Rv2477c - c.1596C>T

Drug resistance types
223 Sensitive 5 RR-TB 5 HR-TB 16 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 13 Other
lineage Counts
lineage Count
lineage2.2.1.2;lineage4.9 73
lineage2.2.1.2 161
M.canetti;lineage2.1;lineage4.9 7
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.9 4
lineage3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.7;M.canetti;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage3 1
lineage2.2.1.2;lineage4.1.1.3 1
1
lineage2.2.2 1
lineage2.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 263
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1223397 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1218519 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1228672 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1214862 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232453 Sensitive lineage2.2.1.2 None
SRR125307 Sensitive lineage2.2.1.2 None
SRR1214428 Sensitive lineage2.2.1.2 None
SRR1222892 Sensitive lineage2.2.1.2;lineage4.9 None
SRR7453055 Sensitive lineage2.2.1.2 None
SRR067524 Sensitive lineage2.2.1.2 None
SRR1222272 Sensitive lineage2.2.1.2 None
SRR125284 Sensitive lineage2.2.1.2 None
SRR067473 Sensitive lineage2.2.1.2 None
SRR067487 Sensitive lineage2.2.1.2 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1221530 Sensitive lineage2.2.1.2 None
SRR7453050 Sensitive lineage2.2.1.2 None
SRR1222555 Sensitive lineage2.2.1.2 None
SRR1232845 Sensitive lineage2.2.1.2 None
SRR17657966 MDR-TB lineage2.2.1.2;lineage4.9 None
SRR070033 Sensitive lineage2.2.1.2 None
SRR1218759 Sensitive lineage2.2.1.2 None
SRR1225524 Sensitive lineage2.2.1.2 None
SRR1214362 Sensitive lineage2.2.1.2 None
SRR1215454 Sensitive lineage2.2.1.2 None
SRR1233241 Sensitive lineage2.2.1.2 None
SRR1229393 Sensitive lineage2.2.1.2;lineage4.9 None
SRR125305 Sensitive lineage2.2.1.2 None
SRR1214269 Sensitive lineage2.2.1.2 None
SRR1223360 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220555 Sensitive lineage2.2.1.2 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1221484 Sensitive lineage2.2.1.2 None
SRR28389892 Sensitive lineage2.2.1.2 None
SRR23080331 Sensitive lineage2.2.1.2 None
SRR28409533 Sensitive lineage2.2.1.2 None
SRR23080326 Sensitive lineage2.2.1.2 None
SRR1187296 Sensitive lineage2.2.1.2 ca
SRR7453056 Sensitive lineage2.2.1.2 None
SRR1214592 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223103 Sensitive lineage2.2.1.2;lineage4.9 None
SRR069916 Sensitive lineage2.2.1.2 None
SRR1232418 Sensitive lineage2.2.1.2 None
SRR1218219 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1200811 Sensitive lineage2.2.1.2 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1218976 Sensitive lineage2.2.1.2 None
SRR7453033 Sensitive lineage2.2.1.2 None
SRR1227219 Sensitive lineage2.2.1.2 None
SRR1232670 Sensitive lineage2.2.1.2;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1213994 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1221663 Sensitive lineage2.2.1.2;lineage4.9 None
SRR070030 Sensitive lineage2.2.1.2 None
SRR1222409 Sensitive lineage2.2.1.2 None
SRR1227420 Sensitive lineage2.2.1.2 None
SRR1214217 Sensitive lineage2.2.1.2 None
ERR4821053 RR-TB lineage3 None
SRR17658034 Other lineage2.2.1.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1227278 Sensitive lineage2.2.1.2 None
SRR1220372 Sensitive lineage2.2.1.2 None
SRR069925 Sensitive lineage2.2.1.2 None
SRR1220592 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1225399 Sensitive lineage2.2.1.2 None
SRR1213934 Sensitive lineage2.2.1.2 None
SRR1219251 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1222964 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1218820 Sensitive lineage2.2.1.2 None
SRR1214599 Sensitive lineage2.2.1.2 None
SRR17657989 Other lineage2.2.1.2 None
SRR067522 Sensitive lineage2.2.1.2 None
SRR7249139 Sensitive lineage2.2.1.2 None
SRR1232802 Sensitive lineage2.2.1.2 None
SRR1232294 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1231768 Sensitive lineage2.2.1.2 None
SRR1231429 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1222938 Sensitive lineage2.2.1.2 None
SRR6046593 Other lineage4.9 None
SRR1223935 Sensitive lineage2.2.1.2 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1232107 Sensitive lineage2.2.1.2 None
SRR1229205 Sensitive lineage2.2.1.2;lineage4.9 None
SRR069968 Sensitive lineage2.2.1.2 None
SRR1219197 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1215291 Sensitive lineage2.2.1.2 None
SRR1232975 Sensitive lineage2.2.1.2 None
SRR067523 Sensitive lineage2.2.1.2 None
SRR17657972 Other lineage2.2.1.2 None
SRR17657988 Other lineage2.2.1.2 None
SRR1230630 Sensitive lineage2.2.1.2 None
SRR1223105 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1229965 Sensitive lineage2.2.1.2;lineage4.9 None
SRR067533 Sensitive lineage2.2.1.2 None
SRR7453054 Sensitive lineage2.2.1.2 None
SRR1231683 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1219957 Sensitive lineage2.2.1.2 None
SRR1221249 Sensitive lineage2.2.1.2 None
SRR1222267 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1233285 Sensitive lineage2.2.1.2;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1232039 Sensitive lineage2.2.1.2 None
SRR1214891 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232801 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1224427 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232972 Sensitive lineage2.2.1.2 None
SRR6930915 RR-TB lineage2.2.1.2 None
SRR1231650 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220599 Sensitive lineage2.2.1.2;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1215356 Sensitive lineage2.2.1.2 None
SRR6045053 Other lineage4 None
SRR1231759 Sensitive lineage2.2.1.2 None
SRR16057873 Sensitive lineage2.2.1.2 None
SRR1224570 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1224569 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223329 Sensitive lineage2.2.1.2 None
SRR1231823 Sensitive lineage2.2.1.2;lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
SRR1220271 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220275 Sensitive lineage2.2.1.2 None
SRR1232684 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1215298 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223102 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1233661 Sensitive lineage2.2.1.2 None
SRR1231596 Sensitive lineage2.2.1.2 None
SRR1222559 Sensitive lineage2.2.1.2 None
ERR9125759 Sensitive lineage2.2.1.2 None
SRR1214318 Sensitive lineage2.2.1.2 None
SRR125289 Sensitive lineage2.2.1.2 None
SRR1216248 Sensitive lineage2.2.1.2 None
SRR1232986 Sensitive lineage2.2.1.2 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR24799211 Sensitive lineage2.2.1.2 None
SRR1224550 Sensitive lineage2.2.1.2 None
SRR1221314 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220268 Sensitive lineage2.2.1.2 None
SRR1231647 Sensitive lineage2.2.1.2 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1222931 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1216240 Sensitive lineage2.2.1.2 None
SRR1221631 Sensitive lineage2.2.1.2 None
SRR067538 Sensitive lineage2.2.1.2 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1221257 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223536 Sensitive lineage2.2.1.2 None
SRR1223350 Sensitive lineage2.2.1.2 None
SRR1223377 Sensitive lineage2.2.1.2 None
SRR6045347 Other lineage4.9 None
SRR1220283 Sensitive lineage2.2.1.2;lineage4.9 None
SRR070003 Sensitive lineage2.2.1.2 None
SRR7453031 Sensitive lineage2.2.1.2 None
SRR1221199 Sensitive lineage2.2.1.2 None
SRR1214007 Sensitive lineage2.2.1.2 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR1218948 Sensitive lineage2.2.1.2 None
SRR17657995 Sensitive lineage2.2.1.2 None
SRR1220278 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1231775 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1218526 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232985 Sensitive lineage2.2.1.2 None
SRR067515 Sensitive lineage2.2.1.2 None
SRR1216189 Sensitive lineage2.2.1.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1219071 Sensitive lineage2.2.1.2 None
SRR1218622 Sensitive lineage2.2.1.2 None
SRR1224958 Sensitive lineage2.2.1.2 None
ERR4010964 Sensitive lineage2.2.1.2 None
SRR069917 Sensitive lineage2.2.1.2 None
SRR1200797 Sensitive lineage2.2.1.2 None
SRR1224536 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232618 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223150 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1231687 Sensitive lineage2.2.1.2 None
SRR1219074 Sensitive lineage2.2.1.2;lineage4.9 None
SRR125300 Sensitive lineage2.2.1.2 None
SRR1221679 Sensitive lineage2.2.1.2 None
SRR1229538 Sensitive lineage2.2.1.2 None
SRR1213999 Sensitive lineage2.2.1.2 None
SRR8441985 Sensitive lineage2.2.1.2 None
SRR1219133 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1219066 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1231437 Sensitive lineage2.2.1.2 None
SRR17658001 Sensitive lineage2.2.1.2 None
SRR067557 Sensitive lineage2.2.1.2 None
SRR1221544 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220003 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1231604 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1233512 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1218879 Sensitive lineage2.2.1.2 None
SRR1214469 Sensitive lineage2.2.1.2 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1218610 Sensitive lineage2.2.1.2;lineage4.9 None
SRR069959 RR-TB lineage2.2.1.2 None
SRR1218922 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1220280 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1229387 Sensitive lineage2.2.1.2 None
SRR069940 Sensitive lineage2.2.1.2 None
SRR1222646 Sensitive lineage2.2.1.2 None
SRR1228976 Sensitive lineage2.2.1.2;lineage4.9 None
SRR28389832 Other lineage2.2.1.2 None
SRR28389884 Pre-XDR-TB lineage2.2.1.2;lineage4.1.1.3 None
SRR28389823 Other lineage2.2.1.2 None
ERR212001 HR-TB None
SRR067491 Sensitive lineage2.2.1.2 None
SRR1220973 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232955 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1233673 Sensitive lineage2.2.1.2 None
SRR1223203 Sensitive lineage2.2.1.2;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1229204 Sensitive lineage2.2.1.2 None
SRR1216242 Sensitive lineage2.2.1.2 None
SRR069978 HR-TB lineage2.2.2 None
SRR1218891 Sensitive lineage2.2.1.2 None
SRR7453049 Sensitive lineage2.2.1.2 None
SRR1230656 Sensitive lineage2.2.1.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1220602 Sensitive lineage2.2.1.2 None
SRR067554 Sensitive lineage2.2.1.2 None
SRR1218962 Sensitive lineage2.2.1.2;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1233643 Sensitive lineage2.2.1.2;lineage4.9 None
SRR069914 Sensitive lineage2.2.1.2 None
SRR1214899 Sensitive lineage2.2.1.2 None
SRR067498 Sensitive lineage2.2.1.2 None
SRR1219166 Sensitive lineage2.2.1.2 None
SRR1224858 Sensitive lineage2.2.1.2 None
SRR7453034 Sensitive lineage2.2.1.2 None
SRR1218606 Sensitive lineage2.2.1.2;lineage4.9 None
SRR070015 RR-TB lineage2.2.1.2 None
SRR1219254 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1214746 Sensitive lineage2.2.1.2 None
SRR069985 Sensitive lineage2.2.1.2 None
SRR1214929 Sensitive lineage2.2.1.2 None
SRR9625175 Sensitive lineage2.2.1.2 None
SRR1222224 Sensitive lineage2.2.1.2;lineage4.9 None
SRR069974 Sensitive lineage2.2.1.2 None
SRR1225204 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1217289 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1224560 Sensitive lineage2.2.1.2 None
SRR067520 Sensitive lineage2.2.1.2 None
SRR1223462 Sensitive lineage2.2.1.2 None
SRR1221462 Sensitive lineage2.2.1.2 None
SRR1222333 Sensitive lineage2.2.1.2 None
ERR4813656 HR-TB lineage4 None
SRR1224426 Sensitive lineage2.2.1.2 None
SRR1229415 Sensitive lineage2.2.1.2 None
SRR7453032 Sensitive lineage2.2.1.2 None
SRR17657961 Other lineage2.2.1.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR069971 RR-TB lineage2.2.1.2 None
SRR1220963 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1215559 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1232429 Sensitive lineage2.2.1.2 None
SRR1233311 Sensitive lineage2.2.1.2 None
SRR1233260 Sensitive lineage2.2.1.2 None
SRR1215531 Sensitive lineage2.2.1.2;lineage4.9 None
SRR1223381 Sensitive lineage2.2.1.2 None
SRR16089688 Sensitive lineage2.2.1.2 None
SRR21657202 Sensitive lineage2.2.1.2 None
SRR1220197 Sensitive lineage2.2.1.2 None