Rv2043c - p.Ala102Val
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
23 HR-TB
227 MDR-TB
39 Pre-XDR-TB
16 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 29 |
| lineage4.4.1.1 | 163 |
| lineage4.2.2.2 | 16 |
| lineage4.3.3 | 73 |
| lineage4.8 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3 | 3 |
| lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2 | 3 |
| lineage4.2.2.1 | 6 |
| lineage2.2.2 | 1 |
| lineage4.1.3 | 2 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.7 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 306 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4830413 | MDR-TB | lineage2.2.1 | vn | ERR4831923 | MDR-TB | lineage2.2.1 | vn | ERR4830499 | MDR-TB | lineage4.4.1.1 | za | ERR4830561 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4830562 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4830793 | MDR-TB | lineage4.2.2.2 | et | ERR5917967 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR4830840 | MDR-TB | lineage4.2.2.2 | et | SRR1184317 | MDR-TB | lineage4.4.1.1 | None | ERR10748224 | MDR-TB | lineage4.4.1.1 | None | SRR1196558 | MDR-TB | lineage4.4.1.1 | None | ERR8975948 | XDR-TB | lineage4.4.1.1 | None | ERR2515242 | MDR-TB | lineage4.4.1.1 | za | ERR2515636 | MDR-TB | lineage4.4.1.1 | za | SRR1165645 | MDR-TB | lineage4.4.1.1 | None | SRR847797 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02350474 | MDR-TB | lineage4.4.1.1 | za | SAMN02586000 | MDR-TB | lineage4.4.1.1 | za | SAMN02586004 | MDR-TB | lineage4.4.1.1 | za | SRR29051028 | MDR-TB | lineage4.3.3 | None | SRR9971188 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR10680056 | MDR-TB | lineage4.8 | None | SAMN02403514 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02403515 | MDR-TB | lineage4.4.1.1 | za | SRR5067558 | MDR-TB | lineage2.2.1 | vn | SRR833014 | MDR-TB | lineage4.4.1.1 | None | SRR1173782 | MDR-TB | lineage4.4.1.1 | None | SRR3544725 | MDR-TB | lineage2.2.1 | None | SRR9224954 | MDR-TB | lineage4.3.3 | None | SRR10315532 | MDR-TB | lineage4.4.1.1 | None | ERR027448 | MDR-TB | lineage2.2.1 | ru | ERR13289266 | MDR-TB | lineage4.4.1.1 | None | SRR1173353 | MDR-TB | lineage4.4.1.1 | None | ERR9993129 | XDR-TB | lineage4.4.1.1 | None | ERR13288788 | XDR-TB | lineage4.4.1.1 | None | ERR8975509 | XDR-TB | lineage4.4.1.1 | None | SRR1169314 | MDR-TB | lineage4.4.1.1 | None | ERR1034650 | HR-TB | lineage4.3.3 | br | SRR6484996 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR9224973 | MDR-TB | lineage4.3.3 | None | SRR1165266 | MDR-TB | lineage4.4.1.1 | None | SRR1140899 | MDR-TB | lineage4.4.1.1 | None | ERR9119447 | MDR-TB | lineage2.2.1 | None | SRR29051547 | MDR-TB | lineage4.3.3 | None | SRR1196486 | MDR-TB | lineage4.4.1.1 | None | SRR9971130 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9224995 | MDR-TB | lineage4.3.3 | None | SRR29539650 | Pre-XDR-TB | lineage4.3.3 | None | ERR13261892 | MDR-TB | lineage4.3.3 | None | SRR29051284 | MDR-TB | lineage4.3.3 | None | SRR29051335 | HR-TB | lineage4.3.3 | None | ERR10748185 | MDR-TB | lineage4.4.1.1 | None | ERR7737722 | MDR-TB | lineage4.2.2.2 | None | SRR13449599 | MDR-TB | lineage4.3.3 | None | ERR1034651 | MDR-TB | lineage4.3.3 | br | SRR1140924 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29051243 | HR-TB | lineage4.3.3 | None | SRR1184385 | MDR-TB | lineage4.4.1.1 | None | ERR13288934 | XDR-TB | lineage4.4.1.1 | None | SRR924221 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971171 | MDR-TB | lineage4.4.1.1 | None | SRR13449603 | HR-TB | lineage4.3.3 | None | SRR1173499 | MDR-TB | lineage4.4.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR29050653 | MDR-TB | lineage4.3.3 | None | SRR13449601 | MDR-TB | lineage4.3.3 | None | ERR7737747 | MDR-TB | lineage4.4.1.1 | None | ERR4276870 | MDR-TB | lineage4.2.2.2 | None | SRR1196716 | MDR-TB | lineage4.4.1.1 | None | ERR11773735 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11488439 | MDR-TB | lineage4.4.1.1 | None | SRR29050657 | MDR-TB | lineage4.3.3 | None | SRR1169310 | MDR-TB | lineage4.4.1.1 | None | SRR9971105 | XDR-TB | lineage4.4.1.1 | None | SRR3142013 | MDR-TB | lineage4.2.2.2 | None | SRR5341407 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR9224932 | MDR-TB | lineage4.3.3 | None | ERR9806649 | MDR-TB | lineage4.4.1.1 | None | SRR29051558 | MDR-TB | lineage4.3.3 | None | SRR29289114 | MDR-TB | lineage3 | None | ERR11774892 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR5866004 | MDR-TB | lineage2.2.1 | None | SRR1173187 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9224946 | MDR-TB | lineage4.3.3 | None | SRR29051311 | MDR-TB | lineage4.3.3 | None | ERR9993107 | XDR-TB | lineage4.4.1.1 | None | SRR29051340 | MDR-TB | lineage4.3.3 | None | ERR13276331 | MDR-TB | lineage2.2.1 | None | ERR11488438 | HR-TB | lineage4.4.1.1 | None | DRR474002 | RR-TB | lineage4.9 | None | SAMN02403580 | MDR-TB | lineage4.4.1.1 | za | SAMN02586002 | MDR-TB | lineage4.4.1.1 | za | ERR7737843 | MDR-TB | lineage4.4.1.1 | None | ERR4809173 | MDR-TB | lineage4.4.1.1 | za | SRR28393553 | MDR-TB | lineage4.3.3 | None | ERR3287855 | Pre-XDR-TB | lineage4.3.3 | pe | ERR10748274 | MDR-TB | lineage4.4.1.1 | None | SRR6398042 | HR-TB | lineage1.2.1.2.1 | ca | SRR1173317 | MDR-TB | lineage4.4.1.1 | None | SRR10315616 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4831642 | MDR-TB | lineage2.2.1 | vn | ERR4830490 | MDR-TB | lineage4.4.1.1 | za | ERR7911203 | MDR-TB | lineage4.4.1.1 | za | ERR7911438 | MDR-TB | lineage4.4.1.1 | za | SRR10315510 | MDR-TB | lineage4.4.1.1 | None | SRR13449600 | HR-TB | lineage4.3.3 | None | SRR13449607 | MDR-TB | lineage4.3.3 | None | ERR8975810 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR832977 | MDR-TB | lineage4.4.1.1 | None | SRR9224972 | HR-TB | lineage4.3.3 | None | SRR5709781 | MDR-TB | lineage4.2.2 | th | ERR2041688 | MDR-TB | lineage4.2.2.1 | rs | ERR2041709 | MDR-TB | lineage4.2.2.1 | rs | ERR2041777 | MDR-TB | lineage4.2.2.1 | rs | ERR2041795 | MDR-TB | lineage4.2.2.1 | rs | ERR2041798 | MDR-TB | lineage4.2.2.1 | rs | ERR11773748 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR7737759 | MDR-TB | lineage2.2.1 | None | SRR1167376 | MDR-TB | lineage4.4.1.1 | None | SAMN02053755 | MDR-TB | lineage4.4.1.1 | za | SAMN02350492 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR1167324 | MDR-TB | lineage4.4.1.1 | None | SRR1184309 | MDR-TB | lineage4.4.1.1 | None | SAMN02403494 | MDR-TB | lineage4.4.1.1 | za | SAMN02403495 | MDR-TB | lineage4.4.1.1 | za | SRR5067292 | MDR-TB | lineage2.2.1 | vn | SRR25515401 | MDR-TB | lineage2.2.2 | None | SRR9971052 | MDR-TB | lineage4.4.1.1 | None | SRR1169148 | MDR-TB | lineage4.4.1.1 | None | SRR13449598 | MDR-TB | lineage4.3.3 | None | SRR9971251 | MDR-TB | lineage4.4.1.1 | None | SRR9224987 | MDR-TB | lineage4.3.3 | None | SRR833018 | MDR-TB | lineage4.4.1.1 | None | ERR9992983 | XDR-TB | lineage4.4.1.1 | None | ERR10748259 | MDR-TB | lineage4.4.1.1 | None | ERR7737738 | MDR-TB | lineage4.4.1.1 | None | ERR9992643 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992837 | XDR-TB | lineage4.4.1.1 | None | ERR9992632 | XDR-TB | lineage4.4.1.1 | None | ERR11488919 | MDR-TB | lineage4.4.1.1 | None | SRR1165668 | MDR-TB | lineage4.4.1.1 | None | SRR21675940 | MDR-TB | lineage4.1.3 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR9225003 | MDR-TB | lineage4.3.3 | None | SRR9971366 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR7732708 | MDR-TB | lineage4.2.2.2 | None | ERR7737802 | MDR-TB | lineage4.4.1.1 | None | ERR9029377 | MDR-TB | lineage4.4.1.1 | None | SRR1167342 | MDR-TB | lineage4.4.1.1 | None | ERR2041797 | MDR-TB | lineage4.2.2.1 | None | SRR1196494 | MDR-TB | None | SRR29051305 | MDR-TB | lineage4.3.3 | None | SRR1173095 | MDR-TB | lineage4.4.1.1 | None | SRR29050666 | MDR-TB | lineage4.3.3 | None | SRR29051589 | MDR-TB | lineage4.3.3 | None | SRR29093281 | MDR-TB | lineage4.2.2.2 | None | SRR29093641 | MDR-TB | lineage4.2.2.2 | None | SRR29050658 | HR-TB | lineage4.3.3 | None | SRR29051363 | MDR-TB | lineage4.3.3 | None | SRR1165620 | MDR-TB | lineage4.4.1.1 | None | SRR1173786 | MDR-TB | lineage4.4.1.1 | None | ERR1013702 | MDR-TB | lineage4.3.3 | None | ERR9992640 | XDR-TB | lineage4.4.1.1 | None | ERR5866003 | MDR-TB | lineage2.2.1 | None | ERR7737855 | MDR-TB | lineage4.2.2.2 | None | SRR13583442 | MDR-TB | lineage4.3.3 | None | ERR11082092 | MDR-TB | lineage2.2.1 | None | SRR1196553 | MDR-TB | lineage4.4.1.1 | None | ERR9993151 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9224989 | HR-TB | lineage4.3.3 | None | SRR1173339 | MDR-TB | lineage4.4.1.1 | None | SRR29051032 | MDR-TB | lineage4.3.3 | None | SRR29050699 | MDR-TB | lineage4.3.3 | None | ERR10610092 | MDR-TB | lineage4.4.1.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR11082169 | MDR-TB | lineage2.2.1 | None | ERR7737904 | MDR-TB | lineage4.4.1.1 | None | SRR29051342 | HR-TB | lineage4.3.3 | None | SRR29050662 | HR-TB | lineage4.3.3 | None | SRR1175355 | MDR-TB | lineage4.4.1.1 | None | SRR13583449 | HR-TB | lineage4.3.3 | None | SRR29096761 | MDR-TB | lineage4.3.4.2.1 | None | ERR7737669 | MDR-TB | lineage2.2.1 | None | SRR29051317 | MDR-TB | lineage4.3.3 | None | SRR10315463 | MDR-TB | lineage4.4.1.1 | None | ERR10610045 | MDR-TB | lineage4.4.1.1 | None | SRR6856035 | MDR-TB | lineage4.4.1.1 | None | SRR1165254 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1169217 | MDR-TB | lineage4.4.1.1 | None | SRR29051594 | HR-TB | lineage4.3.3 | None | SRR29050670 | MDR-TB | lineage4.3.3 | None | SRR9971164 | MDR-TB | lineage4.4.1.1 | None | SRR29051242 | MDR-TB | lineage4.3.3 | None | SRR1172777 | MDR-TB | lineage4.4.1.1 | None | SRR1167345 | MDR-TB | lineage4.4.1.1 | None | SRR9224917 | MDR-TB | lineage4.3.3 | None | SRR9224923 | HR-TB | lineage4.3.3 | None | SRR1173150 | MDR-TB | lineage4.4.1.1 | None | SRR13449602 | HR-TB | lineage4.3.3 | None | SRR1167344 | MDR-TB | lineage4.4.1.1 | None | ERR11774887 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4831241 | MDR-TB | lineage4.2.2.2 | de | ERR4831752 | MDR-TB | lineage2.2.1 | vn | ERR4809298 | MDR-TB | lineage4.4.1.1 | za | ERR4831816 | MDR-TB | lineage2.2.1 | None | ERR7911177 | MDR-TB | lineage2.2.1 | vn | ERR7911437 | MDR-TB | lineage4.4.1.1 | za | ERR7911446 | MDR-TB | lineage4.4.1.1 | za | ERR4830791 | Pre-XDR-TB | lineage1.1.2 | et | ERR4830785 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR8975512 | XDR-TB | lineage4.4.1.1 | None | SRR833017 | MDR-TB | lineage4.4.1.1 | None | SRR29051012 | HR-TB | lineage4.3.3 | None | SAMN02053771 | MDR-TB | lineage4.4.1.1 | za | SAMN02053774 | MDR-TB | lineage4.4.1.1 | za | SRR26400072 | MDR-TB | lineage2.2.1 | None | SRR29050731 | MDR-TB | lineage4.3.3 | None | SRR1172353 | MDR-TB | lineage4.4.1.1 | None | SRR26399795 | MDR-TB | lineage2.2.1 | None | SRR5073555 | MDR-TB | lineage2.2.1 | vn | SRR9971177 | MDR-TB | lineage4.4.1.1 | None | SRR1167316 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN01925652 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971191 | MDR-TB | lineage4.4.1.1 | None | ERR7737645 | MDR-TB | lineage4.2.2.2 | None | ERR13289310 | MDR-TB | lineage4.4.1.1 | None | SRR786670 | Pre-XDR-TB | lineage3 | None | SRR13449604 | HR-TB | lineage4.3.3 | None | ERR13289309 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9992789 | XDR-TB | lineage4.4.1.1 | None | SRR9971199 | MDR-TB | lineage4.4.1.1 | None | ERR11488976 | MDR-TB | lineage4.4.1.1 | None | SRR1019153 | MDR-TB | lineage4.4.1.1 | None | ERR4831769 | MDR-TB | lineage2.2.1 | vn | ERR4831746 | MDR-TB | lineage2.2.1 | None | SRR1165653 | MDR-TB | lineage4.4.1.1 | None | ERR7737920 | MDR-TB | lineage4.4.1.1 | None | SRR9224970 | MDR-TB | lineage4.3.3 | None | ERR11488717 | MDR-TB | lineage4.4.1.1 | None | ERR7737666 | MDR-TB | lineage4.4.1.1 | None | SRR13449608 | MDR-TB | lineage4.3.3 | None | SRR832997 | MDR-TB | lineage4.4.1.1 | None | SRR9971365 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR9971316 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR9806836 | MDR-TB | lineage4.4.1.1 | None | ERR1034649 | MDR-TB | lineage4.3.3 | br | ERR7737788 | MDR-TB | lineage4.4.1.1 | None | SRR1167304 | MDR-TB | lineage4.4.1.1 | None | SRR29056148 | MDR-TB | lineage4.4.1.1 | None | ERR7737688 | MDR-TB | lineage4.4.1.1 | None | SRR11662458 | MDR-TB | lineage4.2.2 | None | SRR13583388 | MDR-TB | lineage4.3.3 | None | ERR10748251 | MDR-TB | lineage4.4.1.1 | None | SRR29050637 | MDR-TB | lineage4.3.3 | None | ERR4011966 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1184384 | MDR-TB | lineage4.4.1.1 | None | SRR9224959 | MDR-TB | lineage4.3.3 | None | SRR29051553 | MDR-TB | lineage4.3.3 | None | SRR16370603 | MDR-TB | lineage2.2.1 | None | SRR29053196 | MDR-TB | lineage4.1.3 | None | ERR13260892 | MDR-TB | lineage4.4.1.1 | None | ERR1013703 | MDR-TB | lineage4.3.3 | None | SRR29051030 | MDR-TB | lineage4.3.3 | None | SRR29093645 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR7737649 | MDR-TB | lineage4.4.1.1 | None | ERR9993071 | XDR-TB | lineage4.4.1.1 | None | ERR10748445 | MDR-TB | lineage4.4.1.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | ERR7737840 | MDR-TB | lineage4.2.2.2 | None | SRR29050740 | MDR-TB | lineage4.3.3 | None | SRR29051299 | HR-TB | lineage4.3.3 | None | SRR1165244 | MDR-TB | lineage4.4.1.1 | None | ERR13276337 | MDR-TB | lineage2.2.1 | None | SRR29051249 | HR-TB | lineage4.3.3 | None | ERR10748268 | MDR-TB | lineage4.4.1.1 | None | SRR1169220 | MDR-TB | lineage4.4.1.1 | None | SRR29051569 | MDR-TB | lineage4.3.3 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR13583387 | MDR-TB | lineage4.3.3 | None | SRR29016966 | MDR-TB | lineage4.3.4.1 | None | SRR29051215 | HR-TB | lineage4.3.3 | None | SRR29273965 | MDR-TB | lineage4.7 | None | SRR9224945 | MDR-TB | lineage4.3.3 | None | ERR10748180 | MDR-TB | lineage4.4.1.1 | None | SRR9224993 | HR-TB | lineage4.3.3 | None | SRR29051322 | MDR-TB | lineage4.3.3 | None | SRR1019160 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4798938 | Pre-XDR-TB | lineage3 | in | SRR1173595 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR833117 | MDR-TB | lineage4.4.1.1 | None | SRR9971027 | MDR-TB | lineage4.4.1.1 | None | ERR4011962 | MDR-TB | lineage4.2.2.2 | None | SAMN02403535 | MDR-TB | lineage4.4.1.1 | za | SAMN02586037 | MDR-TB | lineage4.4.1.1 | za | SAMN02403581 | MDR-TB | lineage4.4.1.1 | za | SRR1172090 | MDR-TB | lineage4.4.1.1 | None | ERR1013704 | HR-TB | lineage4.3.3 | None | SRR9224977 | MDR-TB | lineage4.3.3 | None | ERR9992627 | XDR-TB | lineage4.4.1.1 | None | ERR4832017 | MDR-TB | lineage2.2.1 | vn | ERR7911290 | MDR-TB | lineage2.1 | vn | SRR11662362 | Pre-XDR-TB | lineage4.2.2 | None | SRR9971286 | MDR-TB | lineage4.4.1.1 | None | ERR751361 | MDR-TB | lineage2.2.1 | pe |
|---|
