Rv1979c - c.-154A>G
Drug resistance types
107 Sensitive
3 RR-TB
20 HR-TB
19 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1 | 98 |
| M.canetti | 65 |
| lineage2.2.1.1 | 4 |
| lineage6.3.1 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La3;M.canetti | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5074182 | Sensitive | lineage2.1 | vn | SRR5818614 | Sensitive | M.canetti | dj | ERR4815361 | Other | M.canetti | None | SRR5073902 | Other | lineage2.1 | vn | ERR266108 | Sensitive | M.canetti | None | SRR5065619 | Other | lineage2.1 | vn | ERR313113 | Other | M.canetti | None | ERR552307 | Sensitive | M.canetti | None | ERR3273198 | MDR-TB | lineage2.1 | None | ERR7737678 | MDR-TB | lineage2.1 | None | ERR025881 | Sensitive | lineage2.1 | None | ERR4828364 | HR-TB | lineage2.1 | None | ERR9125480 | Sensitive | M.canetti | None | ERR313117 | Other | M.canetti | None | SRR10809026 | MDR-TB | lineage2.1 | None | SRR12006591 | Sensitive | lineage2.1 | None | SRR18289196 | Sensitive | M.canetti | None | ERR266120 | Sensitive | M.canetti | None | SRR20969515 | HR-TB | lineage2.1 | None | SRR16058674 | Other | M.canetti | None | ERR9125475 | Other | M.canetti | None | ERR266109 | Sensitive | M.canetti | None | SRR5074136 | Sensitive | lineage2.1 | vn | ERR7911125 | RR-TB | lineage2.1 | vn | SRR14519150 | Sensitive | lineage2.2.1.1 | None | SRR21690953 | Sensitive | lineage2.1 | None | ERR551182 | Sensitive | M.canetti | None | SRR26399764 | Sensitive | lineage2.1 | None | SRR26399621 | Sensitive | lineage2.1 | None | SRR5065604 | Sensitive | lineage2.1 | vn | SRR8237298 | Sensitive | lineage2.1 | ch | SRR26399765 | Sensitive | lineage2.1 | None | ERR3804127 | Sensitive | lineage6.3.1 | None | SRR5817473 | MDR-TB | lineage2.1 | au | SRR29051417 | HR-TB | lineage2.1 | None | ERR4831637 | MDR-TB | lineage2.1 | vn | SRR5067408 | HR-TB | lineage2.1 | vn | SRR5073656 | Sensitive | lineage2.1 | vn | SRR26399879 | Other | lineage2.1 | None | SRR22179528 | Sensitive | M.canetti | None | SRR24061597 | Sensitive | M.canetti | None | ERR3597005 | Sensitive | M.canetti | None | SRR22251890 | Sensitive | lineage2.1 | None | SRR22249862 | Sensitive | lineage2.1 | None | ERR313116 | Sensitive | M.canetti | None | ERR551179 | Sensitive | M.canetti | None | ERR4821046 | Sensitive | M.canetti | None | SRR30182595 | Sensitive | lineage2.1 | None | SRR29440579 | Sensitive | lineage2.1 | None | ERR552304 | Sensitive | M.canetti | None | SRR5818567 | Other | M.canetti | dj | ERR551055 | Sensitive | M.canetti | None | SRR8237361 | Sensitive | lineage2.1 | None | SRR5067554 | Other | lineage2.1 | vn | SRR22249459 | Sensitive | lineage2.1 | None | SRR5073866 | Sensitive | lineage2.1 | vn | SRR26399834 | HR-TB | lineage2.1 | None | ERR3597002 | Other | M.canetti | None | DRR185119 | Sensitive | lineage2.1 | vn | SRR5065487 | Sensitive | lineage2.1 | vn | ERR4830275 | Sensitive | lineage2.1 | vn | ERR4831605 | MDR-TB | lineage2.1 | vn | ERR4831730 | HR-TB | lineage2.1 | vn | SRR13180316 | HR-TB | lineage2.1 | None | SRR5067550 | Other | lineage2.1 | vn | SRR10809073 | Sensitive | lineage2.1 | None | SRR5065563 | Sensitive | lineage2.1 | vn | ERR3597007 | Sensitive | M.canetti | None | ERR551181 | Sensitive | M.canetti | None | ERR7451300 | Sensitive | M.canetti | None | SRR5065617 | Sensitive | lineage2.1 | vn | SRR5065678 | Sensitive | lineage2.1 | vn | SRR28170771 | Sensitive | lineage2.1 | None | ERR7911277 | MDR-TB | lineage2.1 | vn | SRR10177263 | Sensitive | M.canetti | None | SRR5818661 | Other | M.canetti | dj | SRR5818676 | Other | M.canetti | dj | SRR24061598 | Sensitive | M.canetti | None | SRR6280142 | Sensitive | lineage2.2.1.1 | cn | ERR9119371 | Sensitive | lineage2.1 | None | ERR552306 | Sensitive | M.canetti;lineage4.9 | None | SRR5073921 | Sensitive | lineage2.1 | vn | SRR10177260 | Other | M.canetti | None | SRR28170812 | Sensitive | M.canetti | None | SRR5818605 | Other | M.canetti | None | DRR184642 | Sensitive | lineage2.1 | vn | ERR7911475 | RR-TB | lineage2.1 | vn | ERR7911509 | MDR-TB | lineage2.1 | vn | ERR234216 | Sensitive | lineage2.1 | None | ERR9787194 | Sensitive | lineage6.3.1 | None | SRR10177262 | Sensitive | M.canetti | None | SRR5073499 | Sensitive | lineage2.1 | vn | ERR4830363 | HR-TB | lineage2.1 | vn | ERR4830397 | HR-TB | lineage2.1 | vn | ERR9119326 | HR-TB | lineage2.1 | None | ERR3597003 | Sensitive | M.canetti | None | SRR5074054 | HR-TB | lineage2.1 | vn | SRR6325456 | Other | lineage2.1 | us | SRR5067580 | Sensitive | lineage2.1 | vn | ERR7737924 | MDR-TB | lineage2.1 | None | SRR5065441 | Sensitive | lineage2.1 | vn | SRR6280139 | Sensitive | lineage2.2.1.1 | cn | SRR5067642 | Sensitive | lineage2.1 | vn | SRR5067683 | HR-TB | lineage2.1 | vn | SRR5067285 | Sensitive | lineage2.1 | vn | SRR5067461 | HR-TB | lineage2.1 | vn | ERR4830396 | MDR-TB | lineage2.1 | vn | ERR266107 | Other | M.canetti | None | SRR5073838 | Sensitive | lineage2.1 | vn | DRR261132 | HR-TB | lineage2.1 | None | SRR6650709 | Sensitive | M.canetti | None | SRR29051076 | Sensitive | lineage2.1 | None | SRR10177261 | Sensitive | M.canetti | None | ERR551056 | Sensitive | M.canetti | None | ERR266110 | Other | M.canetti | None | SRR10177259 | Other | M.canetti | None | SRR5065418 | Sensitive | lineage2.1 | vn | SRR10522783 | Sensitive | M.canetti | None | ERR3275732 | Sensitive | lineage2.1 | nl | ERR313115 | Other | M.canetti | None | ERR551057 | Other | M.canetti | None | ERR266106 | Sensitive | M.canetti | None | ERR4828247 | HR-TB | lineage2.1 | vn | SRR5065411 | HR-TB | lineage2.1 | vn | SRR18289195 | Sensitive | M.canetti | None | SRR5818652 | Sensitive | M.canetti | dj | SRR5818653 | Sensitive | M.canetti | dj | ERR3273195 | MDR-TB | lineage2.1 | None | SRR29464869 | Sensitive | lineage2.1 | None | SRR5065278 | Sensitive | lineage2.1 | vn | SRR26399309 | MDR-TB | lineage2.1 | None | ERR9119325 | MDR-TB | lineage2.1 | None | ERR7911304 | MDR-TB | lineage2.1 | vn | ERR4816126 | Sensitive | lineage4.4.1.2 | gb | SRR22250173 | Sensitive | lineage2.1 | None | SRR26399738 | HR-TB | lineage2.1 | None | SRR29050781 | HR-TB | lineage2.1 | None | SRR10177258 | Other | M.canetti | None | ERR552305 | Sensitive | M.canetti | None | ERR7451301 | Sensitive | M.canetti | None | SRR26937040 | MDR-TB | lineage2.1 | None | SRR8237370 | Sensitive | lineage2.1 | None | SRR26399189 | Sensitive | lineage2.1 | None | SRR26937143 | MDR-TB | lineage2.1 | None | SRR26936969 | MDR-TB | lineage2.1 | None | ERR551180 | Sensitive | M.canetti | None | SRR5073995 | Sensitive | lineage2.1 | vn | ERR9119231 | HR-TB | lineage2.1 | None | SRR6280141 | Sensitive | lineage2.2.1.1 | cn | SRR5067475 | Sensitive | lineage2.1 | vn | SRR26399167 | HR-TB | lineage2.1 | None | SRR29440797 | Sensitive | lineage2.1 | None | ERR4817181 | Sensitive | M.canetti | None | SRR30180480 | MDR-TB | lineage2.1 | None | SRR30180343 | MDR-TB | lineage2.1 | None | ERR313114 | Sensitive | M.canetti | None | SRR5818668 | Sensitive | M.canetti | dj | SRR5818685 | Sensitive | M.canetti | None | ERR266121 | Sensitive | M.canetti | None | SRR5073883 | Sensitive | lineage2.1 | vn | SRR24061599 | Sensitive | M.canetti | None | SRR24061600 | Sensitive | M.canetti | None | ERR266122 | Sensitive | La3;M.canetti | None | ERR4819927 | Sensitive | M.canetti | None | SRR5067713 | Sensitive | lineage2.1 | vn | SRR26937132 | RR-TB | lineage2.1 | None | ERR3597001 | Sensitive | M.canetti | None | ERR1336822 | Sensitive | M.canetti | None | SRR14520114 | Sensitive | lineage2.1 | None | ERR3597004 | Sensitive | M.canetti | None | SRR10522763 | Sensitive | M.canetti | None | SRR16058668 | Sensitive | M.canetti | None |
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