lineage | Count |
---|---|
lineage2.2.1 | 40 |
lineage1.2.1.1 | 1 |
lineage1.2.1.2.1 | 4 |
lineage1.2.2.2 | 2 |
lineage3 | 5 |
lineage4.1.2.1 | 2 |
lineage4.2.2.2 | 2 |
lineage4.3.3 | 1 |
La3 | 4 |
lineage4.5;lineage4.4 | 1 |
lineage4.9 | 2 |
La1.7.1 | 4 |
lineage4.1.1 | 1 |
lineage1.2.1.2 | 1 |
lineage1 | 1 |
2 | |
lineage1.1.2 | 4 |
lineage4.5 | 4 |
lineage4.4.2 | 2 |
lineage3.1.1 | 1 |
lineage4.8 | 26 |
lineage4.1.2 | 2 |
lineage4 | 1 |
lineage1.1.1.1 | 1 |
lineage4.1.4 | 1 |
lineage4.3.2 | 1 |
lineage4.6.2.2 | 1 |
lineage2.2.1.1 | 2 |
lineage4.2.1 | 1 |
lineage4.3.3;lineage4.2.1 | 1 |
La1.8.1 | 2 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | ERR5865331 | Pre-XDR-TB | lineage2.2.1 | None | ERR6397149 | Sensitive | lineage1.2.1.1 | None | ERR5865639 | MDR-TB | lineage2.2.1 | None | ERR6336730 | HR-TB | lineage1.2.1.2.1 | None | ERR6336749 | Sensitive | lineage1.2.1.2.1 | None | ERR5908261 | Sensitive | lineage1.2.2.2 | None | ERR6336772 | Sensitive | lineage1.2.1.2.1 | None | ERR6397177 | Sensitive | lineage3 | None | ERR6397167 | MDR-TB | lineage4.1.2.1 | None | ERR6397181 | Sensitive | lineage4.1.2.1 | None | ERR6397155 | HR-TB | lineage3 | None | ERR6397217 | Sensitive | lineage4.2.2.2 | None | ERR6397205 | MDR-TB | lineage3 | None | ERR8975563 | HR-TB | lineage2.2.1 | None | ERR8975605 | MDR-TB | lineage4.3.3 | None | ERR9121351 | Sensitive | lineage3 | None | ERR9125828 | Sensitive | La3 | None | SRR10305710 | Sensitive | lineage4.5;lineage4.4 | None | ERR9896105 | Sensitive | lineage1.2.2.2 | None | SRR11823427 | Sensitive | lineage4.9 | None | SRR11418326 | Other | La1.7.1 | None | SRR11972162 | HR-TB | lineage4.1.1 | None | SRR12882114 | Sensitive | lineage1.2.1.2 | None | SRR12199427 | Sensitive | lineage1 | None | SRR12199455 | Other | None | SRR12882538 | Sensitive | lineage1.1.2 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR15315806 | Sensitive | lineage2.2.1 | None | SRR15723272 | Sensitive | lineage4.5 | None | SRR12882673 | Sensitive | lineage1.1.2 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295734 | Other | lineage2.2.1 | None | SRR16295739 | Other | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16295789 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295796 | Sensitive | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295805 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR21277786 | Sensitive | lineage4.4.2 | None | SRR16295827 | Sensitive | lineage2.2.1 | None | SRR17163490 | MDR-TB | lineage3.1.1 | None | SRR2101161 | Sensitive | La3 | None | SRR21277209 | Sensitive | lineage2.2.1 | None | SRR16295823 | Sensitive | lineage2.2.1 | None | SRR22424900 | HR-TB | lineage1.1.2 | None | SRR21576568 | MDR-TB | lineage2.2.1 | None | ERR11082009 | Sensitive | lineage4.8 | None | ERR11068009 | Sensitive | lineage4.5 | None | ERR11081010 | Other | lineage4.1.2 | None | ERR11082080 | MDR-TB | lineage4.8 | None | ERR11082347 | MDR-TB | lineage4.8 | None | ERR9806885 | Pre-XDR-TB | lineage2.2.1 | None | SRR24061597 | Sensitive | None | ERR2229551 | Sensitive | lineage4.8 | None | SRR21887720 | Pre-XDR-TB | lineage2.2.1 | None | ERR1577251 | Sensitive | lineage2.2.1 | None | ERR1465965 | Sensitive | lineage4.8 | rs | ERR2229437 | Other | lineage4.8 | None | ERR2229094 | Sensitive | lineage4.8 | dk | ERR1950087 | Sensitive | lineage4.8 | dk | ERR2229134 | HR-TB | lineage4.8 | None | ERR2229190 | Sensitive | lineage4.8 | None | ERR2229620 | Sensitive | lineage4.8 | None | ERR2229686 | Sensitive | lineage4.8 | None | ERR2229499 | Sensitive | lineage4 | None | ERR4817441 | Sensitive | lineage4.2.2.2 | None | ERR2228827 | Sensitive | lineage4.8 | None | SRR5073584 | Sensitive | lineage1.1.1.1 | vn | ERR3275820 | Sensitive | lineage4.8 | nl | ERR2510705 | Pre-XDR-TB | lineage4.8 | it | SRR5073783 | Sensitive | lineage2.2.1 | vn | ERR4818287 | Other | lineage4.5 | gb | SRR5067652 | Sensitive | lineage4.4.2 | vn | ERR2514488 | Sensitive | lineage4.8 | gb | ERR2513912 | Other | lineage4.5 | gb | ERR2516557 | Pre-XDR-TB | lineage4.1.4 | pe | ERR2516348 | Sensitive | lineage4.8 | be | SRR5341221 | Sensitive | lineage1.1.2 | None | ERR2517051 | Sensitive | lineage2.2.1 | gb | SRR1723661 | MDR-TB | lineage2.2.1 | cn | ERR2515051 | Sensitive | La3 | None | ERR551238 | MDR-TB | lineage4.8 | de | ERR2653096 | MDR-TB | lineage4.3.2 | None | ERR4829005 | Pre-XDR-TB | lineage4.8 | None | ERR2679280 | Sensitive | lineage4.6.2.2 | None | ERR4829520 | Sensitive | lineage4.8 | it | ERR2653194 | Pre-XDR-TB | lineage4.1.2 | None | SRR6152675 | Sensitive | lineage1.2.1.2.1 | ca | SRR6832027 | Sensitive | lineage2.2.1 | None | ERR495199 | Sensitive | lineage2.2.1.1 | None | SRR7592347 | Pre-XDR-TB | lineage4.8 | None | SRR6832698 | Sensitive | lineage4.2.1 | None | SRR6797755 | HR-TB | lineage2.2.1.1 | None | SRR6824704 | MDR-TB | lineage2.2.1 | cn | SRR9940979 | Sensitive | lineage4.9 | None | SRR7851380 | Other | La1.7.1 | None | SRR9738484 | MDR-TB | lineage4.8 | None | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | SRR7851310 | Other | La1.7.1 | None | DRR034482 | Sensitive | lineage2.2.1 | None | ERR10877890 | Pre-XDR-TB | lineage2.2.1 | None | ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None | ERR10877882 | MDR-TB | lineage4.3.3;lineage4.2.1 | None | ERR10877863 | MDR-TB | lineage2.2.1 | None | ERR10877869 | MDR-TB | lineage2.2.1 | None | ERR11043656 | MDR-TB | lineage4.8 | None | ERR11043105 | Sensitive | lineage4.8 | None | ERR11044679 | Sensitive | lineage2.2.1 | None | ERR330723 | Sensitive | La3 | None | ERR11044697 | Sensitive | lineage4.8 | None | ERR4195774 | Sensitive | lineage3 | None | ERR11049431 | Sensitive | lineage4.8 | None | ERR4450961 | Other | La1.7.1 | None | ERR4627376 | Other | La1.8.1 | None | ERR4627310 | Other | La1.8.1 | None |
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