lineage | Count |
---|---|
50 | |
lineage4 | 3 |
lineage4.8 | 18 |
lineage3.1.1 | 13 |
lineage3 | 1 |
lineage2.2.1 | 7 |
lineage4.1.1 | 1 |
lineage5.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.2.1 | 1 |
La2 | 1 |
lineage3.1.2 | 1 |
lineage2.2.1.1 | 2 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | ERR181744 | HR-TB | None | ERR176740 | HR-TB | None | ERR1949966 | Sensitive | lineage4 | None | ERR2228954 | Sensitive | lineage4.8 | None | SRR3675550 | Other | None | ERR1949968 | Sensitive | lineage4.8 | dk | ERR1949978 | Sensitive | lineage4.8 | dk | ERR1949982 | Other | lineage4.8 | None | ERR1949972 | Sensitive | lineage4.8 | None | ERR1949986 | Sensitive | lineage4.8 | None | ERR1949992 | Other | lineage4.8 | None | ERR1950004 | HR-TB | lineage4 | None | ERR1950011 | Sensitive | lineage4.8 | None | ERR2228789 | Sensitive | lineage4.8 | None | ERR212034 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | ERR2228809 | Sensitive | lineage4.8 | None | ERR2228796 | Sensitive | lineage4.8 | None | ERR2228836 | Sensitive | lineage4.8 | None | ERR2245288 | Sensitive | lineage3.1.1 | no | ERR2228828 | Other | lineage4.8 | None | ERR2228887 | Sensitive | lineage4.8 | dk | ERR2228925 | Sensitive | lineage4.8 | dk | ERR2228884 | Sensitive | lineage4.8 | dk | ERR2228906 | Sensitive | lineage4.8 | None | ERR2245342 | RR-TB | lineage3.1.1 | no | ERR2245334 | Sensitive | lineage3.1.1 | None | ERR2245297 | Sensitive | lineage3.1.1 | no | ERR2245302 | HR-TB | lineage3.1.1 | no | ERR2245347 | Sensitive | lineage3.1.1 | no | ERR2245346 | HR-TB | lineage3.1.1 | no | ERR2245343 | Sensitive | lineage3.1.1 | no | ERR2245351 | Sensitive | lineage3 | None | ERR2245357 | Sensitive | lineage3.1.1 | None | ERR2245362 | Sensitive | no | ERR2245350 | Other | lineage3.1.1 | no | ERR2245352 | RR-TB | lineage3.1.1 | no | ERR2245360 | Sensitive | lineage3.1.1 | None | SRR5341418 | Other | None | ERR2245364 | Other | lineage3.1.1 | no | SRR5341313 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR4820112 | Sensitive | lineage4.1.1 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | SRR6045327 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | ERR3170397 | Sensitive | lineage5.1.1 | None | SRR6369875 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785285 | MDR-TB | lineage2.2.1 | None | SRR6785188 | Other | lineage4.1.2 | None | SRR6785187 | Sensitive | lineage4.2.1 | None | SRR6785338 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | La2 | None | SRR6785429 | Other | lineage2.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283036 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR1034652 | Other | None | ERR1194804 | Other | lineage2.2.1 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3439432 | Other | None | ERR3797044 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR4811142 | MDR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | SRR1174897 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | SRR1173629 | Other | None | ERR7910933 | MDR-TB | lineage2.2.1 | md | SRR1180147 | Other | lineage2.2.1.1 | None | SRR19303884 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | ERR158583 | HR-TB | None |
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