Rv1854c - c.444T>C
Drug resistance types
12 Sensitive
1 RR-TB
58 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| 47 | |
| lineage4.1.2.1 | 3 |
| lineage3.1 | 2 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage4 | 10 |
| lineage4.9 | 5 |
| La1.8.1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.8 | 2 |
| lineage2.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6325442 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR323063 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323039 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283032 | HR-TB | None | ERR1035122 | Sensitive | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR736839 | Other | None | ERR387051 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736872 | Sensitive | lineage4 | None | SRR1174897 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1172310 | HR-TB | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR551069 | HR-TB | lineage4.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675383 | HR-TB | None | ERR4816656 | HR-TB | None | SRR3675558 | HR-TB | None | ERR2229147 | Other | lineage4.8 | None | ERR4816466 | HR-TB | None | SRR3675545 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229802 | Sensitive | lineage4.8 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819396 | Sensitive | lineage4.1.2.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None |
|---|
