Rv1908c - c.421_423delTTGinsCTC
Drug resistance types
4 Sensitive
0 RR-TB
36 HR-TB
4 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| lineage2.2.1 | 19 |
| lineage2.2.2 | 13 |
| lineage4.9 | 6 |
| lineage3 | 3 |
| lineage2.2.2;lineage4 | 2 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4 | 2 |
| lineage4.4.2 | 2 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage2.2.2;lineage4.9 | 2 |
| lineage4.9;lineage7 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4 | 1 |
| lineage2.2;lineage4.9 | 2 |
| lineage4.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR1023509 | Other | lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1048981 | HR-TB | lineage3 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1144759 | HR-TB | lineage2.2.2;lineage4 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage2.2.2;lineage4.9 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048852 | HR-TB | lineage2.2;lineage4.9 | None | SRR1048988 | HR-TB | lineage2.2.1 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | ERR5918097 | Sensitive | lineage4.8.1 | za | SRR1048965 | HR-TB | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None |
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