Rv1644 - c.-122_-120delAGCinsGCG
Drug resistance types
0 Sensitive
1 RR-TB
11 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 2 |
| 2 | |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12142341 | HR-TB | lineage2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR18213713 | HR-TB | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
|---|
