR9992939 XDR-TB lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
ERR9992746 XDR-TB lineage4.1.1.3 None
SRR24256213 Other lineage4.1 None
ERR11773765 XDR-TB lineage2.2.1 None
SRR19295646 MDR-TB lineage1.1.2 None
SRR25827435 XDR-TB lineage2.2.1.1 None
SRR25827400 HR-TB lineage3 None
ERR4831122 MDR-TB lineage2.2.1 de
ERR13289281 XDR-TB lineage4.1.1.3 None
ERR4812772 MDR-TB lineage4 pe
ERR12117965 MDR-TB lineage4 None
ERR4813571 XDR-TB lineage2.2.1 None
ERR4457811 MDR-TB lineage4 None
ERR751540 MDR-TB lineage4 pe
ERR12916920 XDR-TB lineage2.2.1 None
ERR11068476 MDR-TB lineage4.1.2.1 None
SRR28394232 MDR-TB lineage4 None
ERR5979690 Other lineage4.9 None
SRR5184989 XDR-TB lineage2.2.1 None
SRR29289376 MDR-TB lineage3 None
ERR13260151 MDR-TB lineage4 None
ERR2707155 MDR-TB lineage4.9 cd
ERR13289386 XDR-TB lineage4.4.1.1 None
ERR2516414 MDR-TB lineage4 pe
SRR25827504 MDR-TB lineage2.2.1;lineage3 None
ERR2516472 MDR-TB lineage4 pe
ERR2179776 HR-TB lineage4.5 cn
ERR3287791 MDR-TB lineage4 pe
ERR9029870 MDR-TB lineage4 None
ERR5979580 Other lineage4.9 None
SRR28240002 XDR-TB lineage4.3.3 None
ERR9992928 XDR-TB lineage1.2.2.2 None
ERR10748155 XDR-TB lineage2.2.1 None
ERR9992648 XDR-TB lineage4.3.2.1 None
ERR10748140 XDR-TB lineage2.2.1 None
ERR7911660 XDR-TB lineage2.2.2 za
SRR13232759 XDR-TB lineage2.2.1;lineage4.3.3 None
SRR11871423 HR-TB lineage2.2.1 None
ERR5979693 Other lineage4.9 None
SRR28393626 MDR-TB lineage4 None
ERR13260594 MDR-TB lineage4 None
SRR29538981 XDR-TB lineage2.2.1 None
ERR4457861 MDR-TB lineage4 None
ERR9993054 XDR-TB lineage4.1.1.3 None
ERR5979684 Other lineage4.9 None
ERR4829977 RR-TB lineage2.2.1.1;lineage3 pk
ERR13288979 XDR-TB lineage1.2.2.2 None
SRR28393901 MDR-TB lineage4 None
ERR9993213 MDR-TB lineage2.2.1 None
SRR28498448 XDR-TB lineage4.2.1 None
SRR28393349 MDR-TB lineage4 None
SRR28393423 MDR-TB lineage4 None
ERR12916924 XDR-TB lineage2.2.1 None
ERR9993208 XDR-TB lineage4.1.1.3 None
SRR29289388 XDR-TB lineage4.9 None
ERR5979582 Other lineage4.9 None
ERR2516667 MDR-TB lineage4 pe
ERR751620 Pre-XDR-TB lineage4 pe
ERR3287846 Pre-XDR-TB lineage4 pe
ERR3287735 MDR-TB lineage4 pe
ERR13288845 XDR-TB lineage2.2.2 None
SRR29539321 XDR-TB lineage2.2.1 None
SRR29539594 XDR-TB lineage2.2.1 None
ERR4831543 XDR-TB lineage2.2.2 None
ERR3287505 MDR-TB lineage4 None
ERR3287558 MDR-TB lineage4 None
SRR17234892 MDR-TB lineage4 None
ERR1034756 HR-TB lineage4 pe
SRR25827704 XDR-TB lineage2.2.1 None
ERR4457792 HR-TB lineage4 None
ERR8975008 XDR-TB lineage2.2.1 None
ERR9029867 Pre-XDR-TB lineage4 None
SRR28393624 MDR-TB lineage4 None
ERR13261893 MDR-TB lineage4 None
ERR5979649 Other lineage4.9 None
ERR13289277 XDR-TB lineage2.2.1 None
ERR11774911 XDR-TB lineage2.2.1 None
ERR4457776 MDR-TB lineage4 None
ERR11774913 XDR-TB lineage2.2.1 None
ERR13261333 XDR-TB lineage4.3.4.2 None
ERR2516548 MDR-TB lineage4 pe
ERR2516650 Pre-XDR-TB lineage4 pe
ERR13276300 MDR-TB lineage2.2.1 None
ERR13260902 XDR-TB lineage1.2.2.2 None
ERR5979579 Other lineage4.9 None
ERR5979585 Other lineage4.9 None
ERR5979586 Other lineage4.9 None
ERR5979678 Other lineage4.9 None
ERR5979685 Other lineage4.9 None
ERR9992811 XDR-TB lineage2.2.2 None
ERR9992888 XDR-TB lineage4.4.1.1 None
ERR4813603 MDR-TB lineage4 None
SRR28393378 MDR-TB lineage4 None
ERR13191364 MDR-TB lineage2.2.1 None
SAMEA5569750 MDR-TB lineage4 None
ERR9992974 XDR-TB lineage4.1.1.3 None
ERR2515458 MDR-TB lineage2.2.1 za
ERR2516678 MDR-TB lineage4 pe
ERR3287597 MDR-TB lineage4 pe
ERR4799448 XDR-TB lineage2.2.1 in
ERR9992918 XDR-TB lineage4.4.1.1 None
SRR29096450 XDR-TB lineage2.2.1 None
ERR5979655 Other lineage4.9 None
ERR4813115 MDR-TB lineage4 None
ERR9993036 RR-TB lineage2.2.1 None
ERR9992652 XDR-TB lineage2.2.1 None
ERR4812883 MDR-TB lineage4.9 pe
ERR13284322 MDR-TB lineage4 None
ERR4811935 HR-TB lineage4 pe
ERR2516509 MDR-TB lineage4 pe
SRR28393318 MDR-TB lineage4 None
ERR775321 MDR-TB lineage4 pe
ERR4800138 Other lineage1.1.2 None
ERR5979662 Other lineage4.9 None
SRR27069367 XDR-TB lineage2.2.1 None
ERR8975764 XDR-TB lineage4.4.1.1 None
SRR28394260 MDR-TB lineage4 None
SRR13243565 XDR-TB lineage2.2.1 None
ERR11081428 MDR-TB lineage2.2.1 None
ERR8975648 XDR-TB lineage2.2.1 None
ERR8975781 XDR-TB lineage4.1.1.3 None
ERR10748485 XDR-TB lineage4.1.1.3 None
ERR9992853 XDR-TB lineage2.2.2 None
ERR4796328 XDR-TB lineage2.2.1 in
ERR9992812 XDR-TB lineage2.2.2 None
ERR13288936 XDR-TB lineage2.2.1 None
ERR4457925 MDR-TB lineage4 None
ERR9993042 XDR-TB lineage1.2.2.2 None
ERR3287527 MDR-TB lineage4 None
ERR4813465 HR-TB lineage4 pe
SRR13243567 XDR-TB lineage2.2.1 None
ERR13260390 MDR-TB lineage4.1.2.1 None
ERR10748132 XDR-TB lineage4.4.1.1 None
ERR2510234 MDR-TB lineage4 pe
ERR8975656 XDR-TB lineage2.2.2 None
ERR4797408 XDR-TB lineage2.2.1 in
ERR3287555 MDR-TB lineage4 None
ERR4457827 MDR-TB lineage4 None
SRR10397187 XDR-TB lineage2.2.1 None