Rv1908c - c.-6A>G
Drug resistance types
2 Sensitive
0 RR-TB
3 HR-TB
118 MDR-TB
35 Pre-XDR-TB
16 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 2 |
| lineage4.4.1.1 | 160 |
| lineage2.2.1 | 9 |
| 2 | |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28393415 | MDR-TB | lineage4.3.3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR9971188 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1169148 | MDR-TB | lineage4.4.1.1 | None | SRR9971251 | MDR-TB | lineage4.4.1.1 | None | SRR25206944 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207092 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971105 | XDR-TB | lineage4.4.1.1 | None | ERR4809173 | MDR-TB | lineage4.4.1.1 | za | ERR7737738 | MDR-TB | lineage4.4.1.1 | None | SRR1175074 | Other | None | SRR9971199 | MDR-TB | lineage4.4.1.1 | None | SRR1019153 | MDR-TB | lineage4.4.1.1 | None | SAMN02053774 | MDR-TB | lineage4.4.1.1 | za | ERR7737802 | MDR-TB | lineage4.4.1.1 | None | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | SRR1167342 | MDR-TB | lineage4.4.1.1 | None | ERR9806836 | MDR-TB | lineage4.4.1.1 | None | ERR9992837 | XDR-TB | lineage4.4.1.1 | None | ERR7737788 | MDR-TB | lineage4.4.1.1 | None | SRR1167304 | MDR-TB | lineage4.4.1.1 | None | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1140899 | MDR-TB | lineage4.4.1.1 | None | SRR1173095 | MDR-TB | lineage4.4.1.1 | None | SRR1196486 | MDR-TB | lineage4.4.1.1 | None | SRR25207245 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173786 | MDR-TB | lineage4.4.1.1 | None | SRR847797 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR10748185 | MDR-TB | lineage4.4.1.1 | None | SRR1140924 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02403535 | MDR-TB | lineage4.4.1.1 | za | SRR1196553 | MDR-TB | lineage4.4.1.1 | None | ERR9992983 | XDR-TB | lineage4.4.1.1 | None | ERR4811302 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21732974 | Sensitive | lineage2.2.1 | None | ERR7737904 | MDR-TB | lineage4.4.1.1 | None | SRR1173499 | MDR-TB | lineage4.4.1.1 | None | ERR2515636 | MDR-TB | lineage4.4.1.1 | za | ERR9992643 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1165254 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4830562 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR1034831 | MDR-TB | lineage4.3.4.1 | pt | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | ERR9806649 | MDR-TB | lineage4.4.1.1 | None | SRR1172777 | MDR-TB | lineage4.4.1.1 | None | ERR4809298 | MDR-TB | lineage4.4.1.1 | za | SRR1167345 | MDR-TB | lineage4.4.1.1 | None | ERR4810475 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02403580 | MDR-TB | lineage4.4.1.1 | za | ERR11488438 | HR-TB | lineage4.4.1.1 | None | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | ERR10748274 | MDR-TB | lineage4.4.1.1 | None | ERR13288788 | XDR-TB | lineage4.4.1.1 | None | SRR9971286 | MDR-TB | lineage4.4.1.1 | None | SRR1196558 | MDR-TB | lineage4.4.1.1 | None | SRR1184309 | MDR-TB | lineage4.4.1.1 | None | ERR7911437 | MDR-TB | lineage4.4.1.1 | za | SRR833014 | MDR-TB | lineage4.4.1.1 | None | SAMN02350474 | MDR-TB | lineage4.4.1.1 | za | ERR4830499 | MDR-TB | lineage4.4.1.1 | za | SRR10315532 | MDR-TB | lineage4.4.1.1 | None | SRR1173353 | MDR-TB | lineage4.4.1.1 | None | ERR8975948 | XDR-TB | lineage4.4.1.1 | None | SAMN02053771 | MDR-TB | lineage4.4.1.1 | za | ERR7737920 | MDR-TB | lineage4.4.1.1 | None | SRR9971366 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11488717 | MDR-TB | lineage4.4.1.1 | None | ERR7911446 | MDR-TB | lineage4.4.1.1 | za | SAMN02586002 | MDR-TB | lineage4.4.1.1 | za | ERR7737666 | MDR-TB | lineage4.4.1.1 | None | SRR832997 | MDR-TB | lineage4.4.1.1 | None | ERR9029377 | MDR-TB | lineage4.4.1.1 | None | SRR9971365 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971316 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR26399305 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165266 | MDR-TB | lineage4.4.1.1 | None | ERR7737688 | MDR-TB | lineage4.4.1.1 | None | ERR13289310 | MDR-TB | lineage4.4.1.1 | None | SRR1184384 | MDR-TB | lineage4.4.1.1 | None | ERR7737649 | MDR-TB | lineage4.4.1.1 | None | ERR9993071 | XDR-TB | lineage4.4.1.1 | None | ERR10748445 | MDR-TB | lineage4.4.1.1 | None | ERR10610092 | MDR-TB | lineage4.4.1.1 | None | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR1165244 | MDR-TB | lineage4.4.1.1 | None | ERR7737747 | MDR-TB | lineage4.4.1.1 | None | SRR1196716 | MDR-TB | lineage4.4.1.1 | None | SRR1173321 | MDR-TB | lineage4.4.1.1 | None | ERR11773735 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR10610045 | MDR-TB | lineage4.4.1.1 | None | SRR6856035 | MDR-TB | lineage4.4.1.1 | None | ERR10748268 | MDR-TB | lineage4.4.1.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR1169310 | MDR-TB | lineage4.4.1.1 | None | ERR10748180 | MDR-TB | lineage4.4.1.1 | None | SRR29056148 | MDR-TB | lineage4.4.1.1 | None | SAMN02586037 | MDR-TB | lineage4.4.1.1 | za | SRR1173595 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR833117 | MDR-TB | lineage4.4.1.1 | None | SRR9971027 | MDR-TB | lineage4.4.1.1 | None | ERR7737843 | MDR-TB | lineage4.4.1.1 | None | SRR1167344 | MDR-TB | lineage4.4.1.1 | None | SRR1173545 | Sensitive | lineage4.4.1.1 | None | SRR25515755 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173317 | MDR-TB | lineage4.4.1.1 | None | ERR13289309 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR25207302 | MDR-TB | lineage4.5 | None | SRR1184317 | MDR-TB | lineage4.4.1.1 | None | ERR10748224 | MDR-TB | lineage4.4.1.1 | None | SRR833017 | MDR-TB | lineage4.4.1.1 | None | SRR832977 | MDR-TB | lineage4.4.1.1 | None | ERR11773748 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR7911438 | MDR-TB | lineage4.4.1.1 | za | SRR1167376 | MDR-TB | lineage4.4.1.1 | None | SRR1167324 | MDR-TB | lineage4.4.1.1 | None | SRR1172353 | MDR-TB | lineage4.4.1.1 | None | SRR9971052 | MDR-TB | lineage4.4.1.1 | None | SRR9971177 | MDR-TB | lineage4.4.1.1 | None | SRR1173782 | MDR-TB | lineage4.4.1.1 | None | SRR1167316 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9992789 | XDR-TB | lineage4.4.1.1 | None | SRR833018 | MDR-TB | lineage4.4.1.1 | None | SAMN02586000 | MDR-TB | lineage4.4.1.1 | za | SAMN01925652 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971191 | MDR-TB | lineage4.4.1.1 | None | ERR10748259 | MDR-TB | lineage4.4.1.1 | None | ERR7911203 | MDR-TB | lineage4.4.1.1 | za | ERR9992632 | XDR-TB | lineage4.4.1.1 | None | SAMN02053755 | MDR-TB | lineage4.4.1.1 | za | ERR11488976 | MDR-TB | lineage4.4.1.1 | None | ERR11488919 | MDR-TB | lineage4.4.1.1 | None | SRR1165668 | MDR-TB | lineage4.4.1.1 | None | ERR4830490 | MDR-TB | lineage4.4.1.1 | za | SRR1165653 | MDR-TB | lineage4.4.1.1 | None | SRR1169314 | MDR-TB | lineage4.4.1.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | ERR2515242 | MDR-TB | lineage4.4.1.1 | za | SRR9971130 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR10748251 | MDR-TB | lineage4.4.1.1 | None | ERR9993129 | XDR-TB | lineage4.4.1.1 | None | SRR1165620 | MDR-TB | lineage4.4.1.1 | None | SAMN02403515 | MDR-TB | lineage4.4.1.1 | za | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SAMN02403514 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02586004 | MDR-TB | lineage4.4.1.1 | za | ERR9992640 | XDR-TB | lineage4.4.1.1 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | SRR1173339 | MDR-TB | lineage4.4.1.1 | None | SRR924221 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971171 | MDR-TB | lineage4.4.1.1 | None | ERR4810971 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1175355 | MDR-TB | lineage4.4.1.1 | None | ERR4830561 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR10315463 | MDR-TB | lineage4.4.1.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR11488439 | MDR-TB | lineage4.4.1.1 | None | ERR11774892 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1173187 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9993107 | XDR-TB | lineage4.4.1.1 | None | SRR1173150 | MDR-TB | lineage4.4.1.1 | None | ERR8975512 | XDR-TB | lineage4.4.1.1 | None | ERR4812149 | HR-TB | lineage4.3.3 | pe | ERR11774887 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992627 | XDR-TB | lineage4.4.1.1 | None | SRR10315616 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13288934 | XDR-TB | lineage4.4.1.1 | None | ERR13289266 | MDR-TB | lineage4.4.1.1 | None | SAMN02350492 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR10315510 | MDR-TB | lineage4.4.1.1 | None | SRR1173063 | HR-TB | lineage4.4.1.1 | None | SRR1184372 | MDR-TB | None | SRR1165645 | MDR-TB | lineage4.4.1.1 | None | SAMN02403581 | MDR-TB | lineage4.4.1.1 | za |
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