ERR4799994
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.3.3
|
None
|
ERR11044765
|
Sensitive
|
lineage3.1.2
|
None
|
SRR1175108
|
Other
|
lineage3.1.2
|
None
|
ERR2517123
|
MDR-TB
|
lineage3.1.2
|
gb
|
ERR266557
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230978
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014604
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR2513961
|
HR-TB
|
lineage3.1.2
|
None
|
ERR11044915
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4799879
|
Other
|
lineage3.1.2
|
in
|
ERR2513297
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827364
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
ERR2514737
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR2514033
|
Other
|
lineage3.1.2
|
gb
|
SRR25340925
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231399
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13289583
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR13266816
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR13261352
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798565
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4799874
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR1169552
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4817531
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR15014752
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR25827868
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR29231458
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261471
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3.1.2;lineage4.4
|
None
|
SRR29230880
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045772
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231510
|
Other
|
lineage3.1.2
|
None
|
SRR25340937
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800507
|
HR-TB
|
lineage3.1.2
|
in
|
ERR4821366
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266513
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29124269
|
Other
|
lineage3.1.2
|
None
|
ERR4800674
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4821687
|
HR-TB
|
lineage3.1.2
|
gb
|
ERR13266753
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR22175180
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR17832800
|
Sensitive
|
lineage3.1.2
|
None
|
SRR1172797
|
Other
|
lineage3.1.2
|
None
|
SRR2100086
|
Other
|
lineage3.1.2
|
None
|
SRR28868786
|
Sensitive
|
lineage3.1.2
|
None
|
ERR2510632
|
HR-TB
|
lineage3.1.2
|
pk
|
ERR4799861
|
Other
|
lineage3.1.2
|
in
|
SRR29126665
|
Other
|
lineage3.1.2
|
None
|
ERR4796883
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4797280
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4799397
|
Sensitive
|
lineage3.1.2
|
in
|
SRR29772368
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR7070227
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799146
|
Sensitive
|
lineage3.1.2
|
in
|
ERR2510304
|
Pre-XDR-TB
|
lineage3.1.2
|
pk
|
ERR4798815
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4798986
|
Sensitive
|
lineage3.1.2
|
in
|
SRR27450430
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045904
|
Other
|
lineage3.1.2
|
None
|
SRR28045503
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21732987
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045915
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22424756
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR28046160
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045831
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045759
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045815
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR6153056
|
Sensitive
|
lineage3.1.2
|
ca
|
ERR4799756
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4799962
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4800036
|
Sensitive
|
lineage3.1.2
|
in
|
ERR9125560
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4796673
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4800344
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR22424893
|
HR-TB
|
lineage3.1.2
|
None
|
SRR22424920
|
HR-TB
|
lineage3.1.2
|
None
|
SRR2100087
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100319
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230871
|
Sensitive
|
lineage3.1.2
|
None
|
SRR30182341
|
Sensitive
|
lineage3.1.2
|
None
|
ERR2514170
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR2515097
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28858414
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046802
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797042
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4800010
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4821592
|
Pre-XDR-TB
|
lineage3.1.2
|
gb
|
SRR25340780
|
HR-TB
|
lineage3.1.2
|
None
|
SRR21733186
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2099981
|
HR-TB
|
lineage3.1.2
|
None
|
ERR11067435
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21689919
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22251148
|
Other
|
lineage3.1.2
|
None
|
SRR25340812
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4796797
|
HR-TB
|
lineage3.1.2
|
in
|
SRR25827511
|
HR-TB
|
lineage2.2.1;lineage3.1.2;lineage4.9
|
None
|
SRR25340747
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827807
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR22175171
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4796838
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4799345
|
Other
|
lineage3.1.2
|
None
|
SRR25827517
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.2.2.2;lineage4.3.3
|
None
|
ERR9125763
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7069680
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340927
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28044673
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230828
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798942
|
XDR-TB
|
lineage3.1.2
|
in
|
ERR4815466
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR4800496
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4797805
|
Other
|
lineage3.1.2
|
in
|
SRR2101236
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799414
|
Sensitive
|
lineage3.1.2
|
in
|
SRR25340832
|
Sensitive
|
lineage3.1.2
|
None
|
ERR117671
|
RR-TB
|
lineage3.1.2
|
None
|
SRR28045527
|
Sensitive
|
lineage3.1.2
|
None
|
ERR386830
|
Sensitive
|
lineage3.1.2
|
None
|
SRR12882332
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11044951
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4821613
|
Pre-XDR-TB
|
lineage3.1.2
|
gb
|
ERR4797854
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4798462
|
MDR-TB
|
lineage3.1.2
|
in
|
SRR6964566
|
Other
|
lineage3.1.2
|
None
|
SRR17658575
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR25827454
|
Other
|
lineage3.1.2
|
None
|
SRR25827876
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21732239
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046816
|
Other
|
lineage3.1.2
|
None
|
SRR7069767
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340793
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798008
|
HR-TB
|
lineage3.1.2
|
in
|
SRR7069100
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100398
|
RR-TB
|
lineage3.1.2
|
None
|
SRR6046664
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21732592
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22424727
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR2513834
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR13292085
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827747
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR18910207
|
Sensitive
|
lineage3.1.2
|
None
|
ERR12119256
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340898
|
Sensitive
|
lineage3.1.2
|
None
|
SRR26056434
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798807
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4814951
|
Pre-XDR-TB
|
lineage3.1.2
|
gb
|
SRR29231096
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797750
|
Other
|
lineage3.1.2
|
in
|
SRR16058420
|
Other
|
lineage3.1.2
|
None
|
ERR386801
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261479
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR15014644
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR25827304
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
ERR4814890
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR29055779
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13265554
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4818534
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR13266949
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29096875
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21733143
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797397
|
Sensitive
|
lineage3.1.2
|
in
|
SRR28045089
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7069295
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340825
|
Other
|
lineage3.1.2
|
None
|
SRR25340968
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340885
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798019
|
Sensitive
|
lineage3.1.2
|
in
|
SRR21733239
|
Sensitive
|
lineage3.1.2
|
None
|
SRR6045984
|
MDR-TB
|
lineage3.1.2
|
gb
|
SRR29231081
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230961
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800069
|
Sensitive
|
lineage3.1.2
|
in
|
SRR22250161
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231079
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798167
|
Sensitive
|
lineage3.1.2;lineage4.5
|
in
|
ERR4799306
|
Sensitive
|
lineage3.1.2
|
in
|
SRR15014775
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR25340824
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7069683
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798390
|
Sensitive
|
lineage3.1.2
|
in
|
SRR29230908
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11081120
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29772642
|
MDR-TB
|
lineage3.1.2
|
None
|
SAMN02599056
|
Other
|
lineage3.1.2
|
in
|
SRR29230943
|
Other
|
lineage3.1.2
|
None
|
ERR4798556
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4799666
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4815353
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR2514811
|
Other
|
lineage3.1.2
|
gb
|
ERR13266834
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4819338
|
Sensitive
|
lineage3.1.2
|
None
|
ERR228225
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798989
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR11050967
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11050268
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29772611
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR13266744
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR2516988
|
MDR-TB
|
lineage3.1.2
|
gb
|
SRR29231119
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014736
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29230925
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7070353
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4831110
|
Sensitive
|
lineage3.1.2
|
de
|
SRR14088378
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4799086
|
MDR-TB
|
lineage3.1.2
|
in
|
SRR29230921
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231230
|
Other
|
lineage3.1.2
|
None
|
SRR25340829
|
Sensitive
|
lineage3.1.2
|
None
|
ERR3335732
|
Pre-XDR-TB
|
lineage3.1.2
|
pk
|
SRR2100613
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100579
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7069165
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045405
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28044515
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28044937
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046017
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046265
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR28045780
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28044728
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4819639
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR046818
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799818
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4815157
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4820113
|
Pre-XDR-TB
|
lineage3.1.2
|
gb
|
SRR2100856
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046815
|
Sensitive
|
lineage3.1.2
|
None
|
SRR16058165
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799652
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4799720
|
Sensitive
|
lineage3.1.2
|
in
|
SRR28046156
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28868543
|
Other
|
lineage3.1.2
|
None
|
SRR29231225
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800585
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR16058640
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340933
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827772
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340915
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340926
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014680
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29230686
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266976
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13265630
|
Sensitive
|
lineage3.1.2
|
None
|
ERR2514086
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR28044968
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340778
|
Sensitive
|
lineage3.1.2;lineage4.8
|
None
|
ERR4796607
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4796620
|
Sensitive
|
lineage3.1.2
|
in
|
SRR15014647
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4797597
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR4797638
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2
|
in
|
SRR6045602
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR15014767
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR7068932
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4796852
|
MDR-TB
|
lineage2.2.1.1;lineage3.1.2
|
in
|
SRR25827341
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.3.3
|
None
|
ERR4797053
|
MDR-TB
|
lineage3.1.2
|
in
|
SRR15014702
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4798801
|
Other
|
lineage3.1.2
|
in
|
ERR4798802
|
MDR-TB
|
lineage3.1.2
|
in
|
SRR22424944
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4831351
|
Sensitive
|
lineage3.1.2
|
de
|
ERR4799903
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR28044438
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798378
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR12882455
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4797222
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4818200
|
Other
|
lineage3.1.2
|
gb
|
ERR4819966
|
HR-TB
|
lineage3.1.2
|
gb
|
ERR4798591
|
HR-TB
|
lineage3.1.2
|
in
|
SRR21690254
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799891
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4796867
|
MDR-TB
|
lineage2.2.1.1;lineage3.1.2
|
in
|
ERR13266791
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4798487
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4798521
|
Other
|
lineage3.1.2
|
in
|
ERR4798537
|
Sensitive
|
lineage3.1.2
|
in
|
SRR28351626
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4817287
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR15014760
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR13266058
|
HR-TB
|
lineage3.1.2
|
None
|
ERR9117848
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340839
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231523
|
Sensitive
|
lineage3.1.2
|
None
|
SRR1172135
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13292205
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799919
|
Pre-XDR-TB
|
lineage3.1.2;lineage4.2.2.2
|
in
|
SRR6045796
|
HR-TB
|
lineage3.1.2
|
None
|
SRR18213800
|
Other
|
lineage3.1.2
|
None
|
SRR28868720
|
Other
|
lineage3.1.2
|
None
|
ERR13266828
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827347
|
Other
|
lineage3.1.2
|
None
|
ERR4800594
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR29772457
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4800272
|
Sensitive
|
lineage3.1.2
|
in
|
ERR13261272
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261356
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR28868897
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261350
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR2513575
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR13261090
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340904
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798318
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4819636
|
Other
|
lineage3.1.2
|
None
|
SRR29231439
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266113
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR29049034
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261312
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340773
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261501
|
Other
|
lineage3.1.2
|
None
|
SRR29230676
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827821
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage3.1.2
|
None
|
ERR4798078
|
Sensitive
|
lineage3.1.2
|
in
|
ERR2514413
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR25340819
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799458
|
Sensitive
|
lineage3.1.2
|
in
|
SRR29231308
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231209
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230715
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799856
|
Other
|
lineage3.1.2
|
in
|
SRR22424858
|
Other
|
lineage3.1.2
|
None
|
ERR4800022
|
Sensitive
|
lineage3.1.2
|
in
|
ERR13262152
|
HR-TB
|
lineage3.1.2
|
None
|
SRR22251384
|
HR-TB
|
lineage3.1.2
|
None
|
SRR7517803
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4796289
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR28046127
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4819246
|
Other
|
lineage3.1.2
|
None
|
SRR29231083
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340930
|
Other
|
lineage3.1.2
|
None
|
SRR7069831
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798332
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4798333
|
Sensitive
|
lineage3.1.2
|
in
|
SRR16058546
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29096286
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231077
|
Sensitive
|
lineage3.1.2;lineage4
|
None
|
SRR29772745
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR21732946
|
Sensitive
|
lineage3.1.2
|
None
|
ERR400347
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR25827301
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR21732931
|
Sensitive
|
lineage3.1.2
|
None
|
SRR24222972
|
HR-TB
|
lineage3.1.2
|
None
|
SRR28046051
|
Sensitive
|
lineage3.1.2
|
None
|
SRR5341245
|
Other
|
lineage3.1.2
|
in
|
SRR25827816
|
XDR-TB
|
lineage3.1.2
|
None
|
ERR9125649
|
Sensitive
|
lineage3.1.2
|
None
|
SRR21658768
|
Other
|
lineage3.1.2
|
None
|
SRR29231145
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798685
|
XDR-TB
|
lineage3.1.2
|
in
|
SRR15014759
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR25340934
|
HR-TB
|
lineage1.1.2;lineage3.1.2
|
None
|
SRR29772773
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR28868520
|
Other
|
lineage3.1.2
|
None
|
SRR29356800
|
HR-TB
|
lineage3.1.2
|
None
|
SRR29772764
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR7069005
|
Other
|
lineage3.1.2
|
None
|
SRR21689568
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261076
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230718
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4831210
|
Sensitive
|
lineage3.1.2
|
None
|
ERR2512636
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR17832801
|
Sensitive
|
lineage3.1.2
|
None
|
ERR2514224
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR4800445
|
Sensitive
|
lineage3.1.2
|
in
|
SRR28045632
|
Sensitive
|
lineage3.1.2
|
None
|
SAMN02598988
|
Sensitive
|
lineage3.1.2
|
in
|
SRR25827695
|
MDR-TB
|
lineage1.1.2;lineage3.1.2
|
None
|
ERR2514602
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR4817870
|
HR-TB
|
lineage3.1.2
|
gb
|
ERR4797531
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR270754
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046014
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046351
|
HR-TB
|
lineage3.1.2
|
None
|
SRR28046183
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28046007
|
Sensitive
|
lineage3.1.2
|
None
|
SRR12882023
|
Sensitive
|
lineage3.1.2
|
None
|
ERR403363
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799369
|
Other
|
lineage3.1.2
|
None
|
ERR4799676
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4800108
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045727
|
Sensitive
|
lineage3.1.2
|
None
|
SRR17406777
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799050
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR22249652
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28351528
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340860
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798032
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR13262094
|
Sensitive
|
lineage3.1.2
|
None
|
ERR114471
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22249819
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4796779
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR25340804
|
Sensitive
|
lineage3.1.2;lineage4.3.3
|
None
|
SRR25340834
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28351585
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR2101181
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22424746
|
HR-TB
|
lineage3.1.2
|
None
|
SRR15014777
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29231634
|
HR-TB
|
lineage3.1.2
|
None
|
SRR25340862
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261390
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22424881
|
HR-TB
|
lineage3.1.2
|
None
|
SRR2100076
|
Sensitive
|
lineage3.1.2
|
None
|
SRR28045122
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799976
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR15014648
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4797671
|
Sensitive
|
lineage3.1.2
|
in
|
SRR25827334
|
Pre-XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR22250110
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798320
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4798985
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4816906
|
Sensitive
|
lineage3.1.2
|
gb
|
SRR21733246
|
RR-TB
|
lineage3.1.2
|
None
|
ERR4800501
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR046830
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800633
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22424797
|
HR-TB
|
lineage3.1.2
|
None
|
SRR28351387
|
XDR-TB
|
lineage3.1.2
|
None
|
ERR4796540
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4815241
|
Other
|
lineage3.1.2
|
gb
|
SRR18213968
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100447
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799506
|
Other
|
lineage3.1.2
|
in
|
ERR4799866
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4796842
|
Sensitive
|
lineage3.1.2
|
in
|
SRR7069569
|
HR-TB
|
lineage3.1.2
|
None
|
SRR2101207
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799943
|
Sensitive
|
lineage3.1.2
|
in
|
SRR22424792
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4799312
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4798932
|
Sensitive
|
lineage3.1.2
|
in
|
ERR11050658
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797037
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR15014698
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4800330
|
Sensitive
|
lineage3.1.2
|
in
|
SRR28045723
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797437
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4799984
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4815945
|
Other
|
lineage3.1.2
|
gb
|
SRR22424775
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29231159
|
Sensitive
|
lineage3.1.2
|
None
|
ERR9125506
|
Other
|
lineage3.1.2
|
None
|
ERR4820783
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR13266731
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4797293
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4797548
|
Sensitive
|
lineage3.1.2
|
in
|
ERR4596931
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR13261354
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13261540
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266993
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4799912
|
Pre-XDR-TB
|
lineage1.2.2.2;lineage3.1.2
|
in
|
SRR30182586
|
Other
|
lineage3.1.2
|
None
|
ERR13290099
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR351898
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4798370
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR28868759
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29097055
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231501
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340779
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230751
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231175
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4814356
|
Other
|
lineage3.1.2
|
None
|
SRR29772772
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR22424836
|
RR-TB
|
lineage3.1.2
|
None
|
SRR22424928
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4820091
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29231167
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13289651
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11068177
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014690
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4797206
|
Sensitive
|
lineage3.1.2
|
in
|
SRR29231094
|
Other
|
lineage3.1.2
|
None
|
ERR13266821
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR13261484
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014605
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR6044909
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4817713
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014610
|
MDR-TB
|
lineage3.1.2
|
None
|
ERR4797513
|
Sensitive
|
lineage3.1.2
|
in
|
SRR7069170
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29230716
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7517750
|
HR-TB
|
lineage3.1.2
|
None
|
ERR13267136
|
Other
|
lineage3.1.2
|
None
|
SRR29230733
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11067947
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25827706
|
Other
|
lineage3.1.2
|
None
|
ERR351869
|
Sensitive
|
lineage3.1.2
|
None
|
SRR6046177
|
Other
|
lineage3.1.2
|
None
|
SRR21733077
|
Sensitive
|
lineage3.1.2
|
None
|
ERR11049270
|
Other
|
lineage3.1.2
|
None
|
SRR29230666
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800192
|
MDR-TB
|
lineage3.1.2
|
in
|
ERR9125803
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800565
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
SRR22249683
|
HR-TB
|
lineage3.1.2
|
None
|
SRR29231438
|
Sensitive
|
lineage3.1.2
|
None
|
SRR15014612
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR29772388
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
SRR2100080
|
Sensitive
|
lineage3.1.2
|
None
|
SRR22175239
|
XDR-TB
|
lineage2.2.1;lineage3.1.2
|
None
|
SRR25340866
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266822
|
Pre-XDR-TB
|
lineage3.1.2
|
None
|
ERR4797887
|
Sensitive
|
lineage3.1.2
|
in
|
ERR270692
|
HR-TB
|
lineage3.1.2
|
None
|
ERR4800137
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29231480
|
Sensitive
|
lineage3.1.2
|
None
|
SRR2100085
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797906
|
HR-TB
|
lineage3.1.2
|
in
|
ERR2514944
|
Sensitive
|
lineage3.1.2
|
gb
|
ERR4816191
|
Other
|
lineage3.1.2
|
gb
|
SRR29231514
|
Sensitive
|
lineage3.1.2
|
None
|
ERR046810
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29096968
|
Sensitive
|
lineage3.1.2
|
None
|
SRR16058111
|
Sensitive
|
lineage3.1.2
|
None
|
SRR7898219
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR13266168
|
Other
|
lineage3.1.2
|
None
|
ERR4796358
|
Other
|
lineage3.1.2;lineage4.1.1.1
|
None
|
ERR228259
|
Sensitive
|
lineage3.1.2
|
None
|
SRR25340746
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4797256
|
Sensitive
|
lineage3.1.2
|
in
|
SRR29049035
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266723
|
Sensitive
|
lineage3.1.2
|
None
|
ERR4800651
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR29231471
|
Sensitive
|
lineage3.1.2
|
None
|
ERR13266830
|
Sensitive
|
lineage3.1.2
|
None
|
ERR330743
|
Sensitive
|
lineage3.1.2
|
None
|
SRR29772572
|
MDR-TB
|
lineage3.1.2
|
None
|