Rv1908c - c.421_423delTTGinsCTC


Drug resistance types
6 Sensitive 1 RR-TB 77 HR-TB 27 MDR-TB 34 Pre-XDR-TB 0 XDR-TB 3 Other
lineage Counts
lineage Count
lineage4.9 15
lineage4.8 2
18
lineage2.2.2 19
lineage4 13
lineage3 5
lineage2.2.1 34
lineage2.2.2;lineage2.2.1 2
lineage4.4.2 5
lineage1.1.1 1
lineage4.5 3
lineage2.2.1.1 2
lineage4.9;lineage4.2.1 1
lineage4.1.1.3 1
lineage4.8.1 1
lineage4.7 1
lineage2.2 23
lineage4;lineage2.2.2 1
lineage4.9;lineage2 1
spoligotype Counts
spoligotype Count
None 148
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173185 HR-TB lineage4.9 None
SRR1184329 MDR-TB lineage4.9 None
SRR16156804 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR19303813 HR-TB lineage4.8 None
SRR3675456 HR-TB None
SAMN02360583 HR-TB lineage2.2.2 None
SRR3675280 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4 None
SRR3675284 HR-TB lineage4.9 None
ERR4816470 Other lineage3 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR3675555 HR-TB None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360586 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SAMN02360574 HR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02398710 MDR-TB lineage2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SAMN02360577 HR-TB lineage3 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4819314 Other lineage1.1.1 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02360585 HR-TB lineage4.5 None
ERR1023509 Other None
SRR6045795 HR-TB lineage2.2.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR4821655 Sensitive lineage4 None
ERR4821747 MDR-TB lineage4.9;lineage4.2.1 None
SRR6045359 Sensitive lineage4.9 None
SRR6044897 Sensitive lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3445501 HR-TB None
SRR6046395 HR-TB lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR3283013 MDR-TB lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3445502 HR-TB lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR3797063 HR-TB None
ERR387051 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4798823 HR-TB lineage4 None
ERR5918097 Sensitive lineage4.8.1 za
ERR5987263 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4 None
ERR987707 MDR-TB lineage4.7 None
ERR736856 HR-TB lineage4 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013584 HR-TB lineage2.2 None
SRR1013597 HR-TB lineage2.2 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013596 HR-TB lineage3 None
SRR1013595 HR-TB lineage3 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013598 HR-TB None
SRR1013599 HR-TB None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013607 HR-TB lineage2.2 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013608 HR-TB lineage2.2 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013614 HR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013612 HR-TB lineage4 None
SRR1013611 HR-TB lineage4 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013618 MDR-TB None
SRR1013634 MDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1013633 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048885 MDR-TB None
SRR1048886 MDR-TB lineage2.2 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048982 HR-TB None
SRR1048980 HR-TB lineage3 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048983 HR-TB None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048996 HR-TB lineage4.5 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048994 HR-TB lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
SRR1048995 HR-TB lineage4.5 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049027 Pre-XDR-TB None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049023 HR-TB lineage2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1049041 MDR-TB None