Rv2428 - c.-51G>A

Drug resistance types
18 Sensitive 35 RR-TB 38 HR-TB 54 MDR-TB 71 Pre-XDR-TB 0 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.9 4
lineage4.4.1.1 2
lineage4.5 11
lineage4.2.1 9
lineage4.8 10
lineage2.2.1 88
lineage2.2.1.2 3
lineage4.1.2 1
lineage4.2.1.1 7
lineage4.1.2.1 14
lineage6.2.2 1
lineage4.8;lineage4.7 1
lineage4.4.2 2
lineage4.6.2.2 1
lineage4.2.2.2 1
lineage4.1.1 5
lineage4.8;lineage4.1.2.1 1
lineage4.3.3 20
lineage4. 3
lineage4.6 1
lineage4.6.1.2 3
lineage4.8.1 1
lineage2.2.2 3
lineage4. 1
lineage4.3.3;lineage4.2.1 2
lineage1.1.2 5
La1.7.1 1
lineage4.3.4.1 1
lineage4.2.2.2;lineage2.2 1
lineage1.1.1 1
lineage1.1.3.2 1
lineage4.9.1 1
lineage2.2.1.1 2
lineage4;lineage2.2.1 1
lineage4.3.1 1
lineage4.1.1.3 12
lineage4.3.4.2 1
lineage1. 3
lineage4.1 1
lineage3 1
spoligotype Counts
spoligotype Count
None 228
Geographic prevalence
Country level data for this variant is available for 83 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
ERR4815472 Other lineage4.9 gb
ERR3287762 MDR-TB lineage4.4.1.1 pe
ERR4830762 Pre-XDR-TB lineage4.5 ir
ERR4816118 Other lineage4.9 gb
ERR2510538 Pre-XDR-TB lineage4.2.1 pk
ERR3287876 RR-TB lineage4.8 pe
SRR9971358 MDR-TB lineage2.2.1 None
ERR11067507 HR-TB lineage4.8 None
SRR8217880 Sensitive lineage2.2.1 None
DRR130103 Pre-XDR-TB lineage2.2.1.2 None
SRR8923700 MDR-TB lineage4.1.2 None
SRR7516424 Pre-XDR-TB lineage2.2.1 None
ERR4818221 HR-TB lineage4.2.1.1 gb
DRR130138 Pre-XDR-TB lineage4.5 None
DRR130196 Pre-XDR-TB lineage2.2.1 None
DRR130156 MDR-TB lineage2.2.1 None
ERR11049122 Sensitive lineage4.1.2.1 None
ERR10680134 MDR-TB lineage6.2.2 None
ERR11043447 MDR-TB lineage2.2.1 None
ERR11044261 MDR-TB lineage4.8;lineage4.7 None
ERR11044040 HR-TB lineage4.8 None
ERR11044755 HR-TB lineage4.1.2.1 None
ERR11044862 HR-TB lineage4.2.1 None
ERR4820750 Sensitive lineage4.1.2.1 gb
ERR11488332 RR-TB lineage2.2.1 None
ERR11488404 RR-TB lineage2.2.1 None
ERR4820905 Sensitive lineage4.8 gb
ERR3273130 Pre-XDR-TB lineage4.4.2 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR4822153 HR-TB lineage4.2.2.2 gb
ERR4024879 HR-TB lineage4.1.1 None
ERR4553588 HR-TB lineage2.2.1 None
ERR11049468 Sensitive lineage4.8;lineage4.1.2.1 None
ERR4195550 HR-TB lineage4.3.3 None
ERR4276853 MDR-TB lineage4.2.1 None
ERR4276854 MDR-TB lineage4.2.1 None
ERR2515426 Other lineage4. za
ERR11798649 Pre-XDR-TB lineage4.2.1.1 None
ERR8976079 MDR-TB lineage4.1.2.1 None
ERR4800140 Other lineage4.9 None
ERR4829994 RR-TB lineage4.6 None
ERR5864811 Pre-XDR-TB lineage4.3.3 None
ERR4830503 MDR-TB lineage2.2.1 None
ERR5864803 Pre-XDR-TB lineage4.3.3 None
ERR5866329 Pre-XDR-TB lineage2.2.1 None
ERR5864814 MDR-TB lineage4.3.3 None
ERR5864807 Pre-XDR-TB lineage4.3.3 None
ERR5897107 Pre-XDR-TB lineage2.2.1 None
ERR5866330 Pre-XDR-TB lineage2.2.1 None
ERR5866331 Pre-XDR-TB lineage2.2.1 None
SRR16088146 Pre-XDR-TB lineage4.3.3 None
ERR6358845 RR-TB lineage4.6.1.2 None
ERR6865659 HR-TB lineage4.1.1 None
ERR8975167 HR-TB lineage4.8.1 None
ERR11466368 Sensitive lineage4.4.1.1 None
SRR21859819 Sensitive lineage4.1.2.1 None
ERR9121598 HR-TB lineage4.3.3 None
ERR9119509 Pre-XDR-TB lineage4.3.3 None
ERR9119593 RR-TB lineage4.1.2.1 None
ERR970451 RR-TB lineage4.1.2.1 None
ERR972799 RR-TB lineage4.1.2.1 None
ERR970452 RR-TB lineage4.1.2.1 None
ERR9992794 Pre-XDR-TB lineage2.2.2 None
SRR10305971 Pre-XDR-TB lineage2.2.1 None
ERR9992798 HR-TB lineage2.2.2 None
ERR9993041 Pre-XDR-TB lineage4. None
SRR10305972 Pre-XDR-TB lineage4.5 None
SRR10306000 Pre-XDR-TB lineage2.2.1 None
SRR1166934 MDR-TB lineage4.3.3 None
SRR10315692 MDR-TB lineage2.2.1 None
SRR11349137 RR-TB lineage4. None
SRR10306011 Pre-XDR-TB lineage2.2.1 None
SRR10306032 MDR-TB lineage2.2.1 None
SRR10397238 Pre-XDR-TB lineage4.3.3;lineage4.2.1 None
SRR1162823 MDR-TB lineage4.3.3 None
SRR11845663 HR-TB lineage4.9 None
SRR1169496 HR-TB lineage1.1.2 None
SRR1172329 HR-TB lineage1.1.2 None
SRR1180135 HR-TB lineage1.1.2 None
SRR1183011 HR-TB lineage1.1.2 None
SRR13312530 Pre-XDR-TB lineage4.3.3;lineage4.2.1 None
SRR12142356 Pre-XDR-TB lineage2.2.1 None
SRR12416827 MDR-TB lineage2.2.1 None
SRR13583436 Sensitive lineage4.1.1 None
SRR13423654 HR-TB lineage4.4.2 None
SRR15316290 RR-TB lineage2.2.1 None
SRR13583439 Other La1.7.1 None
SRR18054799 RR-TB lineage2.2.1 None
SRR15364430 Pre-XDR-TB lineage2.2.1 None
SRR15368767 RR-TB lineage2.2.1 None
SRR15368895 Sensitive lineage2.2.1 None
SRR15316284 RR-TB lineage2.2.1 None
SRR15316365 MDR-TB lineage2.2.1 None
SRR15399227 Other lineage4.3.4.1 None
SRR16115033 HR-TB lineage2.2.1 None
SRR18002924 Other lineage2.2.1 None
SRR18912071 HR-TB lineage2.2.1 None
SRR18593214 MDR-TB lineage4.2.2.2;lineage2.2 None
SRR18593215 Pre-XDR-TB lineage4.8 None
SRR11662388 Pre-XDR-TB lineage1.1.1 None
SRR18500585 Sensitive lineage4.5 None
SRR20632776 Pre-XDR-TB lineage2.2.1 None
ERR11082236 MDR-TB lineage4.8 None
SRR25206974 Pre-XDR-TB lineage2.2.1 None
SRR25207278 MDR-TB lineage2.2.1 None
SRR21277349 Sensitive lineage2.2.1 None
SRR22424939 Pre-XDR-TB lineage1.1.3.2 None
DRR261146 Other lineage2.2.2 None
SRR25207227 Pre-XDR-TB lineage2.2.1 None
SRR22528526 Pre-XDR-TB lineage4.1.1 None
ERR11069059 Pre-XDR-TB lineage2.2.1.2 None
ERR11083084 MDR-TB lineage4.3.3 None
ERR11082881 MDR-TB lineage4.5 None
ERR10112871 RR-TB lineage4.9.1 None
ERR9806839 MDR-TB lineage2.2.1 None
SRR25206858 MDR-TB lineage2.2.1 None
ERR10610104 MDR-TB lineage2.2.1 None
SRR25207201 RR-TB lineage2.2.1 None
SRR25207072 MDR-TB lineage2.2.1 None
SRR25207103 Pre-XDR-TB lineage4.5 None
SRR25207257 Pre-XDR-TB lineage2.2.1 None
SRR25206915 Pre-XDR-TB lineage2.2.1 None
SRR25515104 Sensitive lineage2.2.1 None
SRR25827640 Pre-XDR-TB lineage2.2.1 None
SAMN03246586 Pre-XDR-TB lineage2.2.1 cn
SRR25827732 Pre-XDR-TB lineage2.2.1 None
SRR1723932 Pre-XDR-TB lineage4.5 cn
SRR1723828 RR-TB lineage2.2.1 cn
SRR1723493 RR-TB lineage2.2.1 cn
ERR4815278 Other lineage4.8 None
ERR4814296 Other lineage4.8 None
SRR6824654 MDR-TB lineage2.2.1 cn
SRR3105738 HR-TB lineage2.2.1 None
SRR3544717 Pre-XDR-TB lineage4.3.3 None
SRR6824350 MDR-TB lineage2.2.1 cn
SRR6824371 Pre-XDR-TB lineage2.2.1 cn
SRR6824352 MDR-TB lineage2.2.1 cn
SRR6824444 Pre-XDR-TB lineage2.2.1 cn
SRR6824644 MDR-TB lineage2.2.1 cn
SRR6824430 RR-TB lineage2.2.1.1 cn
SRR5709799 Pre-XDR-TB lineage2.2.1 th
SRR5709871 MDR-TB lineage2.2.1 th
ERR2041767 RR-TB lineage4.1.2.1 rs
SRR1723595_SRR1723596 Pre-XDR-TB lineage2.2.1 None
ERR4813576 RR-TB lineage4.3.3 None
SRR6824364 Pre-XDR-TB lineage4;lineage2.2.1 cn
SRR6824307 RR-TB lineage2.2.1 cn
ERR3014597 MDR-TB lineage4.3.1 tn
ERR4813561 HR-TB lineage4.1.1.3 None
SRR1723840 MDR-TB lineage2.2.1 cn
SAMN03246453 Pre-XDR-TB lineage2.2.1 cn
SRR1723611 MDR-TB lineage2.2.1 cn
SRR1723627 MDR-TB lineage2.2.1 cn
SRR1723789 Pre-XDR-TB lineage2.2.1 None
SRR1723693_SRR1723694 RR-TB lineage2.2.1.1 None
SRR6257086 MDR-TB lineage4.2.1.1 ru
ERR751505 HR-TB lineage4.1.1.3 pe
ERR4818954 HR-TB lineage4.2.1.1 None
ERR502936 RR-TB lineage2.2.1 None
SAMEA2534631 RR-TB lineage2.2.1 uz
ERR775343 HR-TB lineage4.1.1.3 pe
ERR775312 HR-TB lineage4.1.1.3 pe
ERR751388 HR-TB lineage4.1.1 pe
ERR7911742 MDR-TB lineage4.3.3 us
ERR779859 HR-TB lineage4.1.1.3 pe
SRR1166134 MDR-TB lineage4.2.1 ro
SAMN02414952 MDR-TB lineage4.3.3 se
ERR2707193 RR-TB lineage4.6.1.2 cd
SRR1166319 MDR-TB lineage4.2.1 ro
ERR2653069 MDR-TB lineage4.1.1.3 None
ERR1199124 RR-TB lineage4.6.1.2 cd
SRR5486880 RR-TB lineage4.3.3 None
SRR8651663 Pre-XDR-TB lineage2.2.1 cn
ERR2653202 RR-TB lineage4.3.4.2 None
SAMN02599019 HR-TB lineage1.1.2 in
ERR4822290 MDR-TB lineage4.2.1 None
ERR4797662 Pre-XDR-TB lineage2.2.1 in
ERR4797688 Pre-XDR-TB lineage2.2.1 in
ERR3148169 Pre-XDR-TB lineage4.1.2.1 mx
ERR2516440 RR-TB lineage4.1.2.1 pe
ERR2179675 Pre-XDR-TB lineage4.5 cn
ERR2516243 MDR-TB lineage2.2.1 be
ERR4798022 Pre-XDR-TB lineage4.1.1.3 in
ERR3256144 MDR-TB lineage1. ph
ERR3256143 MDR-TB lineage1. ph
ERR4796257 Pre-XDR-TB lineage2.2.1 in
ERR4798226 Pre-XDR-TB lineage2.2.1 in
ERR4796576 Pre-XDR-TB lineage2.2.1 in
SRR6484981 HR-TB lineage4.2.1.1 None
ERR4796916 Pre-XDR-TB lineage2.2.1 in
ERR4810950 Pre-XDR-TB lineage2.2.1 cn
ERR4810990 Pre-XDR-TB lineage2.2.1 cn
ERR4830778 Pre-XDR-TB lineage4.5 None
ERR4796964 Pre-XDR-TB lineage2.2.1 in
ERR4810843 RR-TB lineage2.2.1 cn
SRR6356948 RR-TB lineage4.2.1 None
ERR4798527 Pre-XDR-TB lineage2.2.1 in
ERR4811155 Pre-XDR-TB lineage4.5 cn
SRR6485122 MDR-TB lineage2.2.1 None
ERR4811343 MDR-TB lineage2.2.1 cn
ERR4799761 Pre-XDR-TB lineage2.2.1 in
ERR4797338 Pre-XDR-TB lineage4.1.1.3 in
ERR4811286 MDR-TB lineage2.2.1 cn
SRR6484859 HR-TB lineage4.2.1 None
SRR6484931 MDR-TB lineage4.8 None
ERR4811641 Sensitive lineage2.2.1 cn
ERR4830620 RR-TB lineage2.2.1 tm
ERR4799760 Pre-XDR-TB lineage2.2.1 in
ERR4800317 Pre-XDR-TB lineage2.2.1 in
ERR4814432 Sensitive lineage4.8 gb
ERR4829632 Sensitive lineage4.3.3 it
ERR4816455 Sensitive lineage4.1.2.1 gb
ERR4829417 Sensitive lineage4.3.3 it
ERR4872195 RR-TB lineage4.1.2.1 None
ERR2510147 HR-TB lineage4.1.1.3 pe
ERR2510144 HR-TB lineage4.1.1.3 pe
ERR2510222 HR-TB lineage4.1.1.3 pe
ERR2510213 HR-TB lineage4.1.1.3 pe
ERR4872103 Pre-XDR-TB lineage4.3.3 None
SRR6785279 MDR-TB lineage4.3.3 None
SRR6896271 Other lineage4. None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6930915 RR-TB lineage2.2.1.2 None
SRR6785396 Sensitive lineage4.1 None
SRR6832510 HR-TB lineage4.2.1.1 None
SRR6964539 Other lineage3 None
SRR6930926 MDR-TB lineage1. None
ERR2510698 MDR-TB lineage4.5 pk