Rv1129c - p.Thr131Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
50 Sensitive
6 RR-TB
27 HR-TB
152 MDR-TB
68 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 103 |
| lineage4.6.1.2 | 23 |
| lineage4.1.1.1 | 6 |
| lineage4.4 | 2 |
| lineage4.2.2.1 | 2 |
| lineage2.2.1.1 | 8 |
| lineage4.4.2 | 8 |
| lineage4.9 | 3 |
| lineage4.2.2.2 | 52 |
| lineage4.1.2.1 | 13 |
| lineage4.5 | 8 |
| lineage4.1.1.3 | 3 |
| lineage4.8 | 15 |
| lineage4 | 3 |
| lineage4.1.4 | 1 |
| lineage4.6.2.2 | 4 |
| lineage3 | 5 |
| lineage4.6.4 | 12 |
| lineage3.1.1 | 1 |
| lineage2.2;lineage4.2.2.2 | 1 |
| lineage4.7 | 3 |
| lineage4.2.2 | 4 |
| lineage2.2.2 | 6 |
| lineage4.3.2 | 2 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1;lineage4.6.1.2 | 4 |
| lineage1.1.3 | 1 |
| lineage4.3.3 | 4 |
| lineage5.1.3 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage2.1 | 2 |
| lineage4.2.1 | 2 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.3;lineage4.6.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 313 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29772660 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213725 | HR-TB | lineage4.6.1.2 | None | SRR29053403 | HR-TB | lineage4.1.1.1 | None | ERR171157 | Other | lineage4.4 | my | SRR3085249 | MDR-TB | lineage4.2.2.1 | None | SRR10305999 | MDR-TB | lineage2.2.1.1 | None | SRR15368941 | Sensitive | lineage4.4.2 | None | SAMN02360602 | MDR-TB | lineage4.4.2 | kr | ERR4818917 | Sensitive | lineage4.9 | None | SRR1163413 | MDR-TB | lineage4.2.2.2 | None | SRR29231791 | MDR-TB | lineage4.6.1.2 | None | ERR4830797 | MDR-TB | lineage4.2.2.2 | et | ERR294226 | HR-TB | lineage4.2.2.2 | None | ERR2653217 | MDR-TB | lineage4.1.2.1 | None | SAMN02414927 | MDR-TB | lineage4.6.1.2 | se | SAMN02414977 | MDR-TB | lineage4.2.2.2 | se | ERR4810867 | MDR-TB | lineage2.2.1 | cn | ERR11082744 | MDR-TB | lineage2.2.1 | None | ERR5866488 | MDR-TB | lineage2.2.1 | None | ERR4810963 | MDR-TB | lineage2.2.1 | cn | SRR21689493 | Sensitive | lineage4.5 | None | ERR751693 | Sensitive | lineage4.5 | th | ERR3287637 | MDR-TB | lineage4.1.1.3 | pe | SRR25515025 | Other | lineage2.2.1 | None | ERR7911463 | HR-TB | lineage4.8 | za | SRR28394298 | MDR-TB | lineage4 | None | SRR2024991 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR7911312 | MDR-TB | lineage2.2.1.1 | vn | ERR4811297 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4811557 | MDR-TB | lineage2.2.1 | cn | ERR4830572 | MDR-TB | lineage2.2.1 | tm | ERR2707051 | MDR-TB | lineage4.6.1.2 | cd | ERR4829488 | MDR-TB | lineage4.1.2.1 | it | ERR987787 | MDR-TB | lineage4.6.1.2 | None | SRR1165372 | MDR-TB | lineage4.2.2.2 | None | SRR28393710 | Sensitive | lineage4.1.4 | None | ERR6358965 | MDR-TB | lineage4.6.1.2 | None | ERR3324344 | Sensitive | lineage4.6.2.2 | None | ERR2510541 | Pre-XDR-TB | lineage3 | None | ERR2510678 | Pre-XDR-TB | lineage2.2.1 | it | ERR11082240 | MDR-TB | lineage4.2.2.2 | None | SAMEA2534333 | MDR-TB | lineage2.2.1 | uz | SRR6280156 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6280158 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6045046 | Sensitive | lineage4.1.1.1 | gb | SRR6824377 | MDR-TB | lineage2.2.1.1 | cn | SRR1049043 | MDR-TB | lineage4.4.2 | None | SRR6824403 | MDR-TB | lineage2.2.1 | cn | ERR11069129 | MDR-TB | lineage4.2.2.2 | None | ERR11082611 | MDR-TB | lineage2.2.1 | None | ERR1654671 | MDR-TB | lineage4.6.1.2 | None | ERR038739 | MDR-TB | lineage4.6.1.2 | ug | ERR9285957 | Sensitive | lineage4.6.1.2 | None | ERR11798558 | MDR-TB | lineage2.2.1 | None | ERR11773782 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088109 | MDR-TB | lineage2.2.1 | None | SRR12882715 | Sensitive | lineage3 | None | SRR5818592 | MDR-TB | lineage4.2.2.2 | dj | SRR5065361 | HR-TB | lineage2.2.1 | vn | SRR5818655 | MDR-TB | lineage4.2.2.2 | dj | SRR14782400 | Sensitive | lineage4.8 | None | SRR5074000 | Other | lineage2.2.1 | vn | ERR2516563 | Other | lineage4.1.2.1 | nl | ERR2517342 | MDR-TB | lineage4.2.2.2 | nl | ERR10868818 | Pre-XDR-TB | lineage2.2.1 | None | SRR5074185 | MDR-TB | lineage2.2.1 | vn | ERR1035290 | Pre-XDR-TB | lineage4.6.4 | br | ERR7737935 | MDR-TB | lineage3.1.1 | None | ERR9893151 | Sensitive | lineage4.2.2.2 | None | ERR11043176 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013646 | MDR-TB | lineage4.4.2 | None | SRR1013647 | MDR-TB | lineage4.4.2 | None | SRR25207317 | MDR-TB | lineage4.5 | None | SRR18593214 | MDR-TB | lineage2.2;lineage4.2.2.2 | None | ERR13285143 | MDR-TB | lineage4.7 | None | ERR13290627 | MDR-TB | lineage4.2.2.2 | None | SRR25207059 | MDR-TB | lineage4.2.2 | None | SRR25827552 | Pre-XDR-TB | lineage4.8 | None | SRR25207387 | MDR-TB | lineage2.2.1 | None | SRR1723677 | Pre-XDR-TB | lineage2.2.1 | None | ERR5918003 | Pre-XDR-TB | lineage2.2.2 | za | ERR3287877 | MDR-TB | lineage4.1.1.3 | pe | ERR11082403 | Sensitive | lineage4.3.2 | None | ERR4810820 | Sensitive | lineage4.5 | cn | ERR13273058 | Sensitive | lineage4.3.2 | None | ERR8025466 | Pre-XDR-TB | lineage2.2.2 | None | SRR15316023 | MDR-TB | lineage2.2.1 | None | SRR22528524 | Sensitive | lineage4.1.1 | None | SRR9224921 | Other | lineage4.1.1.1 | None | SRR26937152 | HR-TB | lineage2.2.1 | None | SRR1049563 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR6357001 | Pre-XDR-TB | lineage2.2.1 | None | SRR26112451 | Sensitive | lineage2.2.2 | None | ERR4830787 | MDR-TB | lineage4.2.2.2 | None | ERR13243511 | Pre-XDR-TB | lineage2.2.2 | None | ERR551987 | MDR-TB | lineage2.2.1 | None | SRR29052985 | Sensitive | lineage4.2.2.2 | None | ERR2446297 | MDR-TB | lineage4.2.2.2 | nl | ERR3275476 | MDR-TB | lineage4.2.2.2 | nl | ERR11081701 | MDR-TB | lineage4.2.2.2 | None | SRR1049042 | MDR-TB | lineage4.4.2 | None | SRR20969692 | MDR-TB | lineage2.2.1 | None | SRR18714912 | MDR-TB | lineage2.2.1 | None | SRR28859622 | Sensitive | lineage1.1.3 | None | ERR4195384 | Sensitive | lineage4.3.3 | None | ERR11067190 | MDR-TB | lineage5.1.3 | None | SRR1167061 | MDR-TB | lineage4.2.2.2 | None | SRR25206988 | MDR-TB | lineage4.2.2 | None | SRR1062873 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR11662693 | Pre-XDR-TB | lineage1.1.1.1;lineage2.2.1 | None | SRR1140710 | MDR-TB | lineage4.6.1.2 | None | SRR1162895 | MDR-TB | lineage4.6.1.2 | None | ERR123926 | HR-TB | lineage4.6.1.2 | None | SRR25207157 | Pre-XDR-TB | lineage2.2.1 | None | ERR13275889 | Sensitive | lineage2.2.1 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | ERR13290626 | MDR-TB | lineage4.2.2.2 | None | ERR1035303 | Pre-XDR-TB | lineage4.6.4 | br | SRR16088500 | Other | lineage2.2.1 | None | ERR11049545 | Sensitive | lineage4.1.2.1 | None | SRR21887675 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043265 | MDR-TB | lineage4.8 | None | SRR7653025 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639793 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069128 | MDR-TB | lineage4.2.2.2 | None | ERR13281459 | MDR-TB | lineage2.2.1 | None | ERR11081695 | MDR-TB | lineage4.2.2.2 | None | ERR13284404 | MDR-TB | lineage2.2.1 | None | ERR13285742 | Pre-XDR-TB | lineage4.8 | None | ERR1035274 | Pre-XDR-TB | lineage4.6.4 | br | ERR7737675 | MDR-TB | lineage4.2.2.2 | None | SRR10040221 | MDR-TB | lineage2.2.1 | None | SRR1163142 | MDR-TB | lineage4.2.2.2 | None | ERR9121468 | Sensitive | lineage4.3.3 | None | SRR25207201 | RR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | ERR278538 | MDR-TB | lineage4.2.2.2 | None | SRR11662162 | Pre-XDR-TB | lineage2.1 | None | ERR1035307 | MDR-TB | lineage4.6.4 | br | ERR1035364 | Pre-XDR-TB | lineage4.6.4 | br | ERR6359131 | MDR-TB | lineage4.6.1.2 | None | ERR1035259 | Pre-XDR-TB | lineage4.6.4 | br | ERR11068656 | Sensitive | lineage3 | None | ERR10762251 | Pre-XDR-TB | lineage4.8 | None | SRR21675844 | Other | lineage4.2.2.2 | None | SRR23862109 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772762 | Pre-XDR-TB | lineage2.2.1 | None | SRR23310850 | Pre-XDR-TB | lineage4.2.1 | None | SRR11662691 | Pre-XDR-TB | lineage1.1.3.3;lineage2.2.1 | None | SRR1049564 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163206 | MDR-TB | lineage4.6.1.2 | None | ERR11252650 | Sensitive | lineage4.1.2.1 | None | ERR11081950 | MDR-TB | lineage4.8 | None | SRR14519129 | Sensitive | lineage2.2.1.1 | None | SRR21031757 | Sensitive | lineage4.2.2 | None | ERR386897 | MDR-TB | lineage4.2.2.2 | None | ERR1035324 | MDR-TB | lineage4.6.4 | br | SRR25207007 | MDR-TB | lineage4.5 | None | SRR29051196 | Sensitive | lineage4.2.2.2 | None | SAMN03246414 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1035310 | MDR-TB | lineage4.6.4 | br | ERR1035363 | Pre-XDR-TB | lineage4.6.4 | br | ERR4457869 | Sensitive | lineage4 | None | SRR15723291 | Sensitive | lineage2.2.1 | None | SRR25207147 | MDR-TB | lineage2.2.1 | None | ERR7737947 | MDR-TB | lineage4.2.2.2 | None | ERR4796792 | MDR-TB | lineage4.2.2.2 | in | SRR12420787 | Sensitive | lineage2.2.1 | None | DRR130193 | Pre-XDR-TB | lineage4.9 | None | SRR28044699 | MDR-TB | lineage4.9 | None | SRR29051374 | Other | lineage4.1.1.1 | None | SRR28393334 | MDR-TB | lineage4.1.2.1 | None | SRR3725689 | Other | lineage4.7 | None | SRR23691420 | MDR-TB | lineage2.2.2 | None | SRR671754 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671755 | Pre-XDR-TB | lineage2.2.1 | cn | SRR671849 | MDR-TB | lineage2.2.1 | cn | ERR4810843 | RR-TB | lineage2.2.1 | cn | SRR25206950 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287641 | MDR-TB | lineage4.1.1.3 | pe | SRR28706505 | MDR-TB | lineage2.2.1 | None | SRR27069408 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069407 | MDR-TB | lineage2.2.1 | None | SRR25515560 | MDR-TB | lineage2.2.1 | None | SRR28706450 | MDR-TB | lineage2.2.1 | None | SRR10040146 | RR-TB | lineage4.4.2 | None | ERR1035348 | Pre-XDR-TB | lineage4.6.4 | br | ERR4832010 | HR-TB | lineage2.2.1 | vn | SRR2024952 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024951 | Pre-XDR-TB | lineage2.2.1 | cn | ERR1023411 | MDR-TB | lineage4.6.1.2 | None | ERR1023421 | RR-TB | lineage4.4.1.1 | None | ERR4830821 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR502939 | MDR-TB | lineage4.4 | None | ERR4830825 | MDR-TB | lineage4.2.2.2 | et | ERR2510842 | MDR-TB | lineage4.2.2.1 | it | ERR4178195 | Sensitive | lineage4.8 | None | SRR1723696 | MDR-TB | lineage2.2.1.1 | None | SRR20969918 | Sensitive | lineage4.5 | None | ERR12916906 | Pre-XDR-TB | lineage2.2.1 | None | ERR123927 | HR-TB | lineage4.6.1.2 | None | SRR2100166 | HR-TB | lineage4.6.1.2 | None | SRR2100300 | HR-TB | lineage4.6.2.2 | None | SRR2100394 | HR-TB | lineage4.6.1.2 | None | SRR2100925 | MDR-TB | lineage4.2.2.2 | None | SRR2101024 | HR-TB | lineage4.2.2.2 | None | ERR1199106 | MDR-TB | lineage4.6.1.2 | cd | ERR038748 | MDR-TB | lineage4.6.1.2 | ug | ERR1413477 | HR-TB | lineage4.6.1.2 | gb | SRR7341671 | MDR-TB | lineage4.4.1.1 | ro | ERR2516962 | MDR-TB | lineage4.2.2.2 | gb | ERR2516944 | MDR-TB | lineage4.2.2.2 | gb | SRR6280213 | Pre-XDR-TB | lineage2.2.1 | cn | SRR12420472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195312 | Sensitive | lineage4.4.1.1 | None | ERR11043636 | MDR-TB | lineage4.7 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | ERR6865474 | Sensitive | lineage4.8 | None | ERR3794455 | MDR-TB | lineage2.2.1 | None | SRR12420453 | RR-TB | lineage2.2.1 | None | SRR28434981 | Pre-XDR-TB | lineage2.2.1 | None | DRR185097 | HR-TB | lineage2.2.1 | vn | SRR25515865 | MDR-TB | lineage2.2.1 | None | DRR184624 | Sensitive | lineage2.2.1 | vn | ERR551986 | MDR-TB | lineage2.2.1 | None | ERR9117717 | Sensitive | lineage4.8 | None | SRR23691413 | Pre-XDR-TB | lineage4.5 | None | SRR7068947 | Sensitive | lineage4.8 | None | ERR11043392 | MDR-TB | lineage2.2.1 | None | ERR3273215 | MDR-TB | lineage4.1.2.1 | None | SRR1062906 | MDR-TB | lineage4.6.1.2 | None | ERR5866489 | MDR-TB | lineage2.2.1 | None | SRR15316341 | MDR-TB | lineage4.5 | None | SRR10040341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043175 | Pre-XDR-TB | lineage2.2.1 | None | ERR11080920 | MDR-TB | lineage4.2.2.2 | None | ERR114451 | HR-TB | lineage4.6.2.2 | None | SRR23340027 | MDR-TB | lineage2.2.1 | None | ERR4811171 | Sensitive | lineage2.2.1 | cn | SRR16057881 | Sensitive | lineage3 | None | ERR2307712 | Pre-XDR-TB | lineage2.2.1 | None | ERR3256282 | HR-TB | lineage1.2.1.2.1 | ph | ERR1035355 | Pre-XDR-TB | lineage4.6.4 | br | SRR21728716 | HR-TB | lineage4.4.2 | None | ERR13285025 | MDR-TB | lineage4.2.2.2 | None | SRR25206881 | MDR-TB | lineage2.2.1 | None | SRR6485039 | MDR-TB | lineage4.1.2.1 | None | SRR29017374 | Sensitive | lineage4.3.3 | None | SRR1723792 | MDR-TB | lineage2.2.1 | cn | ERR13195541 | MDR-TB | lineage2.2.2 | None | ERR13284195 | MDR-TB | lineage2.2.1 | None | ERR13289687 | Sensitive | lineage4.1.1.1 | None | ERR11049547 | Sensitive | lineage4.1.2.1 | None | ERR13260356 | MDR-TB | lineage2.2.1 | None | ERR3639712 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715308 | Pre-XDR-TB | lineage2.2.1 | None | ERR3276064 | Pre-XDR-TB | lineage4.1.2.1 | nl | SRR11662352 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207249 | MDR-TB | lineage2.2.1 | None | ERR3639721 | MDR-TB | lineage2.2.1 | None | SRR11972250 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11049546 | Sensitive | lineage4.1.2.1 | None | ERR13285047 | MDR-TB | lineage4.2.2.2 | None | SRR21240238 | HR-TB | lineage4.4.1.1 | None | ERR13284960 | MDR-TB | lineage4.2.2.2 | None | ERR13290628 | MDR-TB | lineage4.2.2.2 | None | SRR23691410 | MDR-TB | lineage2.2.1 | None | SRR1140691 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | ERR7737647 | MDR-TB | lineage4.2.2.2 | None | ERR13439882 | HR-TB | lineage2.2.1 | None | SRR29539395 | HR-TB | lineage4.2.1 | None | SRR10305980 | MDR-TB | lineage2.2.1 | None | SRR12420264 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818531 | Sensitive | lineage4.8 | None | SRR14781907 | Pre-XDR-TB | lineage2.2.1 | None | SRR16915720 | MDR-TB | lineage4.3.3 | None | ERR6358740 | MDR-TB | lineage4.6.1.2 | None | SRR3082137 | MDR-TB | lineage4.2.2.2 | None | ERR13194057 | MDR-TB | lineage2.2.1 | None | SRR11662677 | Pre-XDR-TB | lineage2.1 | None | ERR4827946 | HR-TB | lineage4 | None | SRR11662562 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050656 | RR-TB | lineage4.1.1.1 | None | ERR11080856 | MDR-TB | lineage4.2.2.2 | None | SRR21675845 | Sensitive | lineage4.2.2.2 | None | SRR16088334 | MDR-TB | lineage2.2.1 | None | ERR10748336 | MDR-TB | lineage2.2.1 | None | ERR4827588 | MDR-TB | lineage2.2.1 | None | ERR13290629 | MDR-TB | lineage4.2.2.2 | None | ERR13284846 | MDR-TB | lineage4.8 | None | ERR10748505 | MDR-TB | lineage2.2.1 | None | ERR9121687 | Sensitive | lineage4.4.1.1 | None | SRR28706553 | Pre-XDR-TB | lineage2.2.1 | None | SRR21690604 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR13423535 | MDR-TB | lineage2.2.1 | None | SAMN03246429 | MDR-TB | lineage2.2.1.1 | cn | ERR13284712 | MDR-TB | lineage4.2.2.2 | None | ERR3132208 | Other | lineage4.1.2.1 | None | ERR13285002 | MDR-TB | lineage4.2.2.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR13284999 | MDR-TB | lineage4.2.2.2 | None | ERR11050152 | MDR-TB | lineage4.2.2.2 | None | ERR1035325 | Pre-XDR-TB | lineage4.6.4 | br | ERR13284998 | MDR-TB | lineage4.2.2.2 | None | ERR13284963 | MDR-TB | lineage4.8 | None | ERR1035319 | MDR-TB | lineage4.3.3;lineage4.6.4 | br | ERR13285000 | MDR-TB | lineage4.2.2.2 | None | SRR13232633 | Sensitive | lineage4.8 | None | ERR6397162 | Sensitive | lineage4.2.2.2 | None | ERR9125752 | Sensitive | lineage3 | None | ERR551986_ERR551987 | MDR-TB | lineage2.2.1 | None | ERR4797587 | Pre-XDR-TB | lineage4.2.2 | in |
|---|
