Rv3261 - c.-332T>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
74 Sensitive
1 RR-TB
10 HR-TB
67 MDR-TB
389 Pre-XDR-TB
26 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 537 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.2;lineage2.2.1 | 3 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2.2.1;lineage3 | 9 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage3.1.2 | 2 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 1 |
| lineage2.2.1.1;lineage3;lineage4 | 2 |
| lineage2.2.1;lineage4 | 3 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage4 | 1 |
| lineage1.1.2;lineage2 | 1 |
| lineage2.2.1;lineage4.1.1.3 | 2 |
| lineage1.2.2.2;lineage2.2.1 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.1.1;lineage4.3.3 | 1 |
| lineage5.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 573 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351165 | Pre-XDR-TB | lineage2.2.1 | None | ERR9124944 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162984 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | ERR4800513 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827721 | Pre-XDR-TB | lineage2.2.1 | None | ERR9125282 | MDR-TB | lineage2.2.1 | None | SRR22137480 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058382 | MDR-TB | lineage2.2.1 | None | SRR16097550 | Sensitive | lineage2.2.1 | None | ERR8773613 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830951 | Pre-XDR-TB | lineage2.2.1 | np | SRR22424786 | MDR-TB | lineage2.2.1 | None | ERR11044474 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732180 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044450 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045218 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819250 | Sensitive | lineage2.2.1 | None | SRR7069519 | Sensitive | lineage2.2.1 | None | ERR13261247 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261468 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231400 | HR-TB | lineage2.2.1 | None | ERR13272791 | Sensitive | lineage2.2.1 | None | ERR551520 | Sensitive | lineage2.2.1 | None | ERR13266910 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261383 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162974 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261530 | Pre-XDR-TB | lineage2.2.1 | None | SRR29053012 | Sensitive | lineage2.2.1 | None | ERR13276139 | MDR-TB | lineage2.2.1 | None | SRR1163483 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267023 | MDR-TB | lineage2.2.1 | None | SRR28045933 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261281 | MDR-TB | lineage2.2.1 | None | ERR13290587 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049611 | Sensitive | lineage4.1.2 | None | ERR13261496 | HR-TB | lineage1.1.2;lineage2.2.1 | None | ERR13261240 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249678 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267614 | Sensitive | lineage2.2.1 | None | ERR13266879 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262091 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265943 | Sensitive | lineage2.2.1 | None | SRR22251221 | Other | lineage2.2.1 | None | SRR16058135 | Sensitive | lineage2.2.1 | None | ERR13261218 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798402 | Pre-XDR-TB | lineage2.2.1 | None | SRR22250005 | Sensitive | lineage2.2.1 | None | SRR29772705 | Pre-XDR-TB | lineage2.2.1 | None | SRR22250233 | Sensitive | lineage2.2.1 | None | ERR13290870 | Pre-XDR-TB | lineage2.2.1 | None | SRR29356683 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044429 | MDR-TB | lineage2.2.1 | None | SRR29441127 | Sensitive | lineage2.2.1 | None | ERR13266444 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267746 | HR-TB | lineage2.2.1 | None | SRR25827568 | Pre-XDR-TB | lineage2.2.1 | None | SRR18897161 | Pre-XDR-TB | lineage2.2.1 | None | ERR9124984 | Sensitive | lineage2.2.1 | None | SRR7070032 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340777 | MDR-TB | lineage2.2.1 | None | SRR18149468 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827769 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR13266810 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827623 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045192 | Sensitive | lineage2.2.1 | None | ERR4797957 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827412 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797981 | MDR-TB | lineage2.2.1 | in | ERR4796513 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796522 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798665 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798090 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796397 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796831 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798698 | MDR-TB | lineage2.2.1 | in | ERR4796891 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796944 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266602 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798888 | Other | lineage2.2.1 | in | ERR4796585 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797124 | MDR-TB | lineage2.2.1 | in | ERR4797162 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798133 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797208 | MDR-TB | lineage2.2.1 | in | ERR4797266 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797288 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796636 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797323 | MDR-TB | lineage2.2.1 | in | ERR4796672 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798174 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796706 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797428 | MDR-TB | lineage2.2.1 | in | ERR4797426 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797459 | MDR-TB | lineage2.2.1 | in | ERR4796723 | MDR-TB | lineage2.2.1 | in | ERR4796711 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797523 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797555 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798260 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797754 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796839 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797824 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797856 | XDR-TB | lineage2.2.1 | in | SRR7517689 | Pre-XDR-TB | lineage2.2.1 | None | ERR551519 | Sensitive | lineage2.2.1 | None | ERR4796404 | XDR-TB | lineage2.2.1 | in | ERR4797329 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797268 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798563 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799077 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799556 | MDR-TB | lineage2.2.1 | in | ERR4799991 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799302 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800477 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800381 | XDR-TB | lineage2.2.1 | in | SRR1163462 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796917 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797525 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830917 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830918 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830919 | Pre-XDR-TB | lineage2.2.1 | np | SRR22175206 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267113 | Pre-XDR-TB | lineage2.2.1 | None | ERR12311970 | Pre-XDR-TB | lineage2.2.1 | None | SRR21709336 | Sensitive | lineage2.2.1 | None | ERR13291803 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827458 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13266930 | XDR-TB | lineage2.2.1 | None | SRR22251163 | Sensitive | lineage2.2.1 | None | SRR30182802 | Other | lineage2.2.1 | None | SRR22137415 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261986 | HR-TB | lineage2.2.1 | None | SRR29772691 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016755 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266051 | Pre-XDR-TB | lineage2.2.1 | None | SRR10513832 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266595 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260963 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266887 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827305 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772593 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827768 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage4 | None | ERR13267111 | Pre-XDR-TB | lineage2.2.1 | None | SRR21732485 | Sensitive | lineage2.2.1 | None | ERR13267029 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081558 | Sensitive | lineage2.2.1 | None | ERR9117756 | Sensitive | lineage2.2.1 | None | ERR13265825 | Sensitive | lineage2.2.1 | None | SRR28868609 | Sensitive | lineage2.2.1 | None | ERR13266685 | HR-TB | lineage2.2.1;lineage3.1.2 | None | SRR25827796 | MDR-TB | lineage2.2.1 | None | SRR25827617 | XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3 | None | SRR22251177 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796686 | MDR-TB | lineage2.2.1 | None | ERR13292058 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772801 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267066 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267022 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261158 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261145 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251713 | Sensitive | lineage2.2.1 | None | ERR13262096 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827700 | XDR-TB | lineage2.2.1 | None | SRR28044337 | Pre-XDR-TB | lineage2.2.1 | None | SRR18912991 | Sensitive | lineage2.2.1 | None | SRR25827717 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | SRR28046122 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267132 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827626 | MDR-TB | lineage2.2.1 | None | ERR13266648 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291612 | Sensitive | lineage2.2.1 | None | ERR13267092 | Other | lineage1.1.2;lineage2.2.1 | None | SRR22175253 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261278 | MDR-TB | lineage2.2.1 | None | ERR11044239 | Sensitive | lineage2.2.1 | None | ERR13262124 | Pre-XDR-TB | lineage2.2.1 | None | SRR22249518 | Sensitive | lineage2.2.1 | None | SRR22137411 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251490 | MDR-TB | lineage2.2.1 | None | SRR25827374 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13266419 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827440 | XDR-TB | lineage2.2.1;lineage3 | None | ERR13261355 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827297 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR13262064 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827690 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267121 | Pre-XDR-TB | lineage2.2.1 | None | ERR12796611 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044827 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045568 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800286 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267026 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262165 | XDR-TB | lineage2.2.1 | None | ERR13266836 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772703 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261341 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231481 | Pre-XDR-TB | lineage2.2.1 | None | SRR29127033 | Sensitive | lineage2.2.1 | None | SRR7068977 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266039 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266560 | XDR-TB | lineage2.2.1 | None | ERR13266861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796371 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798037 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796415 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796377 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796602 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798082 | MDR-TB | lineage2.2.1 | in | ERR4796758 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796780 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796808 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796543 | MDR-TB | lineage2.2.1 | in | ERR4796579 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798693 | Pre-XDR-TB | lineage2.2.1 | in | ERR13267131 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798689 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798775 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797192 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | in | ERR4798900 | MDR-TB | lineage2.2.1 | in | ERR4798948 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798950 | Pre-XDR-TB | lineage2.2.1 | in | SRR16058275 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797340 | MDR-TB | lineage2.2.1 | in | ERR4798798 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799398 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797489 | MDR-TB | lineage2.2.1 | in | ERR4797516 | Pre-XDR-TB | lineage2.2.1 | in | SRR30182627 | Sensitive | lineage2.2.1 | None | ERR4799806 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799807 | MDR-TB | lineage2.2.1 | in | ERR4797563 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797629 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266661 | XDR-TB | lineage2.2.1 | None | ERR4799888 | XDR-TB | lineage2.2.1;lineage3 | in | ERR4799885 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799986 | HR-TB | lineage4 | in | ERR4800000 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800067 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797751 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797722 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797808 | XDR-TB | lineage2.2.1 | in | SRR30182419 | Sensitive | lineage2.2.1 | None | ERR4800425 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798963 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797859 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800546 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800558 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798585 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797115 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798930 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799035 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797199 | Pre-XDR-TB | lineage2.2.1 | in | SRR25340861 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798894 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797284 | Pre-XDR-TB | lineage1.1.2;lineage2 | in | ERR13292126 | Sensitive | lineage2.2.1 | None | ERR4797399 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799468 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799584 | XDR-TB | lineage2.2.1 | in | ERR4799568 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799608 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799616 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799697 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799724 | MDR-TB | lineage2.2.1 | in | ERR13261154 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799755 | Other | lineage2.2.1 | in | ERR4797564 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799877 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799971 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261077 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799026 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800213 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799564 | MDR-TB | lineage2.2.1 | in | ERR4799063 | MDR-TB | lineage2.2.1 | in | ERR4800402 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800465 | MDR-TB | lineage2.2.1 | in | ERR13267005 | XDR-TB | lineage2.2.1 | None | ERR4800512 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800560 | Pre-XDR-TB | lineage2.2.1 | in | SRR22251896 | Sensitive | lineage2.2.1 | None | ERR13266724 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517090 | MDR-TB | lineage2.2.1 | gb | ERR13260980 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266842 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045189 | Sensitive | lineage2.2.1 | None | SRR25827638 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SAMN02414964 | Pre-XDR-TB | lineage2.2.1 | se | SRR28044819 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045263 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800672 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420474 | MDR-TB | lineage2.2.1 | None | SRR22137422 | Pre-XDR-TB | lineage2.2.1 | None | SRR28409551 | Sensitive | lineage2.2.1 | None | SRR28045005 | Sensitive | lineage2.2.1 | None | SRR22424821 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827567 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797044 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798187 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798304 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798787 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799815 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799027 | HR-TB | lineage2.2.1 | in | ERR8773615 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797363 | XDR-TB | lineage2.2.1 | in | ERR4797090 | Pre-XDR-TB | lineage2.2.1 | in | ERR4830657 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830969 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830976 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830991 | Pre-XDR-TB | lineage2.2.1 | np | ERR13266936 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291866 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137465 | Pre-XDR-TB | lineage2.2.1 | None | SRR16103913 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420362 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827306 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR16100710 | Pre-XDR-TB | lineage2.2.1 | None | SRR18593229 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251675 | Sensitive | lineage2.2.1;lineage3 | None | SRR1165376 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772382 | Pre-XDR-TB | lineage2.2.1 | None | ERR7162980 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266962 | MDR-TB | lineage2.2.1 | None | ERR13290588 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137420 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827463 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | SRR22424812 | MDR-TB | lineage2.2.1 | None | ERR13292144 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266601 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR28858522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800144 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR13261306 | MDR-TB | lineage2.2.1 | None | ERR4796421 | MDR-TB | lineage2.2.1 | None | ERR13266084 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424798 | Pre-XDR-TB | lineage2.2.1 | None | SRR21658625 | Sensitive | lineage2.2.1 | None | ERR11082896 | Sensitive | lineage2.2.1 | None | ERR13261974 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827741 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265868 | Sensitive | lineage2.2.1 | None | ERR13266947 | XDR-TB | lineage2.2.1 | None | ERR4800653 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261546 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182511 | Sensitive | lineage2.2.1 | None | ERR13266538 | Pre-XDR-TB | lineage2.2.1 | None | SRR29230723 | MDR-TB | lineage2.2.1 | None | ERR13266426 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424794 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290586 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231636 | Sensitive | lineage2.2.1 | None | ERR4800166 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772731 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016820 | MDR-TB | lineage2.2.1 | None | ERR4797922 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796879 | MDR-TB | lineage2.2.1 | in | ERR4796898 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797992 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796922 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798307 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798202 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798393 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797082 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798483 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797113 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797097 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1 | in | ERR4798550 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797132 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798892 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797174 | MDR-TB | lineage1.2.2.2;lineage2.2.1 | in | ERR4799159 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799255 | Pre-XDR-TB | lineage2.2.1 | in | ERR13265238 | Sensitive | lineage2.2.1 | None | ERR4799341 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797502 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266574 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799498 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799632 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799690 | XDR-TB | lineage2.2.1 | in | ERR4797596 | Pre-XDR-TB | lineage2.2.1 | in | ERR13267116 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167138 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262105 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797811 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797878 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799860 | MDR-TB | lineage2.2.1 | in | ERR4830163 | MDR-TB | lineage2.2.1 | tj | ERR13266631 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797968 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800335 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799217 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796533 | MDR-TB | lineage2.2.1 | in | ERR4796601 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799419 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796633 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798621 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798663 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796763 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798677 | XDR-TB | lineage2.2.1 | in | SRR8380932 | MDR-TB | lineage2.2.1 | in | ERR4796936 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796940 | Pre-XDR-TB | lineage2.2.1 | in | ERR13261966 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796960 | MDR-TB | lineage2.2.1;lineage3 | in | ERR4798780 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798814 | MDR-TB | lineage2.2.1 | in | ERR4797051 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799523 | XDR-TB | lineage2.2.1 | in | ERR13290856 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799979 | HR-TB | lineage2.2.1 | in | ERR4800248 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800304 | Pre-XDR-TB | lineage2.2.1 | in | SRR29055792 | Sensitive | lineage2.2.1 | None | ERR13261374 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043428 | Sensitive | lineage2.2.1 | None | ERR4796420 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827561 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR28351435 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830901 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830914 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830924 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830925 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830928 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830933 | Pre-XDR-TB | lineage2.2.1 | np | SRR28351583 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830949 | Pre-XDR-TB | lineage2.2.1 | np | SRR28046140 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351193 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830995 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830997 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831066 | MDR-TB | lineage2.2.1 | np | SRR25827635 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | SRR6153185 | Sensitive | lineage2.2.1 | ca | ERR4830929 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830936 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831081 | MDR-TB | lineage2.2.1 | np | ERR4830915 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830938 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830942 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830985 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830998 | Pre-XDR-TB | lineage2.2.1 | np | ERR4800347 | XDR-TB | lineage2.2.1 | None | SRR28045925 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516770 | MDR-TB | lineage2.2.1 | gb | ERR2516198 | Pre-XDR-TB | lineage2.2.1 | be | ERR4814280 | Pre-XDR-TB | lineage2.2.1 | gb | ERR4818464 | Pre-XDR-TB | lineage2.2.1 | gb | SRR8237319 | Sensitive | lineage2.2.1 | np | SRR8237313 | Sensitive | lineage2.2.1 | np | SRR8237317 | MDR-TB | lineage2.2.1 | np | SRR8237345 | Sensitive | lineage2.2.1 | np | SRR8237396 | Sensitive | lineage2.2.1 | ch | SRR8237309 | MDR-TB | lineage2.2.1 | np | SRR8237314 | Sensitive | lineage2.2.1 | np | SRR8237330 | Sensitive | lineage2.2.1 | np | SRR22175242 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182389 | Sensitive | lineage1.2.1.2.1 | None | ERR13261528 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267115 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261151 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175225 | XDR-TB | lineage2.2.1 | None | SRR22251075 | Sensitive | lineage2.2.1 | None | SRR22137434 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827740 | Pre-XDR-TB | lineage2.2.1.1;lineage3;lineage4 | None | SRR25827848 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR28046128 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800632 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069307 | Sensitive | lineage2.2.1 | None | ERR2513950 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2513951 | Sensitive | lineage2.2.1 | gb | ERR10465997 | Sensitive | lineage2.2.1 | None | SRR25827779 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR25827756 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868806 | Sensitive | lineage2.2.1 | None | ERR13291791 | Sensitive | lineage2.2.1 | None | SRR27450137 | Sensitive | lineage2.2.1 | None | SRR16100248 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553937 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044565 | MDR-TB | lineage2.2.1 | None | ERR11080904 | Sensitive | lineage2.2.1 | None | SRR25827413 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR28351573 | XDR-TB | lineage2.2.1 | None | ERR7162981 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266739 | Pre-XDR-TB | lineage2.2.1 | None | SRR30182673 | Sensitive | lineage2.2.1 | None | SRR25827656 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800583 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1.3 | None | ERR4799132 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827831 | MDR-TB | lineage2.2.1 | None | ERR4798902 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799675 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800439 | Pre-XDR-TB | lineage2.2.1 | in | ERR13266783 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798116 | MDR-TB | lineage2.2.1 | in | ERR13276145 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290589 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799701 | MDR-TB | lineage2.2.1 | in | ERR11068484 | MDR-TB | lineage2.2.1 | None | ERR11044310 | HR-TB | lineage2.2.1 | None | ERR4799316 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799355 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798403 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799415 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799409 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798498 | MDR-TB | lineage2.2.1 | in | ERR4796441 | Pre-XDR-TB | lineage2.2.1 | in | SRR21728159 | Sensitive | lineage2.2.1 | None | SRR25827490 | XDR-TB | lineage2.2.1 | None | ERR4800682 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231198 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722061 | Sensitive | lineage2.2.1 | None | ERR7162985 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351326 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351425 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045282 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069078 | Sensitive | lineage2.2.1 | None | SRR28351478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830926 | Pre-XDR-TB | lineage2.2.1 | np | SRR28045539 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830935 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830937 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830939 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830971 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830974 | Pre-XDR-TB | lineage2.2.1 | np | SRR28351271 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831011 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831010 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831028 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831030 | Sensitive | lineage2.2.1 | np | SRR28351489 | MDR-TB | lineage2.2.1 | None | SRR28045761 | Sensitive | lineage2.2.1 | None | SRR28351547 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553676 | RR-TB | lineage2.2.1 | None | ERR11049313 | Other | lineage2.2.1 | None | ERR4830905 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830911 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830912 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830987 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831009 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830660 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830903 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831016 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831026 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831020 | Pre-XDR-TB | lineage2.2.1 | np | ERR4831027 | Pre-XDR-TB | lineage2.2.1 | np | ERR7162973 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2533997 | Sensitive | lineage2.2.1 | np | SRR7585440 | Sensitive | lineage2.2.1 | in | ERR2517038 | MDR-TB | lineage2.2.1 | gb | ERR4816871 | HR-TB | lineage2.2.1 | gb | ERR4821008 | Sensitive | lineage2.2.1 | gb | ERR2514362 | Sensitive | lineage2.2.1 | gb | ERR4800597 | Pre-XDR-TB | lineage2.2.1 | None | SRR21657635 | Sensitive | lineage2.2.1 | None | SRR25827705 | MDR-TB | lineage2.2.1.1;lineage4.3.3 | None | ERR13261480 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262163 | XDR-TB | lineage2.2.1 | None | ERR4818630 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827588 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044898 | MDR-TB | lineage2.2.1 | None | ERR2704812 | MDR-TB | lineage5.2 | fr | SRR28045664 | MDR-TB | lineage2.2.1 | None | SRR28351477 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827417 | Pre-XDR-TB | lineage2.2.1;lineage4.9 | None | ERR13262046 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13266790 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292435 | Sensitive | lineage2.2.1 | None | SRR7517819 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827516 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081560 | Sensitive | lineage2.2.1 | None |
|---|
