Rv3696c - c.103_105delCACinsGG
Drug resistance types
0 Sensitive
1 RR-TB
5 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9 | 4 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| 2 | |
| lineage4.9 | 4 |
| lineage2.1 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1 | 1 |
| La3 | 1 |
| lineage4.8.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 27 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR212001 | HR-TB | None | SRR1196583 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR28119805 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None |
|---|
