lineage | Count |
---|---|
3 | |
lineage4.9 | 2 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
lineage2.1;lineage4.9 | 3 |
La3;lineage1.1.2 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
La3 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
La3;lineage4.8 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
La3;lineage2.1;lineage4.9 | 2 |
M.canetti;lineage4.9 | 1 |
lineage2.2.1;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage4.9 | 2 |
M.canetti;lineage4.2 | 1 |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
lineage4.3.4.2.1 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage4.1.1.1 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 30 |
ID | Drug resistance | Lineage | Country iso2 | ERR2514692 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR25827682 | Other | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None |
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