Rv3794 - c.1687_1689delCTCinsTTG
Drug resistance types
0 Sensitive
0 RR-TB
57 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| 58 | |
| lineage4.9 | 2 |
| lineage3 | 1 |
| lineage4 | 4 |
| lineage2.2 | 2 |
| lineage3.1 | 2 |
| lineage6.1.3 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 1 |
| lineage4.3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045555 | HR-TB | None | SRR5341418 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR2693239 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | SRR6045952 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046046 | Other | None | SRR6045053 | Other | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046492 | Other | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | ERR5311090 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502889 | Other | None | ERR323041 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3439432 | Other | None | ERR3283021 | HR-TB | None | ERR9786843 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1169249 | Other | La3 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1169306 | Other | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675270 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR176751 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675545 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR1035162 | Other | None |
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