lineage | Count |
---|---|
lineage2.2.2 | 54 |
lineage2.2.1 | 72 |
lineage3 | 62 |
La3;lineage2.2.2 | 1 |
lineage2.2.1.1 | 5 |
lineage4.2.2.2 | 23 |
lineage3;lineage4 | 3 |
lineage3.1 | 6 |
lineage3.1.2 | 4 |
lineage4.2.1 | 2 |
lineage4.1.2.1 | 11 |
lineage2.1 | 1 |
lineage4.3.2 | 2 |
lineage4.8 | 5 |
lineage1.1.2 | 1 |
lineage4.4.2 | 3 |
lineage2.2.1;lineage4.4.2 | 1 |
lineage1.1.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage3.1.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.1.1.1 | 1 |
lineage4.6.3 | 1 |
spoligotype | Count |
---|---|
None | 263 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR26112807 | Sensitive | lineage2.2.2 | None |
SRR15315780 | Sensitive | lineage2.2.1 | None |
SRR6824633 | MDR-TB | lineage2.2.1 | cn |
ERR11044466 | Sensitive | lineage3 | None |
SRR1049029 | Pre-XDR-TB | lineage2.2.2 | None |
SRR13423593 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29093926 | MDR-TB | lineage2.2.2 | None |
ERR13258497 | MDR-TB | lineage2.2.1 | None |
SRR21722060 | Sensitive | lineage2.2.1 | None |
DRR130156 | MDR-TB | lineage2.2.1 | None |
SRR29093099 | MDR-TB | La3;lineage2.2.2 | None |
ERR9285892 | Sensitive | lineage3 | None |
SRR30182850 | Sensitive | lineage2.2.1 | None |
ERR13267372 | Sensitive | lineage2.2.1 | None |
ERR13285554 | Sensitive | lineage3 | None |
ERR13289957 | Sensitive | lineage3 | None |
SAMN02360555 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR1144737 | Pre-XDR-TB | lineage2.2.2 | None |
ERR5979455 | Sensitive | lineage3 | None |
SRR1013552 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13290974 | HR-TB | lineage2.2.1 | None |
ERR4799208 | Pre-XDR-TB | lineage2.2.1.1 | in |
ERR13230057 | Other | lineage2.2.2 | None |
SRR25207213 | MDR-TB | lineage2.2.1 | None |
SRR30182758 | Sensitive | lineage2.2.1 | None |
ERR4820811 | Sensitive | lineage3 | gb |
SRR26056445 | Sensitive | lineage3 | None |
SRR29231257 | Sensitive | lineage3 | None |
SAMN02360596 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR25534143 | Sensitive | lineage2.2.1 | None |
SRR21677625 | MDR-TB | lineage2.2.2 | None |
ERR9285858 | Sensitive | lineage3 | None |
SRR29440812 | Sensitive | lineage3 | None |
ERR2514923 | Sensitive | lineage3 | gb |
ERR2446183 | MDR-TB | lineage4.2.2.2 | nl |
ERR13273034 | Sensitive | lineage3 | None |
ERR2512421 | Other | lineage3;lineage4 | gb |
ERR4811632 | Sensitive | lineage2.2.1 | None |
SRR30182445 | Sensitive | lineage2.2.1 | None |
ERR4810968 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR29440798 | Sensitive | lineage2.2.1 | None |
SRR29440917 | Sensitive | lineage3 | None |
ERR987742 | HR-TB | lineage3 | None |
SRR29440647 | Sensitive | lineage3 | None |
SRR24222952 | MDR-TB | lineage2.2.1 | None |
SRR20969582 | Sensitive | lineage2.2.1 | None |
SRR12882266 | Sensitive | lineage3 | None |
SRR9971304 | Sensitive | lineage2.2.1 | None |
ERR4814896 | Other | lineage2.2.1.1 | None |
ERR13191065 | MDR-TB | lineage2.2.2 | None |
ERR13191369 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13191098 | MDR-TB | lineage2.2.2 | None |
ERR13296451 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13296461 | MDR-TB | lineage2.2.2 | None |
SRR29053198 | Sensitive | lineage2.2.2 | None |
SRR29093950 | Pre-XDR-TB | lineage2.2.2 | None |
ERR9286107 | Sensitive | lineage3 | None |
SRR1049059 | Pre-XDR-TB | lineage2.2.2 | None |
ERR11775824 | Sensitive | lineage3 | None |
ERR4822610 | Pre-XDR-TB | lineage3.1 | de |
ERR4011971 | MDR-TB | lineage4.2.2.2 | None |
ERR7737654 | MDR-TB | lineage4.2.2.2 | None |
SRR6785496 | MDR-TB | lineage2.2.1 | None |
ERR400541 | Sensitive | lineage3 | gb |
SRR2100044 | Sensitive | lineage3 | None |
SRR2100398 | RR-TB | lineage3.1.2 | None |
SRR2100445 | Sensitive | lineage3 | None |
SRR14801420 | MDR-TB | lineage4.2.1 | None |
SRR1723539 | MDR-TB | lineage2.2.1 | None |
ERR11082972 | Sensitive | lineage3 | None |
DRR474022 | Sensitive | lineage2.2.2 | None |
SRR29093380 | Pre-XDR-TB | lineage2.2.2 | None |
SRR29096251 | Sensitive | lineage3 | None |
SRR13423563 | MDR-TB | lineage2.2.1 | None |
ERR4830805 | MDR-TB | lineage4.2.2.2 | et |
ERR4830822 | Pre-XDR-TB | lineage4.2.2.2 | et |
ERR11050495 | Sensitive | lineage3 | None |
ERR228213 | Other | lineage3;lineage4 | None |
SRR1013632 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4799143 | Other | lineage3 | None |
SRR10315558 | Sensitive | lineage2.2.1 | None |
ERR117671 | RR-TB | lineage3.1.2 | None |
ERR4830799 | MDR-TB | lineage4.2.2.2 | et |
SRR15316200 | Sensitive | lineage2.2.1 | None |
SRR1165366 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR4800307 | Sensitive | lineage3 | in |
ERR4822606 | Pre-XDR-TB | lineage3.1 | de |
SRR1173856 | Sensitive | lineage3 | None |
ERR2513685 | Sensitive | lineage3 | gb |
ERR2517213 | Sensitive | lineage4.1.2.1 | nl |
SRR10040230 | MDR-TB | lineage2.1 | None |
ERR867564 | Sensitive | lineage3 | None |
SAMN02398699 | Pre-XDR-TB | lineage2.2.2 | kr |
DRR473915 | HR-TB | lineage2.2.2 | None |
SRR10040431 | MDR-TB | lineage2.2.1 | None |
SRR16088059 | Pre-XDR-TB | lineage2.2.1 | None |
ERR6866729 | Sensitive | lineage2.2.1 | None |
ERR108171 | Sensitive | lineage2.2.1.1 | za |
SRR11972427 | Pre-XDR-TB | lineage2.2.1 | None |
SRR29096626 | MDR-TB | lineage4.2.2.2 | None |
SRR21576602 | RR-TB | lineage2.2.1 | None |
SRR29096957 | Sensitive | lineage3;lineage4 | None |
ERR13292130 | Sensitive | lineage2.2.1 | None |
SRR30182764 | Sensitive | lineage2.2.1 | None |
ERR13276335 | Pre-XDR-TB | lineage3.1 | None |
SAMN03246349 | MDR-TB | lineage2.2.1 | cn |
SRR29096523 | MDR-TB | lineage4.2.2.2 | None |
ERR13290601 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR29231468 | Sensitive | lineage3 | None |
SRR19428570 | Other | lineage3 | None |
SRR1013631 | Pre-XDR-TB | lineage2.2.2 | None |
ERR2516481 | Sensitive | lineage4.3.2 | pe |
SRR5710016 | Pre-XDR-TB | lineage2.2.1.1 | th |
ERR9285857 | Sensitive | lineage3 | None |
DRR474026 | Sensitive | lineage2.2.2 | None |
SRR1049058 | Pre-XDR-TB | lineage2.2.2 | None |
SRR7069030 | Other | lineage3 | None |
ERR4830830 | Pre-XDR-TB | lineage4.2.2.2 | et |
ERR9285901 | Sensitive | lineage3 | None |
SRR29096953 | Sensitive | lineage3 | None |
ERR13246313 | Sensitive | lineage2.2.1 | None |
SRR26112061 | Sensitive | lineage2.2.1 | None |
SRR7654036 | Sensitive | lineage4.8 | None |
ERR13194006 | MDR-TB | lineage2.2.2 | None |
SRR1013663 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1048851 | Pre-XDR-TB | lineage2.2.2 | None |
SRR27069422 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6824475 | MDR-TB | lineage2.2.1 | cn |
ERR13290599 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR2517569 | MDR-TB | lineage4.2.2.2 | nl |
ERR3275336 | MDR-TB | lineage4.2.2.2 | nl |
ERR4830845 | MDR-TB | lineage4.2.2.2 | et |
SRR28859717 | Sensitive | lineage2.2.2 | None |
SRR12142414 | MDR-TB | lineage2.2.1 | None |
SRR7069467 | Sensitive | lineage3 | None |
SRR28860110 | Sensitive | lineage2.2.2 | None |
ERR4815826 | Sensitive | lineage3 | gb |
ERR4830803 | Pre-XDR-TB | lineage4.2.2.2 | et |
ERR2446350 | Sensitive | lineage4.1.2.1 | nl |
ERR2446178 | Sensitive | lineage4.1.2.1 | nl |
ERR13290598 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR4195747 | Sensitive | lineage4.1.2.1 | None |
ERR2510349 | HR-TB | lineage3 | pk |
SRR1723604 | MDR-TB | lineage2.2.1 | None |
ERR13192113 | MDR-TB | lineage2.2.2 | None |
ERR13194049 | MDR-TB | lineage2.2.2 | None |
ERR13194859 | MDR-TB | lineage2.2.2 | None |
ERR13194025 | MDR-TB | lineage2.2.2 | None |
ERR13195056 | MDR-TB | lineage2.2.2 | None |
ERR13195220 | MDR-TB | lineage2.2.2 | None |
ERR13195379 | MDR-TB | lineage2.2.2 | None |
ERR13195058 | MDR-TB | lineage2.2.2 | None |
ERR13195561 | MDR-TB | lineage2.2.2 | None |
ERR13195616 | Pre-XDR-TB | lineage2.2.2 | None |
ERR13265094 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4820400 | HR-TB | lineage3 | gb |
SRR19267893 | Sensitive | lineage2.2.2 | None |
SRR16370661 | Sensitive | lineage2.2.2 | None |
SRR28859662 | Sensitive | lineage2.2.2 | None |
SRR2024935 | MDR-TB | lineage2.2.1 | cn |
SRR2024956 | Pre-XDR-TB | lineage2.2.1 | cn |
SRR1048850 | Pre-XDR-TB | lineage2.2.2 | None |
ERR7911506 | MDR-TB | lineage2.2.1 | vn |
ERR4800299 | Other | lineage3.1.2 | in |
SRR28044432 | Sensitive | lineage3 | None |
DRR188638 | Sensitive | lineage2.2.1 | None |
ERR1007898 | HR-TB | lineage3 | None |
ERR2514514 | Other | lineage3 | gb |
SRR10315557 | Sensitive | lineage2.2.1 | None |
SRR7655613 | Sensitive | lineage4.8 | None |
SRR28045968 | Sensitive | lineage1.1.2 | None |
ERR4403842 | RR-TB | lineage2.2.1 | None |
SRR2100537 | Sensitive | lineage3 | None |
ERR1465808 | Sensitive | lineage4.1.2.1 | rs |
SRR29053340 | Sensitive | lineage4.4.2 | None |
SRR30182616 | Sensitive | lineage2.2.1 | None |
SRR12142372 | MDR-TB | lineage2.2.1 | None |
SRR6824702 | MDR-TB | lineage2.2.1;lineage4.4.2 | cn |
ERR4819007 | Other | lineage2.2.1 | None |
SRR23691399 | Sensitive | lineage2.2.2 | None |
DRR473762 | Sensitive | lineage2.2.1 | None |
SRR7655615 | Sensitive | lineage4.8 | None |
ERR2516620 | Sensitive | lineage4.3.2 | pe |
ERR7361955 | Other | lineage3 | None |
ERR4819181 | Sensitive | lineage3 | gb |
SRR1166935 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR9286070 | Sensitive | lineage3 | None |
SRR22250097 | HR-TB | lineage1.1.1.1 | None |
ERR4276907 | Pre-XDR-TB | lineage3.1 | None |
SRR20969948 | Sensitive | lineage2.2.1 | None |
ERR4830898 | MDR-TB | lineage2.2.1 | None |
ERR4799739 | MDR-TB | lineage2.2.1.1 | in |
ERR228180 | Sensitive | lineage3 | None |
SRR21689578 | Sensitive | lineage3 | None |
SRR25207137 | RR-TB | lineage2.2.1 | None |
SRR22351876 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13243569 | Pre-XDR-TB | lineage2.2.2 | None |
SRR12142387 | HR-TB | lineage2.2.1 | None |
ERR5979435 | Pre-XDR-TB | lineage3.1 | None |
ERR2512446 | Sensitive | lineage4.1.2.1 | gb |
SRR1013662 | Pre-XDR-TB | lineage2.2.2 | None |
SRR29356788 | MDR-TB | lineage2.2.1 | None |
ERR13290750 | HR-TB | lineage2.2.2 | None |
ERR2513843 | Sensitive | lineage3 | gb |
SRR28859667 | Sensitive | lineage4.1.2.1 | None |
SRR26112511 | Sensitive | lineage2.2.1 | None |
SRR27450321 | Sensitive | lineage3 | None |
SRR1173279 | Sensitive | lineage3 | None |
ERR13194007 | MDR-TB | lineage2.2.2 | None |
SRR25207347 | MDR-TB | lineage2.2.1 | None |
ERR13290852 | RR-TB | lineage2.2.1 | None |
SRR1723605 | MDR-TB | lineage2.2.1 | None |
SRR21001885 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21001884 | Pre-XDR-TB | lineage2.2.1 | None |
SRR27332357 | Sensitive | lineage3 | None |
ERR11067253 | MDR-TB | lineage4.8 | None |
ERR11044652 | Sensitive | lineage3 | None |
ERR7737624 | MDR-TB | lineage4.2.2.2 | None |
ERR13290834 | RR-TB | lineage2.2.1 | None |
SRR16088566 | Pre-XDR-TB | lineage2.2.1 | None |
SRR22251790 | MDR-TB | lineage2.2.1 | None |
SRR22249661 | MDR-TB | lineage4.6.2.2 | None |
ERR2517644 | Sensitive | lineage4.1.2.1 | nl |
SRR28860133 | Sensitive | lineage4.1.2.1 | None |
SRR18591742 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1013551 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4822609 | Pre-XDR-TB | lineage3.1 | de |
ERR11082915 | Sensitive | lineage4.8 | None |
SRR1049028 | Pre-XDR-TB | lineage2.2.2 | None |
ERR4811366 | MDR-TB | lineage2.2.1 | None |
SRR21690857 | Sensitive | lineage3 | None |
SRR6824646 | MDR-TB | lineage2.2.1;lineage4.5 | cn |
ERR13290600 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR4831630 | MDR-TB | lineage2.2.1 | vn |
SRR25515072 | Other | lineage4.4.2 | None |
ERR13261091 | Other | lineage3.1.2.1 | None |
ERR752087 | HR-TB | lineage2.2.1 | th |
SRR28045190 | Sensitive | lineage3 | None |
ERR751857 | Sensitive | lineage1.2.2.2 | th |
SAMN02360610 | Pre-XDR-TB | lineage2.2.2 | kr |
SRR20969586 | MDR-TB | lineage2.2.1 | None |
SRR21675610 | Sensitive | lineage4.4.2 | None |
SRR6046457 | Other | lineage3 | gb |
ERR10748519 | MDR-TB | lineage4.1.1.1 | None |
SRR14801292 | MDR-TB | lineage4.2.1 | None |
ERR3275335 | Sensitive | lineage4.1.2.1 | nl |
SRR11662504 | MDR-TB | lineage2.2.1 | None |
SRR27332348 | Sensitive | lineage4.6.3 | None |
ERR867558 | Sensitive | lineage3 | None |
ERR4820729 | Sensitive | lineage2.2.1 | None |
SRR28046256 | Sensitive | lineage3 | None |
ERR3275463 | Sensitive | lineage4.1.2.1 | nl |
ERR11082257 | Sensitive | lineage3 | None |
SRR29096677 | Sensitive | lineage3 | None |
SAMN02414970 | Pre-XDR-TB | lineage4.2.2.2 | se |
SRR1167151 | Pre-XDR-TB | lineage4.2.2.2 | None |
ERR4798462 | MDR-TB | lineage3.1.2 | in |
SRR6824451 | MDR-TB | lineage2.2.1 | cn |
SRR7654039 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1162897 | Pre-XDR-TB | lineage4.2.2.2 | None |
SRR3725715 | Sensitive | lineage3 | None |
ERR4816025 | Sensitive | lineage3 | None |
DRR188563 | Sensitive | lineage2.2.1 | None |