Rv2428 - c.-81C>T


Drug resistance types
0 Sensitive 0 RR-TB 46 HR-TB 136 MDR-TB 53 Pre-XDR-TB 4 XDR-TB 0 Other
lineage Counts
lineage Count
lineage4.2.2.2 8
lineage3 4
lineage2.2.1 68
lineage4.6.1.2 11
lineage4.1.2.1 29
lineage4.5 18
lineage4.7 1
lineage4.3.3 4
lineage4.4.2 7
lineage4.9 7
lineage4.6.1.1 3
lineage3.1.1 2
lineage2.2.2 4
lineage4.4.1.2 1
lineage1.1.3.2 1
lineage4.3.2.1 2
lineage4.1.1 3
lineage2.2.1;lineage4.8 1
lineage4.8 8
lineage4.1.4 3
lineage2.2.1;lineage4.3.3;lineage4.4.1.1 1
lineage4.2.1 1
lineage4.3.4.1 4
lineage2.2.1.1 4
lineage6.2.2 2
lineage4.3.4.2.1 8
lineage1.1.1.1 4
lineage4.1.1.3 2
lineage4.6.2.2 4
lineage4.2.2 2
lineage1.2.1.2.1 2
lineage4.1.2 3
lineage4.4.1.1 2
lineage4.3.2 1
lineage4.1.1.1 4
lineage4.4 1
lineage4 2
lineage4.1 1
lineage1.1.3.3 1
1
lineage1.1.2 1
La3;M.canetti;lineage2.2.1 1
lineage4.2.1.1 1
lineage1.1.1 1
spoligotype Counts
spoligotype Count
None 239
Geographic prevalence
Country level data for this variant is available for 79 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28044334 Pre-XDR-TB lineage4.2.2.2 None
ERR2510401 MDR-TB lineage3 pk
ERR3132088 MDR-TB lineage2.2.1 None
SRR12420310 MDR-TB lineage2.2.1 None
ERR10748216 MDR-TB lineage4.6.1.2 None
ERR2516725 MDR-TB lineage4.1.2.1 nl
SRR6824644 MDR-TB lineage2.2.1 cn
SRR1723935 MDR-TB lineage4.5 cn
SRR671784 Pre-XDR-TB lineage2.2.1 cn
SRR13583419 MDR-TB lineage4.7 None
ERR4813647 Pre-XDR-TB lineage4.3.3 None
SRR6824642 MDR-TB lineage4.4.2 cn
ERR1035296 HR-TB lineage4.9 br
ERR6358847 MDR-TB lineage4.6.1.1 None
ERR9992669 XDR-TB lineage3.1.1 None
SRR6044999 MDR-TB lineage4.1.2.1 gb
ERR11050915 HR-TB lineage4.2.2.2 None
ERR552177 HR-TB lineage2.2.2 None
ERR4829863 MDR-TB lineage4.4.1.2 it
ERR11489026 MDR-TB lineage1.1.3.2 None
ERR2706920 MDR-TB lineage4.6.1.2 cd
ERR5918141 MDR-TB lineage4.3.2.1 za
ERR4827896 HR-TB lineage2.2.1 None
SRR10808440 HR-TB lineage4.1.1 None
ERR4827606 MDR-TB lineage2.2.1;lineage4.8 None
ERR2653200 HR-TB lineage4.8 None
SRR22179513 HR-TB lineage3 None
SRR13583386 HR-TB lineage4.1.4 None
DRR130189 Pre-XDR-TB lineage2.2.1 None
ERR4827859 HR-TB lineage4.8 None
ERR2497891 MDR-TB lineage4.9 None
ERR038741 MDR-TB lineage4.2.2.2 ug
ERR4813672 MDR-TB lineage2.2.1;lineage4.3.3;lineage4.4.1.1 None
ERR11044862 HR-TB lineage4.2.1 None
SRR1723806 MDR-TB lineage2.2.1 cn
ERR2179658 MDR-TB lineage4.5 cn
ERR2884681_ERR2099784 MDR-TB lineage4.1.2.1 None
SRR6930907 MDR-TB lineage2.2.1 None
ERR5866102 MDR-TB lineage4.8 None
SAMN03246659 MDR-TB lineage4.5 cn
ERR6358846 MDR-TB lineage4.6.1.1 None
ERR2497906 MDR-TB lineage4.9 None
ERR2099784 MDR-TB lineage4.1.2.1 None
ERR4810795 Pre-XDR-TB lineage2.2.1 None
SRR3742656 Pre-XDR-TB lineage2.2.1 None
ERR2197000 HR-TB lineage4.2.2.2 None
SRR10040366 Pre-XDR-TB lineage2.2.2 None
SRR11662456 MDR-TB lineage2.2.1 None
ERR2864254 MDR-TB lineage4.3.4.1 pt
ERR2184208 HR-TB lineage4.1.1 pe
ERR4799985 Pre-XDR-TB lineage2.2.1.1 None
ERR4827605 HR-TB lineage4.8 None
SRR10525324 MDR-TB lineage4.8 None
SRR1723883 HR-TB lineage2.2.1 cn
ERR6358711 MDR-TB lineage4.6.1.2 None
SRR20969519 HR-TB lineage2.2.1.1 None
SRR1368335 Pre-XDR-TB lineage2.2.1 None
SRR6824287 MDR-TB lineage2.2.1 cn
ERR10680134 MDR-TB lineage6.2.2 None
ERR751562 Pre-XDR-TB lineage4.3.3 pe
SRR1368334 Pre-XDR-TB lineage2.2.1 None
ERR6359110 MDR-TB lineage4.3.4.2.1 None
ERR176554 HR-TB lineage4.3.4.2.1 mw
SRR15316543 HR-TB lineage2.2.1 None
ERR1193891 HR-TB lineage4.3.4.2.1 sz
ERR4796792 MDR-TB lineage4.2.2.2 in
SAMEA2534464 HR-TB lineage2.2.2 kr
SRR13583390 HR-TB lineage4.1.2.1 None
SRR15316582 MDR-TB lineage4.5 None
ERR552873 MDR-TB lineage2.2.1 None
SRR069993 HR-TB lineage1.1.1.1 None
SRR6824380 MDR-TB lineage2.2.1 cn
ERR3273147 MDR-TB lineage2.2.1.1 None
SRR5486869 MDR-TB lineage4.1.2.1 None
SRR6824531 MDR-TB lineage4.5 cn
ERR4553680 MDR-TB lineage4.1.1.3 None
SRR6511616 MDR-TB lineage4.3.4.1 None
ERR6358840 MDR-TB lineage4.6.1.2 None
SRR069958 HR-TB lineage1.1.1.1 None
ERR2497889 MDR-TB lineage4.9 None
ERR9119622 MDR-TB lineage4.6.2.2 None
ERR4872105 MDR-TB lineage4.1.2.1 None
SRR28045565 Pre-XDR-TB lineage2.2.1 None
SRR28044403 MDR-TB lineage4.2.2.2 None
SRR11662193 MDR-TB lineage2.2.1.1 None
ERR2199989 HR-TB lineage4.3.4.2.1 sz
SRR1368336 Pre-XDR-TB lineage2.2.1 None
ERR552874 MDR-TB lineage2.2.1 None
SRR20969472 Pre-XDR-TB lineage2.2.1 None
SRR25207357 Pre-XDR-TB lineage4.2.2 None
ERR4827577 MDR-TB lineage2.2.1 None
SRR25515647 Pre-XDR-TB lineage2.2.1 None
SRR6824330 MDR-TB lineage4.5 cn
SRR20969758 Pre-XDR-TB lineage2.2.1 None
ERR212122 HR-TB lineage4.3.4.2.1 mw
ERR4811321 XDR-TB lineage2.2.1 cn
ERR4811335 Pre-XDR-TB lineage2.2.1 cn
ERR11081605 MDR-TB lineage4.1.2.1 None
ERR4872228 MDR-TB lineage4.6.2.2 None
ERR4423615 Pre-XDR-TB lineage4.6.2.2 None
SRR6824600 MDR-TB lineage2.2.1 cn
SRR6824331 MDR-TB lineage4.4.2 cn
SRR28119820 HR-TB lineage2.2.1 None
SRR6930922 Pre-XDR-TB lineage4.3.4.1 None
SAMEA104221066 MDR-TB lineage4.1.2.1 es
SRR22250018 HR-TB lineage1.2.1.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR1723948 MDR-TB lineage4.5 None
ERR11043799 MDR-TB lineage4.8 None
SRR1368332 Pre-XDR-TB lineage2.2.1 None
SRR13423594 Pre-XDR-TB lineage2.2.1 None
ERR8774232 Pre-XDR-TB lineage4.6.2.2 None
ERR5866101 MDR-TB lineage4.8 None
SRR15316314 MDR-TB lineage2.2.1 None
SRR10525355 Pre-XDR-TB lineage4.1.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR21277359 HR-TB lineage4.4.2 None
ERR2041771 MDR-TB lineage4.1.2 rs
ERR2652982 HR-TB lineage4.4.1.1 None
SRR17856658 Pre-XDR-TB lineage2.2.1 None
ERR12328150 HR-TB lineage2.2.1 None
SRR21277271 MDR-TB lineage4.4.2 None
ERR1034816 MDR-TB lineage4.3.4.2.1 pt
ERR552872 MDR-TB lineage2.2.1 None
SRR671727 MDR-TB lineage2.2.1 cn
SRR3742655 Pre-XDR-TB lineage2.2.1 None
ERR553208 MDR-TB lineage2.2.1 uz
ERR776661 MDR-TB lineage4.3.2 None
SRR24827295 HR-TB lineage4.1.1.1 None
SRR1013581 Pre-XDR-TB lineage2.2.1 None
SRR25207366 MDR-TB lineage4.5 None
ERR2179653 MDR-TB lineage4.4.2 cn
SRR20632773 Pre-XDR-TB lineage2.2.1 None
ERR10680042 MDR-TB lineage6.2.2 None
SRR15315964 Pre-XDR-TB lineage4.4 None
SRR16149167 MDR-TB lineage4 None
ERR2497886 MDR-TB lineage4.9 None
ERR553226 MDR-TB lineage4.1 None
SRR8237323 MDR-TB lineage2.2.1 np
ERR552873_ERR552872_ERR552874 MDR-TB lineage2.2.1 None
SRR12420650 MDR-TB lineage2.2.1 None
SRR1723651 MDR-TB lineage2.2.1 cn
SRR5709881 MDR-TB lineage2.2.1 th
ERR4813838 Pre-XDR-TB lineage4.1.2.1 None
ERR2935859 HR-TB lineage4.3.4.1 None
SRR11662551 MDR-TB lineage2.2.1 None
ERR11773731 Pre-XDR-TB lineage4.4.1.1 None
SRR28046326 MDR-TB lineage1.1.3.3 None
SRR28646053 MDR-TB lineage4.1.2.1 None
ERR4553681 MDR-TB None
SRR28646056 MDR-TB lineage4.1.2.1 None
ERR2510578 Pre-XDR-TB lineage3 pk
SRR7592363 MDR-TB lineage4.1.2.1 None
ERR2516703 MDR-TB lineage4.1.1 nl
SAMEA2534973 MDR-TB lineage2.2.1 uz
SRR5073939 HR-TB lineage1.1.1.1 vn
ERR2041730 Pre-XDR-TB lineage4.8 rs
SRR19128044 HR-TB lineage4.1.1.1 None
SRR9738535 MDR-TB lineage4.1.2.1 None
ERR11043212 HR-TB lineage4.1.2.1 None
ERR502932 MDR-TB lineage2.2.1 None
SRR3742670 Pre-XDR-TB lineage2.2.1 None
SRR21887785 Pre-XDR-TB lineage2.2.1 None
ERR2497893 MDR-TB lineage4.9 None
ERR6358848 MDR-TB lineage4.6.1.1 None
ERR4798030 XDR-TB lineage1.1.2 in
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3324351 HR-TB lineage4.1.4 None
ERR2707099 MDR-TB lineage4.6.1.2 cd
SRR070023 HR-TB lineage1.1.1.1 None
SRR1723947 MDR-TB lineage4.5 None
ERR2099781 Pre-XDR-TB lineage4.1.2.1 es
ERR1654694 MDR-TB lineage4.6.1.2 None
ERR2099785 MDR-TB lineage4.1.2.1 es
SRR21277270 MDR-TB lineage4.4.2 None
ERR040142 MDR-TB lineage4.3.4.2.1 ug
ERR2099789 MDR-TB lineage4.1.2.1 es
SRR25206927 XDR-TB lineage2.2.1 None
ERR2706993 MDR-TB lineage4.6.1.2 cd
SRR1723993 MDR-TB lineage4.4.2 cn
ERR4813903 Pre-XDR-TB lineage4.1.2.1 None
SRR22179517 HR-TB lineage3 None
SRR15014747 MDR-TB lineage4.2.2.2 None
ERR2707142 MDR-TB lineage4.6.1.2 cd
ERR2984782 Pre-XDR-TB lineage4.3.3 None
ERR9121553 MDR-TB lineage4.1.2.1 None
ERR2515445 MDR-TB lineage4.3.2.1 za
ERR4799394 HR-TB lineage4.2.2.2 in
SRR15506912 Pre-XDR-TB lineage2.2.1 None
ERR2884681 MDR-TB lineage4.1.2.1 None
SRR12420645 MDR-TB lineage2.2.1 None
ERR4810954 MDR-TB lineage2.2.1 cn
ERR2179733 MDR-TB lineage4.5 cn
ERR2707000 MDR-TB lineage4.1.2 cd
ERR2099791 MDR-TB lineage4.1.2.1 es
SRR16370294 HR-TB lineage4.1.1.1 None
SRR15316583 MDR-TB lineage4.5 None
SRR1723906 MDR-TB lineage4.5 cn
ERR1654685 MDR-TB lineage4.6.1.2 None
SRR11972441 MDR-TB lineage2.2.1 None
ERR1213858 MDR-TB lineage2.2.1 kr
SRR5486894 Pre-XDR-TB lineage4.1.2.1 None
ERR9119511 MDR-TB lineage4.1.2.1 None
DRR130164 Pre-XDR-TB lineage2.2.1 None
SRR9613542 MDR-TB lineage4.1.2 None
SRR21277183 HR-TB lineage2.2.1 None
SRR1723672 MDR-TB lineage2.2.1 cn
ERR2497887 MDR-TB lineage4.9 None
SRR3742669 Pre-XDR-TB lineage2.2.1 None
SRR2024993 MDR-TB lineage2.2.1 cn
SRR8651589 Pre-XDR-TB lineage2.2.1 cn
ERR2864237 Pre-XDR-TB lineage4.3.3 pt
SRR13583473 HR-TB lineage4.1.2.1 None
ERR552176 HR-TB lineage2.2.2 None
ERR10748540 MDR-TB lineage4.6.1.2 None
ERR133981 MDR-TB lineage4.2.1.1 ru
ERR2179677 MDR-TB lineage4.5 cn
ERR4810955 MDR-TB lineage4.5 cn
ERR3639820 MDR-TB lineage4.1.2.1 None
ERR4811325 Pre-XDR-TB lineage4.2.2 cn
SRR6824485 MDR-TB lineage4.5 cn
ERR718318 HR-TB lineage1.1.1 th
SRR1723747 MDR-TB lineage2.2.1 None
ERR3256222 HR-TB lineage1.2.1.2.1 ph
ERR2653208 MDR-TB lineage4.1.1.1 None
SRR1368333 Pre-XDR-TB lineage2.2.1 None
ERR2179654 MDR-TB lineage4.5 cn
SRR7592355 Pre-XDR-TB lineage4.1.4 None
SRR13423565 Pre-XDR-TB lineage2.2.1 None
SRR1723900 MDR-TB lineage4.5 cn
ERR4553506 MDR-TB lineage4 None
SRR8651642 Pre-XDR-TB lineage4.5 cn
SRR25206858 MDR-TB lineage2.2.1 None
ERR551253 MDR-TB lineage4.6.1.2 cg
ERR4813831 Pre-XDR-TB lineage4.1.2.1 None
SRR20969817 MDR-TB lineage2.2.1 None
SRR4423143 Pre-XDR-TB lineage4.1.1.3 None
ERR11775054 HR-TB lineage3.1.1 None
SRR28646061 MDR-TB lineage4.1.2.1 None