Rv2428 - c.-81C>T
Drug resistance types
0 Sensitive
0 RR-TB
58 HR-TB
165 MDR-TB
64 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 80 |
| lineage4.8 | 12 |
| lineage4.4.1.1 | 2 |
| lineage4.4 | 1 |
| lineage4.1.2.1 | 40 |
| lineage4.9 | 7 |
| lineage4.6.1.2 | 15 |
| lineage2.2.2 | 5 |
| lineage3.1.1 | 4 |
| lineage4.3.3 | 4 |
| lineage2.2.1.1 | 4 |
| lineage6.2.2 | 2 |
| lineage4.4.2 | 7 |
| lineage4.3.4.2.1 | 8 |
| lineage4.5 | 20 |
| lineage4.1.1.3 | 5 |
| lineage4.1.1 | 3 |
| lineage3 | 6 |
| lineage4.3.4.1 | 5 |
| lineage4.6.1.1 | 3 |
| lineage4.1.1.1 | 5 |
| lineage4.1 | 1 |
| lineage4 | 4 |
| lineage4.1.2 | 4 |
| lineage1.1.1.1 | 4 |
| lineage4.2.2 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.2.2.2 | 9 |
| lineage1.2.1.2.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.4 | 4 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| 1 | |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage4.3.3;lineage4.4.1.1 | 1 |
| lineage4.7 | 3 |
| lineage1.2.1.2 | 1 |
| lineage2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR29055693 | MDR-TB | lineage2.2.1 | None |
| SRR3742670 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6930907 | MDR-TB | lineage2.2.1 | None |
| ERR13285147 | MDR-TB | lineage4.8 | None |
| ERR2652982 | HR-TB | lineage4.4.1.1 | None |
| SRR15315964 | Pre-XDR-TB | lineage4.4 | None |
| SRR29772599 | Pre-XDR-TB | lineage4.1.2.1 | None |
| DRR130164 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1723672 | MDR-TB | lineage2.2.1 | cn |
| SRR20969817 | MDR-TB | lineage2.2.1 | None |
| ERR13289890 | MDR-TB | lineage4.1.2.1 | None |
| ERR2497906 | MDR-TB | lineage4.9 | None |
| ERR552872 | MDR-TB | lineage2.2.1 | None |
| SRR29231793 | MDR-TB | lineage4.6.1.2 | None |
| SRR10040366 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR3742669 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6824380 | MDR-TB | lineage2.2.1 | cn |
| ERR13260735 | HR-TB | lineage3.1.1 | None |
| ERR4827605 | HR-TB | lineage4.8 | None |
| ERR2864237 | Pre-XDR-TB | lineage4.3.3 | pt |
| ERR4811321 | XDR-TB | lineage2.2.1 | cn |
| SRR20969519 | HR-TB | lineage2.2.1.1 | None |
| ERR10680134 | MDR-TB | lineage6.2.2 | None |
| ERR1213858 | MDR-TB | lineage2.2.1 | kr |
| ERR2179653 | MDR-TB | lineage4.4.2 | cn |
| SRR20632773 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR30180246 | MDR-TB | lineage2.2.1 | None |
| ERR6359110 | MDR-TB | lineage4.3.4.2.1 | None |
| ERR4810955 | MDR-TB | lineage4.5 | cn |
| ERR11081608 | MDR-TB | lineage4.1.2.1 | None |
| SRR29385391 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29017192 | Pre-XDR-TB | lineage4.1.1.3 | None |
| SRR15316305 | MDR-TB | lineage2.2.1 | None |
| ERR2516703 | MDR-TB | lineage4.1.1 | nl |
| ERR2510401 | MDR-TB | lineage3 | pk |
| ERR2935859 | HR-TB | lineage4.3.4.1 | None |
| ERR13290920 | MDR-TB | lineage4.5 | None |
| SRR21887785 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2179677 | MDR-TB | lineage4.5 | cn |
| ERR502932 | MDR-TB | lineage2.2.1 | None |
| ERR4827896 | HR-TB | lineage2.2.1 | None |
| ERR6358847 | MDR-TB | lineage4.6.1.1 | None |
| SRR22179517 | HR-TB | lineage3 | None |
| SRR28045565 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2099781 | Pre-XDR-TB | lineage4.1.2.1 | es |
| SRR16370294 | HR-TB | lineage4.1.1.1 | None |
| SRR1723900 | MDR-TB | lineage4.5 | cn |
| ERR553226 | MDR-TB | lineage4.1 | None |
| SRR16149167 | MDR-TB | lineage4 | None |
| ERR11775054 | HR-TB | lineage3.1.1 | None |
| ERR4553680 | MDR-TB | lineage4.1.1.3 | None |
| ERR2041730 | Pre-XDR-TB | lineage4.8 | rs |
| SRR9738535 | MDR-TB | lineage4.1.2.1 | None |
| SRR19128044 | HR-TB | lineage4.1.1.1 | None |
| SRR9613542 | MDR-TB | lineage4.1.2 | None |
| SRR070023 | HR-TB | lineage1.1.1.1 | None |
| SRR25207357 | Pre-XDR-TB | lineage4.2.2 | None |
| ERR2497893 | MDR-TB | lineage4.9 | None |
| ERR4827577 | MDR-TB | lineage2.2.1 | None |
| SRR1723935 | MDR-TB | lineage4.5 | cn |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR212122 | HR-TB | lineage4.3.4.2.1 | mw |
| SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4813647 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR4423615 | Pre-XDR-TB | lineage4.6.2.2 | None |
| SRR21277270 | MDR-TB | lineage4.4.2 | None |
| SRR25206927 | XDR-TB | lineage2.2.1 | None |
| SRR15014747 | MDR-TB | lineage4.2.2.2 | None |
| SRR22250018 | HR-TB | lineage1.2.1.2.1 | None |
| SRR28044403 | MDR-TB | lineage4.2.2.2 | None |
| ERR2515445 | MDR-TB | lineage4.3.2.1 | za |
| SRR29273641 | MDR-TB | lineage4.1.2.1 | None |
| SRR29051262 | HR-TB | lineage4.1.2.1 | None |
| SRR15506912 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR12420645 | MDR-TB | lineage2.2.1 | None |
| ERR4810954 | MDR-TB | lineage2.2.1 | cn |
| ERR1654694 | MDR-TB | lineage4.6.1.2 | None |
| SRR1723993 | MDR-TB | lineage4.4.2 | cn |
| SRR13423594 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29231659 | MDR-TB | lineage4.6.1.2 | None |
| SRR6824531 | MDR-TB | lineage4.5 | cn |
| SRR7592346 | MDR-TB | lineage4.1.2.1 | None |
| SRR29017191 | MDR-TB | lineage4.1.1.3 | None |
| ERR2099784 | MDR-TB | lineage4.1.2.1 | None |
| ERR4810795 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR1034816 | MDR-TB | lineage4.3.4.2.1 | pt |
| ERR11773731 | Pre-XDR-TB | lineage4.4.1.1 | None |
| ERR11044862 | HR-TB | lineage4.2.1 | None |
| ERR2197000 | HR-TB | lineage4.2.2.2 | None |
| ERR2497887 | MDR-TB | lineage4.9 | None |
| SRR29055596 | MDR-TB | lineage2.2.1 | None |
| ERR5918141 | MDR-TB | lineage4.3.2.1 | za |
| SRR29051022 | HR-TB | lineage4.1.4 | None |
| SRR25207366 | MDR-TB | lineage4.5 | None |
| ERR10748540 | MDR-TB | lineage4.6.1.2 | None |
| SRR29274166 | HR-TB | lineage4.1.2.1 | None |
| ERR13267053 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR133981 | MDR-TB | lineage4.2.1.1 | ru |
| ERR4811325 | Pre-XDR-TB | lineage4.2.2 | cn |
| ERR10680042 | MDR-TB | lineage6.2.2 | None |
| SRR29274051 | Pre-XDR-TB | lineage4.8 | None |
| ERR2497886 | MDR-TB | lineage4.9 | None |
| SRR17856658 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2199989 | HR-TB | lineage4.3.4.2.1 | sz |
| SRR8237323 | MDR-TB | lineage2.2.1 | np |
| SRR29273980 | MDR-TB | lineage4.1.2.1 | None |
| SRR15316582 | MDR-TB | lineage4.5 | None |
| ERR552873_ERR552872_ERR552874 | MDR-TB | lineage2.2.1 | None |
| SRR21732671 | HR-TB | lineage3 | None |
| ERR552873 | MDR-TB | lineage2.2.1 | None |
| ERR4872228 | MDR-TB | lineage4.6.2.2 | None |
| ERR6358840 | MDR-TB | lineage4.6.1.2 | None |
| ERR3273147 | MDR-TB | lineage2.2.1.1 | None |
| SRR1368334 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6824485 | MDR-TB | lineage4.5 | cn |
| SRR29273976 | Pre-XDR-TB | lineage4.1.2.1 | None |
| ERR552176 | HR-TB | lineage2.2.2 | None |
| ERR552177 | HR-TB | lineage2.2.2 | None |
| SAMEA2534464 | HR-TB | lineage2.2.2 | kr |
| ERR2497889 | MDR-TB | lineage4.9 | None |
| SRR13583390 | HR-TB | lineage4.1.2.1 | None |
| SRR11662551 | MDR-TB | lineage2.2.1 | None |
| ERR2864254 | MDR-TB | lineage4.3.4.1 | pt |
| ERR718318 | HR-TB | lineage1.1.1 | th |
| SRR10525324 | MDR-TB | lineage4.8 | None |
| ERR4553681 | MDR-TB | None | |
| SRR28646061 | MDR-TB | lineage4.1.2.1 | None |
| ERR2706920 | MDR-TB | lineage4.6.1.2 | cd |
| ERR2707000 | MDR-TB | lineage4.1.2 | cd |
| ERR2707142 | MDR-TB | lineage4.6.1.2 | cd |
| SRR28046326 | MDR-TB | lineage1.1.3.3 | None |
| SRR8651642 | Pre-XDR-TB | lineage4.5 | cn |
| ERR2706993 | MDR-TB | lineage4.6.1.2 | cd |
| ERR751562 | Pre-XDR-TB | lineage4.3.3 | pe |
| SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None |
| SAMEA2534973 | MDR-TB | lineage2.2.1 | uz |
| ERR553208 | MDR-TB | lineage2.2.1 | uz |
| SRR15316543 | HR-TB | lineage2.2.1 | None |
| SRR21277183 | HR-TB | lineage2.2.1 | None |
| SRR25515647 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5866101 | MDR-TB | lineage4.8 | None |
| SRR21277359 | HR-TB | lineage4.4.2 | None |
| ERR3256222 | HR-TB | lineage1.2.1.2.1 | ph |
| ERR10748216 | MDR-TB | lineage4.6.1.2 | None |
| ERR2179654 | MDR-TB | lineage4.5 | cn |
| ERR2041771 | MDR-TB | lineage4.1.2 | rs |
| SRR7592363 | MDR-TB | lineage4.1.2.1 | None |
| ERR1654685 | MDR-TB | lineage4.6.1.2 | None |
| ERR2099789 | MDR-TB | lineage4.1.2.1 | es |
| ERR4799985 | Pre-XDR-TB | lineage2.2.1.1 | None |
| ERR4872105 | MDR-TB | lineage4.1.2.1 | None |
| ERR2179658 | MDR-TB | lineage4.5 | cn |
| ERR11043212 | HR-TB | lineage4.1.2.1 | None |
| ERR552874 | MDR-TB | lineage2.2.1 | None |
| ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None |
| SRR671784 | Pre-XDR-TB | lineage2.2.1 | cn |
| ERR038741 | MDR-TB | lineage4.2.2.2 | ug |
| SRR6824330 | MDR-TB | lineage4.5 | cn |
| ERR3324351 | HR-TB | lineage4.1.4 | None |
| ERR9992669 | XDR-TB | lineage3.1.1 | None |
| SRR671727 | MDR-TB | lineage2.2.1 | cn |
| ERR4813903 | Pre-XDR-TB | lineage4.1.2.1 | None |
| SRR6930922 | Pre-XDR-TB | lineage4.3.4.1 | None |
| ERR11081605 | MDR-TB | lineage4.1.2.1 | None |
| ERR6358846 | MDR-TB | lineage4.6.1.1 | None |
| ERR6358848 | MDR-TB | lineage4.6.1.1 | None |
| ERR11050915 | HR-TB | lineage4.2.2.2 | None |
| ERR9121553 | MDR-TB | lineage4.1.2.1 | None |
| ERR776661 | MDR-TB | lineage4.3.2 | None |
| SRR11662456 | MDR-TB | lineage2.2.1 | None |
| SRR29440993 | HR-TB | lineage2.2.1 | None |
| SRR1723948 | MDR-TB | lineage4.5 | None |
| ERR2884681 | MDR-TB | lineage4.1.2.1 | None |
| SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2179733 | MDR-TB | lineage4.5 | cn |
| SRR10808440 | HR-TB | lineage4.1.1 | None |
| ERR2653200 | HR-TB | lineage4.8 | None |
| SRR1368332 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2099791 | MDR-TB | lineage4.1.2.1 | es |
| SRR13583386 | HR-TB | lineage4.1.4 | None |
| ERR8774232 | Pre-XDR-TB | lineage4.6.2.2 | None |
| SRR1723906 | MDR-TB | lineage4.5 | cn |
| SRR28646056 | MDR-TB | lineage4.1.2.1 | None |
| SRR29093126 | MDR-TB | lineage4 | None |
| SRR29440968 | HR-TB | lineage2.2.1 | None |
| ERR4813672 | MDR-TB | lineage2.2.1;lineage4.3.3;lineage4.4.1.1 | None |
| SRR1723806 | MDR-TB | lineage2.2.1 | cn |
| SRR29055686 | MDR-TB | lineage2.2.1 | None |
| SAMN03246659 | MDR-TB | lineage4.5 | cn |
| SRR11972441 | MDR-TB | lineage2.2.1 | None |
| ERR040137 | MDR-TB | lineage4.1.1.3 | ug |
| ERR2884681_ERR2099784 | MDR-TB | lineage4.1.2.1 | None |
| ERR9119511 | MDR-TB | lineage4.1.2.1 | None |
| SRR26331605 | MDR-TB | lineage3.1.1 | None |
| SRR29051285 | HR-TB | lineage4.3.4.1 | None |
| SRR13583419 | MDR-TB | lineage4.7 | None |
| SRR13583473 | HR-TB | lineage4.1.2.1 | None |
| ERR12328150 | HR-TB | lineage2.2.1 | None |
| ERR4813838 | Pre-XDR-TB | lineage4.1.2.1 | None |
| SRR29053405 | HR-TB | lineage4.1.1.1 | None |
| SRR3742655 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13285103 | MDR-TB | lineage4.1.2.1 | None |
| ERR2497891 | MDR-TB | lineage4.9 | None |
| ERR11043799 | MDR-TB | lineage4.8 | None |
| SRR6824287 | MDR-TB | lineage2.2.1 | cn |
| ERR13291022 | MDR-TB | lineage1.2.1.2 | None |
| SRR29093375 | MDR-TB | lineage4 | None |
| ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
| SRR1723883 | HR-TB | lineage2.2.1 | cn |
| SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR25207011 | MDR-TB | lineage2.2.1 | None |
| ERR13290903 | MDR-TB | lineage2.1 | None |
| ERR3639820 | MDR-TB | lineage4.1.2.1 | None |
| ERR4799394 | HR-TB | lineage4.2.2.2 | in |
| ERR176554 | HR-TB | lineage4.3.4.2.1 | mw |
| SRR1723747 | MDR-TB | lineage2.2.1 | None |
| ERR4796792 | MDR-TB | lineage4.2.2.2 | in |
| SRR3742656 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29050703 | MDR-TB | lineage4.7 | None |
| ERR13259930 | HR-TB | lineage2.2.1 | None |
| ERR3132088 | MDR-TB | lineage2.2.1 | None |
| SRR1368336 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR069993 | HR-TB | lineage1.1.1.1 | None |
| ERR6358711 | MDR-TB | lineage4.6.1.2 | None |
| ERR5866102 | MDR-TB | lineage4.8 | None |
| SRR13423565 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29231671 | MDR-TB | lineage4.6.1.2 | None |
| SRR25206858 | MDR-TB | lineage2.2.1 | None |
| ERR4553506 | MDR-TB | lineage4 | None |
| ERR4798030 | XDR-TB | lineage1.1.2 | in |
| ERR2510578 | Pre-XDR-TB | lineage3 | pk |
| SRR29289317 | HR-TB | lineage3 | None |
| SRR6511616 | MDR-TB | lineage4.3.4.1 | None |
| SRR5709881 | MDR-TB | lineage2.2.1 | th |
| ERR1035296 | HR-TB | lineage4.9 | br |
| SRR069958 | HR-TB | lineage1.1.1.1 | None |
| ERR4813831 | Pre-XDR-TB | lineage4.1.2.1 | None |
| ERR13194049 | MDR-TB | lineage2.2.2 | None |
| SRR28044334 | Pre-XDR-TB | lineage4.2.2.2 | None |
| SRR6824644 | MDR-TB | lineage2.2.1 | cn |
| SRR2024993 | MDR-TB | lineage2.2.1 | cn |
| ERR2707099 | MDR-TB | lineage4.6.1.2 | cd |
| ERR551253 | MDR-TB | lineage4.6.1.2 | cg |
| SRR11662193 | MDR-TB | lineage2.2.1.1 | None |
| SRR5486894 | Pre-XDR-TB | lineage4.1.2.1 | None |
| SRR7592355 | Pre-XDR-TB | lineage4.1.4 | None |
| ERR11489026 | MDR-TB | lineage1.1.3.2 | None |
| SRR8651589 | Pre-XDR-TB | lineage2.2.1 | cn |
| ERR1193891 | HR-TB | lineage4.3.4.2.1 | sz |
| ERR040142 | MDR-TB | lineage4.3.4.2.1 | ug |
| SRR6044999 | MDR-TB | lineage4.1.2.1 | gb |
| ERR4827859 | HR-TB | lineage4.8 | None |
| SRR6824600 | MDR-TB | lineage2.2.1 | cn |
| SRR29050650 | HR-TB | lineage4.1.2.1 | None |
| ERR13262171 | Pre-XDR-TB | lineage4.2.2.2 | None |
| SRR4423143 | Pre-XDR-TB | lineage4.1.1.3 | None |
| SRR28119820 | HR-TB | lineage2.2.1 | None |
| ERR2184208 | HR-TB | lineage4.1.1 | pe |
| SRR20969472 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR24827295 | HR-TB | lineage4.1.1.1 | None |
| SRR12420650 | MDR-TB | lineage2.2.1 | None |
| ERR2099785 | MDR-TB | lineage4.1.2.1 | es |
| SRR1368333 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR9119622 | MDR-TB | lineage4.6.2.2 | None |
| ERR2653208 | MDR-TB | lineage4.1.1.1 | None |
| SRR29231849 | MDR-TB | lineage4.6.1.2 | None |
| SRR29772486 | Pre-XDR-TB | lineage4.8 | None |
| SRR15316583 | MDR-TB | lineage4.5 | None |
| SRR6824642 | MDR-TB | lineage4.4.2 | cn |
| SRR12420310 | MDR-TB | lineage2.2.1 | None |
| ERR2516725 | MDR-TB | lineage4.1.2.1 | nl |
| SAMEA104221066 | MDR-TB | lineage4.1.2.1 | es |
| SRR20969758 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1723947 | MDR-TB | lineage4.5 | None |
| ERR4811335 | Pre-XDR-TB | lineage2.2.1 | cn |
| SRR1723651 | MDR-TB | lineage2.2.1 | cn |
| SRR10525355 | Pre-XDR-TB | lineage4.1.2.1 | None |
| SRR29231557 | MDR-TB | lineage4.1.2 | None |
| ERR4829863 | MDR-TB | lineage4.4.1.2 | it |
| SRR5073939 | HR-TB | lineage1.1.1.1 | vn |
| SRR5486869 | MDR-TB | lineage4.1.2.1 | None |
| SRR28646053 | MDR-TB | lineage4.1.2.1 | None |
| SRR29051229 | MDR-TB | lineage4.7 | None |
| ERR4827606 | MDR-TB | lineage2.2.1;lineage4.8 | None |
| SRR22179513 | HR-TB | lineage3 | None |
| DRR130189 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR21277271 | MDR-TB | lineage4.4.2 | None |
| SRR25207149 | Pre-XDR-TB | lineage4.5 | None |
| SRR15316314 | MDR-TB | lineage2.2.1 | None |
| SRR6824331 | MDR-TB | lineage4.4.2 | cn |
| ERR13266770 | Pre-XDR-TB | lineage4.8 | None |
