Rv3261 - c.432T>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
12 HR-TB
103 MDR-TB
25 Pre-XDR-TB
1 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 130 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| 1 | |
| lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 147 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29273978 | MDR-TB | lineage4.8 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR29273830 | MDR-TB | lineage4.8 | None | ERR13264963 | MDR-TB | lineage4.8 | None | ERR11081829 | MDR-TB | lineage4.8 | None | SRR29273744 | MDR-TB | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR29274078 | MDR-TB | lineage4.8 | None | SRR29273639 | MDR-TB | lineage4.8 | None | SRR9738494 | MDR-TB | lineage4.8 | None | SRR29274183 | MDR-TB | lineage4.8 | None | SRR29274010 | MDR-TB | lineage4.8 | None | SRR9738495 | MDR-TB | lineage4.8 | None | SRR29274058 | MDR-TB | lineage4.8 | None | SRR29273687 | MDR-TB | lineage4.8 | None | ERR4828908 | MDR-TB | lineage4.8 | None | ERR4829382 | MDR-TB | lineage4.8 | it | ERR2510724 | Pre-XDR-TB | lineage4.8 | it | SRR9738532 | Pre-XDR-TB | lineage4.8 | None | SRR3085319 | MDR-TB | lineage4.8 | None | ERR11082580 | MDR-TB | lineage4.8 | None | ERR2516340 | MDR-TB | lineage4.8 | be | ERR2516282 | MDR-TB | lineage4.8 | be | ERR2516251 | MDR-TB | lineage4.8 | be | ERR2516167 | MDR-TB | lineage4.8 | be | SRR29273718 | MDR-TB | lineage4.8 | None | SRR29273708 | MDR-TB | lineage4.8 | None | SRR29274075 | MDR-TB | lineage4.8 | None | ERR3639724 | MDR-TB | lineage4.8 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR28646109 | MDR-TB | lineage4.8 | None | SRR28646098 | Pre-XDR-TB | lineage4.8 | None | ERR3639713 | MDR-TB | lineage4.8 | None | ERR11044067 | MDR-TB | lineage4.8 | None | ERR11049462 | MDR-TB | lineage4.8 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR3086352 | MDR-TB | lineage4.8 | None | ERR4829854 | Pre-XDR-TB | lineage4.8 | it | ERR2516281 | MDR-TB | lineage4.8 | be | ERR4828998 | MDR-TB | lineage4.8 | it | ERR3639725 | MDR-TB | lineage4.8 | None | ERR11069098 | Pre-XDR-TB | lineage4.8 | None | SRR10525332 | MDR-TB | lineage4.8 | None | SRR29274026 | MDR-TB | lineage4.8 | None | ERR6358991 | HR-TB | None | SRR29274192 | MDR-TB | lineage4.8 | None | SRR29273634 | Pre-XDR-TB | lineage4.8 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29274114 | MDR-TB | lineage4.8 | None | SRR29273966 | MDR-TB | lineage4.8 | None | SRR29273925 | MDR-TB | lineage4.8 | None | SRR29273821 | MDR-TB | lineage4.8 | None | SRR5486888 | Pre-XDR-TB | lineage4.8 | None | ERR1163050 | MDR-TB | lineage4.8 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5486874 | MDR-TB | lineage4.8 | None | SRR5486900 | MDR-TB | lineage4.8 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR29273936 | MDR-TB | lineage4.8 | None | SRR29273842 | Pre-XDR-TB | lineage4.8 | None | SRR1166220 | MDR-TB | lineage4.8 | ro | SRR3085301 | Pre-XDR-TB | lineage4.8 | None | ERR4828775 | MDR-TB | lineage4.8 | it | ERR4828830 | MDR-TB | lineage4.8 | None | ERR4828818 | MDR-TB | lineage4.8 | None | SRR7592327 | MDR-TB | lineage4.8 | None | ERR11082006 | MDR-TB | lineage4.8 | None | ERR2516582 | MDR-TB | lineage4.8 | nl | ERR2510730 | Pre-XDR-TB | lineage4.8 | it | ERR2510824 | MDR-TB | lineage4.8 | it | SRR3086372 | Pre-XDR-TB | lineage4.8 | None | ERR2510823 | MDR-TB | lineage4.8 | it | SRR7592359 | Pre-XDR-TB | lineage4.8 | None | SRR9738480 | MDR-TB | lineage4.8 | None | SRR29273769 | MDR-TB | lineage4.8 | None | SRR29273741 | MDR-TB | lineage4.8 | None | ERR11049382 | MDR-TB | lineage4.8 | None | SRR29273621 | MDR-TB | lineage4.8 | None | SRR29126572 | HR-TB | lineage4.8 | None | ERR3639782 | Pre-XDR-TB | lineage4.8 | None | SRR29273974 | MDR-TB | lineage4.8 | None | ERR1163059 | MDR-TB | lineage4.8 | None | SRR29273948 | MDR-TB | lineage4.8 | None | SRR29274124 | Pre-XDR-TB | lineage4.8 | None | SRR29274137 | MDR-TB | lineage4.8 | None | SRR29274214 | Pre-XDR-TB | lineage4.8 | None | SRR29273997 | MDR-TB | lineage4.8 | None | SRR29273836 | MDR-TB | lineage4.8 | None | SRR29273828 | MDR-TB | lineage4.8 | None | SRR29273754 | MDR-TB | lineage4.8 | None | SRR29274088 | MDR-TB | lineage4.8 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR5486883 | MDR-TB | lineage4.8 | None | ERR13285138 | MDR-TB | lineage4.8 | None | SRR29273840 | Pre-XDR-TB | lineage4.8 | None | SRR29273937 | MDR-TB | lineage4.8 | None | SRR29273867 | MDR-TB | lineage4.8 | None | SRR29273734 | MDR-TB | lineage4.8 | None | ERR13285179 | MDR-TB | lineage4.8 | None | SRR29274149 | Pre-XDR-TB | lineage4.8 | None | SRR29273614 | MDR-TB | lineage4.8 | None | ERR4831207 | MDR-TB | lineage4.8 | de | ERR3283018 | HR-TB | lineage4.9 | None | SRR29273725 | MDR-TB | lineage4.8 | None | SRR28646100 | MDR-TB | lineage4.8 | None | ERR4828928 | MDR-TB | lineage4.8 | None | ERR11082005 | MDR-TB | lineage4.8 | None | SRR9738503 | MDR-TB | lineage4.8 | None | SRR9738496 | MDR-TB | lineage4.8 | None | ERR11043557 | MDR-TB | lineage4.8 | None | SRR7592370 | MDR-TB | lineage4.8 | None | SRR24466789 | MDR-TB | lineage4.8 | None | SRR29273775 | MDR-TB | lineage4.8 | None | SRR10525349 | Pre-XDR-TB | lineage4.8 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3148057 | MDR-TB | lineage4.8 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR4829313 | XDR-TB | lineage4.8 | None | ERR2510852 | MDR-TB | lineage4.8 | it | SRR10525359 | MDR-TB | lineage4.8 | None | ERR2510725 | Pre-XDR-TB | lineage4.8 | it | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR24466788 | MDR-TB | lineage4.8 | None | SRR29273664 | MDR-TB | lineage4.8 | None | SRR9738499 | Pre-XDR-TB | lineage4.8 | None | SRR29273777 | Pre-XDR-TB | lineage4.8 | None | ERR13284141 | Pre-XDR-TB | lineage4.8 | None | ERR3148056 | MDR-TB | lineage4.8 | None | SRR29274159 | Pre-XDR-TB | lineage4.8 | None | SRR29273991 | MDR-TB | lineage4.8 | None | SRR29274157 | Pre-XDR-TB | lineage4.8 | None | ERR11081831 | MDR-TB | lineage4.8 | None | SRR9738512 | MDR-TB | lineage4.8 | None | SRR29273870 | MDR-TB | lineage4.8 | None | ERR11081830 | MDR-TB | lineage4.8 | None | SRR3085260 | MDR-TB | lineage4.8 | None | SRR29273636 | MDR-TB | lineage4.8 | None | ERR11082829 | MDR-TB | lineage4.8 | None | SRR29273747 | MDR-TB | lineage4.8 | None | SRR29274193 | MDR-TB | lineage4.8 | None | SRR7592364 | Pre-XDR-TB | lineage4.8 | None | SRR7592365 | MDR-TB | lineage4.8 | None | SRR9738537 | MDR-TB | lineage4.8 | None |
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