lineage | Count |
---|---|
lineage4.3.3 | 10 |
lineage4.8 | 32 |
lineage2.2.1 | 31 |
La3;M.canetti | 9 |
lineage4.5 | 5 |
La1.7.1 | 2 |
lineage4.4 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.2.1.1 | 2 |
lineage3 | 2 |
lineage4.4.2 | 2 |
La3 | 4 |
M.canetti | 9 |
lineage1.2.2.2 | 1 |
lineage4.1.4 | 1 |
lineage4.3.2.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.2.1;lineage4.3.3 | 1 |
lineage1.1.2 | 2 |
lineage6.3.1 | 1 |
lineage4.4;lineage4.5 | 1 |
lineage4.4.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 121 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR10877880 | MDR-TB | lineage4.3.3 | None |
ERR11043105 | Sensitive | lineage4.8 | None |
SRR21576568 | MDR-TB | lineage2.2.1 | None |
SRR29127101 | Sensitive | lineage4.8 | None |
ERR1043164 | Other | La3;M.canetti | None |
ERR11044697 | Sensitive | lineage4.8 | None |
ERR1336826 | Sensitive | La3;M.canetti | None |
SRR7069959 | Other | lineage4.5 | None |
SRR7851380 | Other | La1.7.1 | None |
SRR21277209 | Sensitive | lineage2.2.1 | None |
SRR28351587 | Sensitive | lineage4.4 | None |
SRR6152675 | Sensitive | lineage1.2.1.2.1 | ca |
ERR12544390 | RR-TB | lineage4.2.1.1 | None |
ERR2516348 | Sensitive | lineage4.8 | be |
ERR9121351 | Sensitive | lineage3 | None |
SRR16295785 | Other | lineage2.2.1 | None |
ERR10868625 | Pre-XDR-TB | lineage4.3.3 | None |
SRR5067652 | Sensitive | lineage4.4.2 | vn |
SRR5073783 | Sensitive | lineage2.2.1 | vn |
ERR10877893 | MDR-TB | lineage4.3.3 | None |
ERR2229094 | Sensitive | lineage4.8 | dk |
SRR16057940 | Sensitive | La3 | None |
SRR7070338 | Sensitive | lineage4.8 | None |
ERR551179 | Sensitive | M.canetti | None |
ERR9896105 | Sensitive | lineage1.2.2.2 | None |
SRR10040292 | MDR-TB | lineage2.2.1 | None |
SRR29124321 | Sensitive | lineage4.8 | None |
SRR28394020 | XDR-TB | lineage4.1.4 | None |
SRR29273805 | MDR-TB | lineage4.8 | None |
SRR29385463 | MDR-TB | lineage2.2.1 | None |
SRR12062513 | MDR-TB | lineage2.2.1 | None |
SRR12062512 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13093824 | Sensitive | lineage4.3.2.1 | None |
SRR16295734 | Sensitive | lineage2.2.1 | None |
ERR11043656 | MDR-TB | lineage4.8 | None |
ERR551181 | Sensitive | M.canetti | None |
ERR12544261 | Sensitive | lineage4.3.3 | None |
ERR10877890 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11044679 | Sensitive | lineage2.2.1 | None |
ERR11082347 | MDR-TB | lineage4.8 | None |
ERR1336821 | Sensitive | La3;M.canetti | None |
ERR330723 | Other | La3 | None |
ERR1043163 | Other | La3;M.canetti | None |
ERR1336823 | Sensitive | La3;M.canetti | None |
ERR551238 | MDR-TB | lineage4.8 | de |
SRR2101161 | Sensitive | La3 | None |
ERR4818287 | RR-TB | lineage4.5 | gb |
ERR2513912 | Sensitive | lineage4.5 | gb |
ERR266121 | Sensitive | M.canetti | None |
ERR266122 | Sensitive | La3;M.canetti | None |
ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None |
SRR21887720 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7851310 | Other | La1.7.1 | None |
SRR5073584 | Sensitive | lineage1.1.1.1 | vn |
SRR1723661 | MDR-TB | lineage2.2.1 | cn |
ERR11082080 | MDR-TB | lineage4.8 | None |
SRR7592347 | Pre-XDR-TB | lineage4.8 | None |
ERR3275820 | Sensitive | lineage4.8 | nl |
ERR2510705 | Pre-XDR-TB | lineage4.8 | it |
SRR15315806 | Sensitive | lineage2.2.1 | None |
SRR24083722 | Sensitive | lineage2.2.1 | None |
ERR9125828 | Sensitive | La3 | None |
SRR28119798 | Other | lineage2.2.1 | None |
SRR10522783 | Sensitive | M.canetti | None |
ERR12545823 | RR-TB | lineage4.8 | None |
ERR3597004 | Sensitive | M.canetti | None |
ERR11049431 | Sensitive | lineage4.8 | None |
ERR551182 | Sensitive | M.canetti | None |
ERR10877869 | MDR-TB | lineage2.2.1 | None |
ERR1336824 | Sensitive | La3;M.canetti | None |
ERR12549777 | RR-TB | lineage4.8 | None |
ERR10877882 | MDR-TB | lineage4.2.1;lineage4.3.3 | None |
ERR12544298 | RR-TB | lineage4.8 | None |
SRR15723272 | Sensitive | lineage4.5 | None |
SRR28119844 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10868931 | MDR-TB | lineage2.2.1 | None |
SRR21732866 | Sensitive | lineage1.1.2 | None |
ERR12544442 | RR-TB | lineage4.8 | None |
ERR10680062 | RR-TB | lineage6.3.1 | None |
ERR12544262 | RR-TB | lineage4.2.1.1 | None |
ERR4829005 | Pre-XDR-TB | lineage4.8 | None |
SRR29126379 | Sensitive | lineage4.8 | None |
ERR1336820 | Sensitive | La3;M.canetti | None |
SRR29093252 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10305710 | Sensitive | lineage4.4;lineage4.5 | None |
ERR9806885 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11068009 | Sensitive | lineage4.5 | None |
ERR4195774 | Sensitive | lineage3 | None |
ERR13260198 | MDR-TB | lineage2.2.1 | None |
ERR551180 | Sensitive | M.canetti | None |
SRR28646093 | MDR-TB | lineage4.8 | None |
ERR10877891 | MDR-TB | lineage4.3.3 | None |
ERR1465965 | Sensitive | lineage4.8 | rs |
ERR4829520 | Sensitive | lineage4.8 | it |
ERR8975563 | HR-TB | lineage2.2.1 | None |
ERR8975605 | MDR-TB | lineage4.3.3 | None |
SRR6824704 | MDR-TB | lineage2.2.1 | cn |
ERR10868185 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28119760 | Pre-XDR-TB | lineage2.2.1 | None |
ERR12916927 | XDR-TB | lineage4.3.3 | None |
SRR21277786 | Sensitive | lineage4.4.2 | None |
DRR473965 | Sensitive | lineage2.2.1 | None |
ERR12544388 | Sensitive | lineage4.8 | None |
ERR11465378 | Sensitive | lineage4.4.1.1 | None |
SRR10522763 | Sensitive | M.canetti | None |
ERR1336822 | Sensitive | M.canetti | None |
SRR12882538 | Sensitive | lineage1.1.2 | None |
SRR29127001 | Sensitive | lineage4.8 | None |
ERR1336825 | Sensitive | La3;M.canetti | None |
ERR12545821 | Sensitive | lineage4.3.3 | None |
SRR22249787 | Sensitive | lineage2.2.1 | None |
ERR12544386 | Sensitive | lineage4.2.1 | None |
ERR12544297 | Sensitive | lineage4.3.3 | None |
ERR11082009 | Sensitive | lineage4.8 | None |
ERR10877870 | Pre-XDR-TB | lineage4.3.3 | None |
ERR10877863 | MDR-TB | lineage2.2.1 | None |
SRR29126574 | Sensitive | lineage4.8 | None |
SRR21691098 | Sensitive | lineage4.8 | None |
ERR10877894 | MDR-TB | lineage2.2.1 | None |
SRR29127085 | Sensitive | lineage4.8 | None |
SRR9738484 | MDR-TB | lineage4.8 | None |