Rv2428 - c.-81C>T


Drug resistance types
0 Sensitive 0 RR-TB 37 HR-TB 112 MDR-TB 43 Pre-XDR-TB 0 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.1.2.1 26
lineage4.6.2.2 4
lineage1.1.1.1 3
lineage3.1.1 1
lineage2.2.1 47
lineage2.2 2
lineage4.8 8
lineage4.1.1 7
lineage4.1.4 3
lineage4.7 1
lineage4.2.2.2 6
lineage4.4 1
lineage4.5 16
lineage4 2
lineage2.2.1.1 3
lineage4.4.2 7
lineage3 4
lineage4.3.4.2.1 8
lineage4.3.3 4
lineage4.4.1.1;lineage4.3.3;lineage2.2.1 1
lineage4.1.2 3
lineage4.1 1
lineage4.3.2.1 2
lineage2.2.2 1
lineage4.6.1.2 9
lineage4.4.1.1 1
lineage4.8;lineage2.2.1 1
lineage4.3.4.1 4
lineage4.4.1.2 1
lineage4.1.1.3 1
lineage6.2.2 1
lineage4.9 1
lineage4.9;lineage4.1 1
lineage4.2.1 1
lineage4.2.1.1 1
lineage1.2.1.2.1 1
1
lineage1.1.2 1
lineage4.2.2 1
lineage4.6.1.1 3
lineage1.1.1 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 192
Geographic prevalence
Country level data for this variant is available for 81 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9119511 MDR-TB lineage4.1.2.1 None
ERR8774232 Pre-XDR-TB lineage4.6.2.2 None
SRR069993 HR-TB lineage1.1.1.1 None
ERR9119622 MDR-TB lineage4.6.2.2 None
ERR9121553 MDR-TB lineage4.1.2.1 None
ERR9992669 Pre-XDR-TB lineage3.1.1 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR070023 HR-TB lineage1.1.1.1 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR10525355 Pre-XDR-TB lineage4.1.2.1 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR10525324 MDR-TB lineage4.8 None
SRR13423594 Pre-XDR-TB lineage2.2.1 None
SRR11972441 MDR-TB lineage2.2.1 None
SRR13423565 Pre-XDR-TB lineage2.2.1 None
SRR10808440 HR-TB lineage4.1.1 None
SRR1368335 Pre-XDR-TB lineage2.2.1 None
SRR13583386 HR-TB lineage4.1.4 None
SRR13583390 HR-TB lineage4.1.2.1 None
SRR13583473 HR-TB lineage4.1.2.1 None
SRR13583419 MDR-TB lineage4.7 None
SRR15316543 HR-TB lineage2.2.1 None
SRR15014747 MDR-TB lineage4.2.2.2 None
SRR15315964 Pre-XDR-TB lineage4.4 None
SRR15316314 MDR-TB lineage2.2.1 None
SRR15316305 MDR-TB lineage2.2.1 None
SRR16370294 HR-TB lineage4.1.1 None
SRR15316582 MDR-TB lineage4.5 None
SRR15316583 MDR-TB lineage4.5 None
SRR15506912 Pre-XDR-TB lineage2.2.1 None
SRR16149167 MDR-TB lineage4 None
SRR20969519 HR-TB lineage2.2.1.1 None
SRR17856658 Pre-XDR-TB lineage2.2.1 None
SRR19128044 HR-TB lineage4.1.1 None
SRR20632773 Pre-XDR-TB lineage2.2.1 None
SRR20969472 Pre-XDR-TB lineage2.2.1 None
SRR21277183 HR-TB lineage2.2.1 None
SRR20969817 MDR-TB lineage2.2.1 None
SRR21277359 HR-TB lineage4.4.2 None
SRR21277271 MDR-TB lineage4.4.2 None
SRR21277270 MDR-TB lineage4.4.2 None
SRR22179513 HR-TB lineage3 None
ERR11050915 HR-TB lineage4.2.2.2 None
ERR11081605 MDR-TB lineage4.1.2.1 None
SRR22179517 HR-TB lineage3 None
ERR4813831 Pre-XDR-TB lineage4.1.2.1 None
ERR11081608 MDR-TB lineage4.1.2.1 None
SRR21887785 Pre-XDR-TB lineage2.2.1 None
ERR2199989 HR-TB lineage4.3.4.2.1 sz
ERR4813838 Pre-XDR-TB lineage4.1.2.1 None
ERR2041730 Pre-XDR-TB lineage4.8 rs
ERR4813903 Pre-XDR-TB lineage4.1.2.1 None
ERR176554 HR-TB lineage4.3.4.2.1 mw
SRR1723935 MDR-TB lineage4.5 cn
ERR2099781 Pre-XDR-TB lineage4.1.2.1 es
ERR2099789 MDR-TB lineage4.1.2.1 es
ERR4813647 Pre-XDR-TB lineage4.3.3 None
SRR1723993 MDR-TB lineage4.4.2 cn
ERR2179733 MDR-TB lineage4.5 cn
ERR4813672 MDR-TB lineage4.4.1.1;lineage4.3.3;lineage2.2.1 None
ERR2179641 MDR-TB lineage4.5 cn
ERR212122 HR-TB lineage4.3.4.2.1 mw
ERR2184208 HR-TB lineage4.1.1 pe
SRR5073939 HR-TB lineage1.1.1.1 vn
SRR1723906 MDR-TB lineage4.5 cn
SRR1723806 MDR-TB lineage2.2.1 cn
ERR2041771 MDR-TB lineage4.1.2 rs
ERR2099791 MDR-TB lineage4.1.2.1 es
ERR2197000 HR-TB lineage4.2.2.2 None
ERR2179658 MDR-TB lineage4.5 cn
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
ERR2510578 Pre-XDR-TB lineage3 pk
SRR1723672 MDR-TB lineage2.2.1 cn
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR553226 MDR-TB lineage4.1 None
ERR2510401 MDR-TB lineage3 pk
ERR2179653 MDR-TB lineage4.4.2 cn
ERR553208 MDR-TB lineage2.2.1 uz
SRR1723883 HR-TB lineage2.2.1 cn
SRR6824287 MDR-TB lineage2.2.1 cn
ERR2179677 MDR-TB lineage4.5 cn
ERR2515445 MDR-TB lineage4.3.2.1 za
SRR1723747 MDR-TB lineage2.2.1 None
ERR2516725 MDR-TB lineage4.1.2.1 nl
ERR2516703 MDR-TB lineage4.1.1 nl
SRR1723900 MDR-TB lineage4.5 cn
SAMEA2534464 HR-TB lineage2.2.2 kr
ERR2179654 MDR-TB lineage4.5 cn
ERR551253 MDR-TB lineage4.6.1.2 cg
SRR1723651 MDR-TB lineage2.2.1 cn
ERR2652982 HR-TB lineage4.4.1.1 None
SRR5486869 MDR-TB lineage4.1.2.1 None
SRR5486894 Pre-XDR-TB lineage4.1.2.1 None
ERR2653208 MDR-TB lineage4.1.1 None
ERR2653200 HR-TB lineage4.8 None
ERR2706993 MDR-TB lineage4.6.1.2 cd
SRR20969758 MDR-TB lineage2.2 None
ERR2706920 MDR-TB lineage4.6.1.2 cd
ERR2707099 MDR-TB lineage4.6.1.2 cd
ERR2707000 MDR-TB lineage4.1.2 cd
ERR4827577 MDR-TB lineage2.2.1 None
ERR2707142 MDR-TB lineage4.6.1.2 cd
ERR4827606 MDR-TB lineage4.8;lineage2.2.1 None
ERR4827605 HR-TB lineage4.8 None
ERR4827859 HR-TB lineage4.8 None
ERR4827896 HR-TB lineage2.2.1 None
SAMN03246659 MDR-TB lineage4.5 cn
SRR5709881 MDR-TB lineage2.2.1 th
SAMEA104221066 MDR-TB lineage4.1.2.1 es
ERR2864254 MDR-TB lineage4.3.4.1 pt
SRR6044999 MDR-TB lineage4.1.2.1 gb
ERR3132088 MDR-TB lineage2.2.1 None
SRR6511616 MDR-TB lineage4.3.4.1 None
ERR2935859 HR-TB lineage4.3.4.1 None
ERR2864237 Pre-XDR-TB lineage4.3.3 pt
ERR2099785 MDR-TB lineage4.1.2.1 es
ERR4829863 MDR-TB lineage4.4.1.2 it
ERR2884681 MDR-TB lineage4.1.2.1 None
SRR6930907 MDR-TB lineage2.2.1 None
ERR4872105 MDR-TB lineage4.1.2.1 None
ERR4872228 MDR-TB lineage4.6.2.2 None
SRR671727 MDR-TB lineage2.2.1 cn
SRR671784 Pre-XDR-TB lineage2.2.1 cn
SAMEA2534973 MDR-TB lineage2.2.1 uz
SRR6824331 MDR-TB lineage4.4.2 cn
SRR6930922 Pre-XDR-TB lineage4.3.4.1 None
SRR6824330 MDR-TB lineage4.5 cn
SRR6824485 MDR-TB lineage4.5 cn
SRR6824380 MDR-TB lineage2.2.1 cn
ERR2984782 Pre-XDR-TB lineage4.3.3 None
SRR6824531 MDR-TB lineage4.5 cn
SRR6824642 MDR-TB lineage4.4.2 cn
SRR6824600 MDR-TB lineage2.2.1 cn
SRR6824644 MDR-TB lineage2.2.1 cn
SRR8237323 MDR-TB lineage2.2.1 np
ERR502932 MDR-TB lineage2.2.1 None
SRR9613542 MDR-TB lineage4.1.2 None
SRR9738535 MDR-TB lineage4.1.2.1 None
SRR7592355 Pre-XDR-TB lineage4.1.4 None
SRR7592346 MDR-TB lineage4.1.2.1 None
SRR7592363 MDR-TB lineage4.1.2.1 None
SRR2024993 MDR-TB lineage2.2.1 cn
SRR8651589 Pre-XDR-TB lineage2.2.1 cn
SRR8651642 Pre-XDR-TB lineage4.5 cn
DRR130164 Pre-XDR-TB lineage2.2.1 None
DRR130189 Pre-XDR-TB lineage2.2.1 None
ERR040137 MDR-TB lineage4.1.1.3 ug
ERR038741 MDR-TB lineage4.2.2.2 ug
ERR10680134 MDR-TB lineage6.2.2 None
ERR040142 MDR-TB lineage4.3.4.2.1 ug
ERR1034816 MDR-TB lineage4.3.4.2.1 pt
ERR1035296 HR-TB lineage4.9 br
ERR11043799 MDR-TB lineage4.8 None
ERR10748216 MDR-TB lineage4.6.1.2 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10748540 MDR-TB lineage4.6.1.2 None
ERR11043212 HR-TB lineage4.1.2.1 None
ERR1193891 HR-TB lineage4.3.4.2.1 sz
ERR11044862 HR-TB lineage4.2.1 None
ERR133981 MDR-TB lineage4.2.1.1 ru
ERR1213858 MDR-TB lineage2.2.1 kr
ERR3273147 MDR-TB lineage2.2.1.1 None
ERR3256222 HR-TB lineage1.2.1.2.1 ph
ERR3324351 MDR-TB lineage4.1.4 None
ERR3639820 MDR-TB lineage4.1.2.1 None
ERR4553681 MDR-TB lineage4.1.1 None
ERR4423615 Pre-XDR-TB lineage4.6.2.2 None
ERR4553680 Pre-XDR-TB lineage4 None
ERR4553506 MDR-TB None
ERR4799394 HR-TB lineage4.2.2.2 in
ERR4796792 MDR-TB lineage4.2.2.2 in
ERR4798030 Pre-XDR-TB lineage1.1.2 in
ERR4811321 Pre-XDR-TB lineage2.2.1 cn
ERR4799985 Pre-XDR-TB lineage2.2.1.1 None
ERR4810795 Pre-XDR-TB lineage2.2.1 None
ERR4810954 MDR-TB lineage2.2.1 cn
ERR4810955 MDR-TB lineage4.5 cn
ERR5866101 MDR-TB lineage4.8 None
ERR4811335 Pre-XDR-TB lineage2.2.1 cn
ERR4811325 Pre-XDR-TB lineage4.2.2 cn
ERR5866102 MDR-TB lineage4.8 None
ERR6358840 MDR-TB lineage4.6.1.2 None
ERR5918141 MDR-TB lineage4.3.2.1 za
ERR6358711 MDR-TB lineage4.6.1.2 None
ERR751562 Pre-XDR-TB lineage4.3.3 pe
ERR6358846 MDR-TB lineage4.6.1.1 None
ERR6359110 MDR-TB lineage4.3.4.2.1 None
ERR718318 HR-TB lineage1.1.1 th
ERR6358848 MDR-TB lineage4.6.1.1 None
ERR6358847 MDR-TB lineage4.6.1.1 None
ERR776661 MDR-TB lineage4.3.2 None