ERR11067190
|
MDR-TB
|
lineage5.1.3
|
None
|
SRR25207249
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3639721
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11972250
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR21240238
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR6045046
|
Sensitive
|
lineage4.1.1.1
|
gb
|
ERR13290628
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911312
|
MDR-TB
|
lineage2.2.1.1
|
vn
|
SRR11662693
|
Pre-XDR-TB
|
lineage1.1.1.1;lineage2.2.1
|
None
|
SRR1140710
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR16088500
|
Other
|
lineage2.2.1
|
None
|
SRR21887675
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR502939
|
MDR-TB
|
lineage4.4
|
None
|
SRR11662677
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR11081695
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2179669
|
MDR-TB
|
lineage4.4
|
cn
|
ERR1035274
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR7737675
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11080856
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR16088334
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10748505
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR278538
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1035307
|
MDR-TB
|
lineage4.6.4
|
br
|
ERR1035325
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR1035364
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
SRR21690604
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR13423535
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23862109
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5074185
|
MDR-TB
|
lineage2.2.1
|
vn
|
SRR11662691
|
Pre-XDR-TB
|
lineage1.1.3.3;lineage2.2.1
|
None
|
SRR1049564
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR1163206
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4811297
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR11252650
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR14519129
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21031757
|
Sensitive
|
lineage4.2.2
|
None
|
ERR13290629
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR2517342
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
SRR2100166
|
HR-TB
|
lineage4.6.1.2
|
None
|
ERR4796792
|
MDR-TB
|
lineage4.2.2.2
|
in
|
SRR6824403
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR3256282
|
HR-TB
|
lineage1.2.1.2.1
|
ph
|
SAMEA2534333
|
MDR-TB
|
lineage2.2.1
|
uz
|
ERR9125752
|
Sensitive
|
lineage3
|
None
|
ERR13285002
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4457869
|
Sensitive
|
lineage4
|
None
|
SRR18213725
|
HR-TB
|
lineage4.6.1.2
|
None
|
ERR4832010
|
HR-TB
|
lineage2.2.1
|
vn
|
SRR3725689
|
Other
|
lineage4.7
|
None
|
SRR1163413
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25206950
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069408
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR27069407
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515025
|
Other
|
lineage2.2.1
|
None
|
SRR28044699
|
MDR-TB
|
lineage4.9
|
None
|
SRR28706450
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13439882
|
HR-TB
|
lineage2.2.1
|
None
|
ERR13290626
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29539395
|
HR-TB
|
lineage4.2.1
|
None
|
SRR29772762
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29772660
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR987787
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358965
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1723696
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1723998
|
MDR-TB
|
lineage4.4
|
cn
|
ERR123927
|
HR-TB
|
lineage4.6.1.2
|
None
|
ERR3324344
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR6280158
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR11082240
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1049043
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR12420472
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6280213
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR28434981
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11798558
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11773782
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR551986
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1023421
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR9117717
|
Sensitive
|
lineage4.8
|
None
|
ERR2516944
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
ERR10868818
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3287877
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SAMN02360602
|
MDR-TB
|
lineage4.4.2
|
kr
|
ERR2510678
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
SRR2024991
|
Pre-XDR-TB
|
lineage2.2.1.1
|
cn
|
SRR1013646
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR1013647
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR10040341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5818592
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
ERR11080920
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13285143
|
MDR-TB
|
lineage4.7
|
None
|
ERR13290627
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR4810963
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR16057881
|
Sensitive
|
lineage3
|
None
|
ERR038739
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
ERR8025466
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR4830825
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR22528524
|
Sensitive
|
lineage4.1.1
|
None
|
ERR1035355
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
SRR1049563
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR671755
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR25206881
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551987
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081701
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1049042
|
MDR-TB
|
lineage4.4.2
|
None
|
SRR20969692
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662352
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4195384
|
Sensitive
|
lineage4.3.3
|
None
|
ERR11049546
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR751693
|
Sensitive
|
lineage4.5
|
th
|
SRR23691410
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4810820
|
Sensitive
|
lineage4.5
|
cn
|
ERR4830821
|
Pre-XDR-TB
|
lineage4.2.2.2
|
et
|
SRR10305980
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1162895
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR21728716
|
HR-TB
|
lineage4.4.2
|
None
|
ERR1023411
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR1035303
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR11049545
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR7653025
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR130193
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR4827946
|
HR-TB
|
lineage4
|
None
|
SRR11662562
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3639793
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2446297
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR10748336
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4827588
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11082403
|
Sensitive
|
lineage4.3.2
|
None
|
SRR11662162
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR28706553
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284999
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11068656
|
Sensitive
|
lineage3
|
None
|
ERR10762251
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR23310850
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SAMN03246429
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
ERR2510541
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4830572
|
MDR-TB
|
lineage2.2.1
|
tm
|
ERR11050152
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1199106
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SAMN03246414
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SAMN02414977
|
MDR-TB
|
lineage4.2.2.2
|
se
|
ERR171157
|
Other
|
lineage4.4
|
my
|
SRR2024952
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR12420787
|
Sensitive
|
lineage2.2.1
|
None
|
SRR10305999
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR15368941
|
Sensitive
|
lineage4.4.2
|
None
|
ERR2653217
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR1035324
|
MDR-TB
|
lineage4.6.4
|
br
|
ERR11082744
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866488
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4797587
|
Pre-XDR-TB
|
lineage4.2.2
|
in
|
SRR25207157
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4178195
|
Sensitive
|
lineage4.8
|
None
|
ERR4829488
|
MDR-TB
|
lineage4.1.2.1
|
it
|
ERR4195312
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR11043636
|
MDR-TB
|
lineage4.7
|
None
|
ERR10868185
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11069129
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR9285957
|
Sensitive
|
lineage4.6.1.2
|
None
|
ERR4810843
|
RR-TB
|
lineage2.2.1
|
cn
|
SRR2024951
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR12420453
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4811557
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR2510842
|
MDR-TB
|
lineage4.2.2.1
|
it
|
SRR16088109
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515865
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02414927
|
MDR-TB
|
lineage4.6.1.2
|
se
|
SRR14782400
|
Sensitive
|
lineage4.8
|
None
|
SRR28859622
|
Sensitive
|
lineage1.1.3
|
None
|
ERR1035290
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
SRR671754
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4818917
|
Sensitive
|
lineage4.9
|
None
|
ERR2516962
|
MDR-TB
|
lineage4.2.2.2
|
gb
|
ERR9893151
|
Sensitive
|
lineage4.2.2.2
|
None
|
SRR15316341
|
MDR-TB
|
lineage4.5
|
None
|
ERR11043175
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR185097
|
HR-TB
|
lineage2.2.1
|
vn
|
ERR3276064
|
Pre-XDR-TB
|
lineage4.1.2.1
|
nl
|
SRR25827552
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR114451
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR23340027
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1723677
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2307712
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR2101024
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR9224921
|
Other
|
lineage4.1.1.1
|
None
|
ERR13284963
|
MDR-TB
|
lineage4.8
|
None
|
SRR26937152
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3275476
|
MDR-TB
|
lineage4.2.2.2
|
nl
|
ERR4830787
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR13243511
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR6485039
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3639712
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18714912
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2516563
|
Other
|
lineage4.1.2.1
|
nl
|
SRR1167061
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR038748
|
MDR-TB
|
lineage4.6.1.2
|
ug
|
SRR1140691
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
SRR25206988
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR1062873
|
HR-TB
|
lineage4.4.1.1;lineage4.6.1.2
|
None
|
ERR7737647
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR1035319
|
MDR-TB
|
lineage4.3.3;lineage4.6.4
|
br
|
SRR12420264
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4818531
|
Sensitive
|
lineage4.8
|
None
|
SRR14781907
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16915720
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR6358740
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR3082137
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11043265
|
MDR-TB
|
lineage4.8
|
None
|
ERR11069128
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR10040221
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1163142
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR9121468
|
Sensitive
|
lineage4.3.3
|
None
|
SRR25207201
|
RR-TB
|
lineage2.2.1
|
None
|
SRR21675845
|
Sensitive
|
lineage4.2.2.2
|
None
|
ERR9121687
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR5818655
|
MDR-TB
|
lineage4.2.2.2
|
dj
|
ERR6359131
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR1035259
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
SRR21675844
|
Other
|
lineage4.2.2.2
|
None
|
ERR3132208
|
Other
|
lineage4.1.2.1
|
None
|
ERR11081950
|
MDR-TB
|
lineage4.8
|
None
|
ERR386897
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR25207007
|
MDR-TB
|
lineage4.5
|
None
|
SRR13232633
|
Sensitive
|
lineage4.8
|
None
|
ERR6397162
|
Sensitive
|
lineage4.2.2.2
|
None
|
ERR4811171
|
Sensitive
|
lineage2.2.1
|
cn
|
ERR1035310
|
MDR-TB
|
lineage4.6.4
|
br
|
ERR1035363
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR551986_ERR551987
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15723291
|
Sensitive
|
lineage2.2.1
|
None
|
ERR7737947
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR3085249
|
MDR-TB
|
lineage4.2.2.1
|
None
|
SRR28393334
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR294226
|
HR-TB
|
lineage4.2.2.2
|
None
|
SRR23691420
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR21689493
|
Sensitive
|
lineage4.5
|
None
|
SRR28706505
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25515560
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100394
|
HR-TB
|
lineage4.6.1.2
|
None
|
SRR28394298
|
MDR-TB
|
lineage4
|
None
|
SRR10040146
|
RR-TB
|
lineage4.4.2
|
None
|
ERR1035348
|
Pre-XDR-TB
|
lineage4.6.4
|
br
|
ERR7911463
|
HR-TB
|
lineage4.8
|
za
|
SRR25207147
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165372
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR28393710
|
Sensitive
|
lineage4.1.4
|
None
|
ERR4810867
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR20969918
|
Sensitive
|
lineage4.5
|
None
|
ERR12916906
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2707051
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR5074000
|
Other
|
lineage2.2.1
|
vn
|
ERR11082611
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1654671
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR13273058
|
Sensitive
|
lineage4.3.2
|
None
|
ERR6865474
|
Sensitive
|
lineage4.8
|
None
|
ERR3794455
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR2100300
|
HR-TB
|
lineage4.6.2.2
|
None
|
SRR2100925
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR12882715
|
Sensitive
|
lineage3
|
None
|
SRR23691413
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
SRR7068947
|
Sensitive
|
lineage4.8
|
None
|
ERR11043392
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3273215
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR1723792
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR11444077
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR1062906
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR5866489
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737935
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR11043176
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25207317
|
MDR-TB
|
lineage4.5
|
None
|
SRR18593214
|
MDR-TB
|
lineage2.2;lineage4.2.2.2
|
None
|
SRR25207059
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR6280156
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
SRR25207387
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4830797
|
MDR-TB
|
lineage4.2.2.2
|
et
|
SRR15316023
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6824377
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR6824501
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7341671
|
MDR-TB
|
lineage4.4.1.1
|
ro
|
ERR5918003
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
ERR13285025
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR29231791
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR1413477
|
HR-TB
|
lineage4.6.1.2
|
gb
|
SRR6357001
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR26112451
|
Sensitive
|
lineage2.2.2
|
None
|
DRR184624
|
Sensitive
|
lineage2.2.1
|
vn
|
SRR29051196
|
Sensitive
|
lineage4.2.2.2
|
None
|
ERR3287637
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287641
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR11049547
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR18715308
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|