Rv3793 - c.1476C>G
Drug resistance types
53 Sensitive
1 RR-TB
29 HR-TB
90 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1;lineage4.8 | 1 |
| lineage2.2.1 | 160 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 8 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| 2 | |
| lineage2.2.1;lineage3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 194 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR22249538 | Sensitive | lineage2.2.1 | None | SRR12080317 | MDR-TB | lineage2.2.1 | None | ERR13265724 | Sensitive | lineage2.2.1 | None | SRR29055500 | Sensitive | lineage2.2.1 | None | SRR12080324 | MDR-TB | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2509883 | Other | lineage2.2.1 | gb | SRR12080314 | MDR-TB | lineage2.2.1 | None | SRR12080287 | MDR-TB | lineage2.2.1 | None | ERR8773589 | MDR-TB | lineage2.2.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR233375 | Sensitive | lineage2.2.1 | None | ERR4831038 | Sensitive | lineage2.2.1 | np | ERR13265186 | Sensitive | lineage2.2.1 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12080275 | MDR-TB | lineage2.2.1 | None | SRR12080274 | MDR-TB | lineage2.2.1 | None | SRR30182662 | HR-TB | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR12080309 | MDR-TB | lineage2.2.1 | None | ERR4797244 | Sensitive | lineage2.2.1 | in | SRR12080302 | MDR-TB | lineage2.2.1 | None | SRR12080281 | MDR-TB | lineage2.2.1 | None | SRR12080319 | MDR-TB | lineage2.2.1 | None | SRR30182445 | Sensitive | lineage2.2.1 | None | SRR12080301 | MDR-TB | lineage2.2.1 | None | SRR12080270 | MDR-TB | lineage2.2.1 | None | SRR12080338 | MDR-TB | lineage2.2.1 | None | SRR12080334 | MDR-TB | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR28044659 | MDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR28044666 | XDR-TB | lineage2.2.1 | None | SRR28045250 | Pre-XDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR28045025 | MDR-TB | lineage2.2.1 | None | ERR4797217 | Pre-XDR-TB | lineage2.2.1 | in | SRR27450251 | Sensitive | lineage2.2.1 | None | SRR28044431 | HR-TB | lineage2.2.1 | None | SRR8237377 | Sensitive | lineage2.2.1 | ch | SRR21733168 | HR-TB | lineage2.2.1 | None | SRR22251366 | Sensitive | lineage2.2.1 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR28044765 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080292 | MDR-TB | lineage2.2.1 | None | ERR4797002 | Sensitive | lineage2.2.1 | in | SRR12080285 | MDR-TB | lineage2.2.1 | None | SRR12080318 | MDR-TB | lineage2.2.1 | None | ERR4820377 | Sensitive | lineage2.2.1 | gb | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12080337 | MDR-TB | lineage2.2.1 | None | SRR12080316 | MDR-TB | lineage2.2.1 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21732993 | HR-TB | lineage2.2.1 | None | SRR25827763 | Other | lineage2.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR13266212 | Sensitive | lineage2.2.1 | None | ERR13265069 | Sensitive | lineage2.2.1 | None | SRR21732776 | Sensitive | lineage2.2.1 | None | SRR30182764 | Sensitive | lineage2.2.1 | None | ERR13265996 | Sensitive | lineage2.2.1 | None | SRR30182410 | Other | lineage2.2.1 | None | ERR13266294 | Sensitive | lineage2.2.1 | None | ERR13265202 | Sensitive | lineage2.2.1 | None | SRR12080336 | MDR-TB | lineage2.2.1 | None | SRR30182850 | Sensitive | lineage2.2.1 | None | SRR12080331 | MDR-TB | lineage2.2.1 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR27241222 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265529 | Sensitive | lineage2.2.1 | None | SRR21732824 | Sensitive | lineage2.2.1 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR13265597 | Sensitive | lineage2.2.1 | None | SRR12080342 | MDR-TB | lineage2.2.1 | None | SRR12080344 | HR-TB | lineage2.2.1 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR12080282 | MDR-TB | lineage2.2.1 | None | SRR12080280 | MDR-TB | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR22251085 | Sensitive | lineage2.2.1 | None | SRR3675236 | Other | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12080322 | MDR-TB | lineage2.2.1 | None | SRR28351265 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13265725 | Sensitive | lineage2.2.1 | None | SRR8237304 | HR-TB | lineage2.2.1 | np | SRR15465779 | MDR-TB | lineage2.2.1 | None | SRR28045249 | Pre-XDR-TB | lineage2.2.1 | None | ERR13265869 | Sensitive | lineage2.2.1 | None | SRR17856648 | Sensitive | lineage2.2.1 | None | SRR12080326 | MDR-TB | lineage2.2.1 | None | SRR12080341 | MDR-TB | lineage2.2.1 | None | SRR22137407 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080290 | MDR-TB | lineage2.2.1 | None | SRR8237323 | MDR-TB | lineage2.2.1 | np | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12080284 | MDR-TB | lineage2.2.1 | None | ERR8773591 | MDR-TB | lineage2.2.1 | None | SRR12080335 | MDR-TB | lineage2.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR2516823 | MDR-TB | lineage2.2.1 | gb | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28046041 | MDR-TB | lineage2.2.1 | None | SRR28170745 | Sensitive | lineage2.2.1 | None | SRR12080297 | MDR-TB | lineage2.2.1 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR12080307 | MDR-TB | lineage2.2.1 | None | SRR12080312 | MDR-TB | lineage2.2.1 | None | SRR22249635 | Sensitive | lineage2.2.1 | None | SRR12080298 | MDR-TB | lineage2.2.1 | None | SRR12080269 | HR-TB | lineage2.2.1 | None | SRR12080279 | MDR-TB | lineage2.2.1 | None | SRR12080288 | HR-TB | lineage2.2.1 | None | SRR12080333 | MDR-TB | lineage2.2.1 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3105738 | HR-TB | lineage2.2.1 | None | ERR4797241 | Sensitive | lineage2.2.1 | in | SRR12080308 | MDR-TB | lineage2.2.1 | None | SRR12080315 | MDR-TB | lineage2.2.1 | None | SRR12080325 | MDR-TB | lineage2.2.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR12080289 | MDR-TB | lineage2.2.1 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11068796 | Sensitive | lineage2.2.1 | None | SRR12080268 | MDR-TB | lineage2.2.1 | None | ERR13265063 | MDR-TB | lineage2.2.1 | None | SRR12080295 | MDR-TB | lineage2.2.1 | None | SRR12080313 | MDR-TB | lineage2.2.1 | None | SRR12080343 | HR-TB | lineage2.2.1 | None | SRR12080311 | MDR-TB | lineage2.2.1 | None | SRR12080299 | HR-TB | lineage2.2.1 | None | SRR12080330 | MDR-TB | lineage2.2.1 | None | SRR21714039 | Sensitive | lineage2.2.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR12080340 | MDR-TB | lineage2.2.1 | None | ERR13266288 | Sensitive | lineage2.2.1 | None | ERR13266208 | Sensitive | lineage2.2.1 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR9892002 | Sensitive | lineage2.2.1 | None | ERR2514226 | Sensitive | lineage2.2.1 | gb | SRR12080306 | MDR-TB | lineage2.2.1 | None | SRR30182370 | Sensitive | lineage2.2.1 | None | SRR12080304 | MDR-TB | lineage2.2.1 | None | SRR26112695 | Sensitive | lineage2.2.1 | None | SRR12080283 | MDR-TB | lineage2.2.1 | None | SRR12080286 | MDR-TB | lineage2.2.1 | None | ERR13265883 | Sensitive | lineage2.2.1 | None | ERR4800690 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080300 | MDR-TB | lineage2.2.1 | None | SRR12080320 | MDR-TB | lineage2.2.1 | None | SRR12080272 | MDR-TB | lineage2.2.1 | None | SRR12080329 | MDR-TB | lineage2.2.1 | None | ERR13265860 | Sensitive | lineage2.2.1 | None | SRR12080328 | MDR-TB | lineage2.2.1 | None | ERR13266014 | Sensitive | lineage2.2.1 | None | ERR13266324 | Sensitive | lineage2.2.1 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR28868738 | Sensitive | lineage2.2.1 | None | SRR8237326 | HR-TB | lineage2.2.1 | np | SRR15364436 | HR-TB | lineage2.2.1 | None | SRR12080323 | MDR-TB | lineage2.2.1 | None | SRR22249502 | Sensitive | lineage2.2.1 | None | SRR12080296 | MDR-TB | lineage2.2.1 | None | SRR12080291 | MDR-TB | lineage2.2.1 | None | SRR7069418 | Sensitive | lineage2.2.1 | None | ERR9786843 | Other | None | SRR12080276 | MDR-TB | lineage2.2.1 | None | SRR12080277 | HR-TB | lineage2.2.1 | None | SRR12080310 | HR-TB | lineage2.2.1 | None | SRR12080294 | MDR-TB | lineage2.2.1 | None | SRR28860141 | MDR-TB | lineage2.2.1 | None | ERR13265651 | Sensitive | lineage2.2.1 | None | SRR8237332 | HR-TB | lineage2.2.1 | np | ERR13266365 | Sensitive | lineage2.2.1 | None | SRR12080332 | HR-TB | lineage2.2.1 | None | SRR12080293 | MDR-TB | lineage2.2.1 | None | SRR12080273 | MDR-TB | lineage2.2.1 | None | ERR13265105 | Sensitive | lineage2.2.1 | None | SRR12080327 | MDR-TB | lineage2.2.1 | None | SRR12080303 | MDR-TB | lineage2.2.1 | None | SRR12080339 | MDR-TB | lineage2.2.1 | None | SRR12080305 | MDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR21732802 | Sensitive | lineage2.2.1 | None | SRR28045579 | Pre-XDR-TB | lineage2.2.1 | None | SRR12080278 | MDR-TB | lineage2.2.1 | None | SRR12080271 | MDR-TB | lineage2.2.1 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR11043912 | Sensitive | lineage2.2.1 | None | ERR13265095 | Sensitive | lineage2.2.1 | None | ERR13265969 | Sensitive | lineage2.2.1 | None |
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