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SRA data
Rv3794
- c.1488C>T
Drug resistance types
5 Sensitive
0 RR-TB
5 HR-TB
1 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1.1
3
La1.7;lineage4.9;lineage7
2
M.canetti;lineage2.2.2;lineage6.2
2
M.canetti;lineage2.2
2
lineage2.1;lineage4.9
1
M.canetti;lineage1
1
La1.7;lineage3;lineage4.9;lineage7
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
1
M.canetti;lineage4.9;lineage9
1
lineage4.9;lineage6.3
1
Showing 1 to 10 of 11 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR4831545
XDR-TB
M.canetti;lineage2.2
None
ERR4831546
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR6358991
HR-TB
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
None
ERR7911670
XDR-TB
M.canetti;lineage2.2
None
SRR15014655
Other
M.canetti;lineage1
None
Showing 1 to 10 of 16 entries
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